RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 CD3GP09693 182 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 CD1BP29016 333 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 GNG10P50151 68 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 ZNF134P52741 427 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 ZNF137PP52743 207 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 EFNB2P52799 333 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 OR10A3P58181 314 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 BLCAPP62952 87 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 EBI3Q14213 229 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 HABP2Q14520 560 aaPredicted RBP7.34□□□□□ -1.23
CAPN3-219ENST00000569136 HERPUD1Q15011 391 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 HMGN3Q15651 99 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 SRSF7Q16629 238 aaKnown RBP eCLIP7.34□□□□□ -1.23
CAPN3-219ENST00000569136 CT45A1Q5HYN5 189 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 UTF1Q5T230 341 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 MOB3BQ86TA1 216 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 TMEM219Q86XT9 240 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 PRR18Q8N4B5 295 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 DRAM1Q8N682 238 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 OR8H1Q8NGG4 311 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 OR10R2Q8NGX6 335 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 CT45A3Q8NHU0 189 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 ST6GALNAC6Q969X2 333 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 ARHGAP5-AS1Q96IT6 56 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 CMSS1Q9BQ75 279 aaKnown RBP7.34□□□□□ -1.23
CAPN3-219ENST00000569136 CHCHD6Q9BRQ6 235 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 PECRQ9BY49 303 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 C12orf4Q9NQ89 552 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 AK3Q9UIJ7 227 aa7.34□□□□□ -1.23
CAPN3-219ENST00000569136 FBN3Q75N90 2809 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 IGHV3-43A0A0B4J1X8 118 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 IGHV1-3A0A0C4DH29 117 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 A0A1W2PPE3 182 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 TRDCB7Z8K6 153 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 RAB27BO00194 218 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 HSD17B6O14756 317 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 LANCL1O43813 399 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 DIRAS3O95661 229 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 IGHV3-43DP0DP04 118 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 VSIG10L2P0DP72 767 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 ZBTB25P24278 435 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 SDC2P34741 201 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 TALDO1P37837 337 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 SERPINB10P48595 397 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 PITPNAQ00169 270 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 KIR2DS1Q14954 304 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 PLAC9Q5JTB6 97 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 TGIF2LXQ8IUE1 241 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 ZNF439Q8NDP4 499 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 OR2AK2Q8NG84 335 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 OR52L2PQ8NGH6 319 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 OR2T10Q8NGZ9 312 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 SETD6Q8TBK2 473 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 RTN4IP1Q8WWV3 396 aaPredicted RBP7.33□□□□□ -1.24
CAPN3-219ENST00000569136 SLC25A33Q9BSK2 321 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 OR51E2Q9H255 320 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 ZNF702PQ9H963 129 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 Q9N2K0 584 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 PIPOXQ9P0Z9 390 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 WNK1Q9H4A3 2382 aa7.33□□□□□ -1.24
CAPN3-219ENST00000569136 A0A0A6YYH2 397 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 LOC100506127A0A0U1RQW1 187 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 A0A1W2PPI3 338 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 A6NJ64 397 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 TRIM64CA6NLI5 447 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 RAB29O14966 203 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 HSPA12AO43301 675 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 FGF16O43320 207 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 AIREO43918 545 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 MOSP00540 346 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 SNRNP70P08621 437 aaKnown RBP7.32□□□□□ -1.24
CAPN3-219ENST00000569136 TMEM11P17152 192 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 CD24P25063 80 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 RPS19P39019 145 aaKnown RBP7.32□□□□□ -1.24
CAPN3-219ENST00000569136 CEACAM6P40199 344 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 HES1Q14469 280 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 CDNFQ49AH0 187 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 SFXN4Q6P4A7 337 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 IZUMO1Q8IYV9 350 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 LYG1Q8N1E2 194 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 OR10V1Q8NGI7 309 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 OR4A4PQ8NGN8 299 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 OR56B4Q8NH76 319 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 UBALD1Q8TB05 177 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 IL1F10Q8WWZ1 152 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 PHF21AQ96BD5 680 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 GPHA2Q96T91 129 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 S1PR3Q99500 378 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 ABHD14AQ9BUJ0 271 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 ATG5Q9H1Y0 275 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 DCSTAMPQ9H295 470 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 KCNK15Q9H427 330 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 SLC23A1Q9UHI7 598 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 DAPK2Q9UIK4 370 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 SIGLEC9Q9Y336 463 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 ETV7Q9Y603 341 aa7.32□□□□□ -1.24
CAPN3-219ENST00000569136 IGKV1D-33P01593 117 aa7.31□□□□□ -1.24
CAPN3-219ENST00000569136 IGKV1-33P01594 117 aa7.31□□□□□ -1.24
CAPN3-219ENST00000569136 CTXN2P0C2S0 81 aa7.31□□□□□ -1.24
CAPN3-219ENST00000569136 SLC2A2P11168 524 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms