RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 RIMS4Q9H426 269 aaPredicted RBP14.57□□□□□ -0.08
LINC01238-205ENST00000567549 VSIG4Q9Y279 399 aa14.57□□□□□ -0.08
LINC01238-205ENST00000567549 H3BMQ9 156 aa14.56□□□□□ -0.08
LINC01238-205ENST00000567549 SLC22A1O15245 554 aa14.56□□□□□ -0.08
LINC01238-205ENST00000567549 GABARAPO95166 117 aa14.56□□□□□ -0.08
LINC01238-205ENST00000567549 SLC2A2P11168 524 aaPredicted RBP14.56□□□□□ -0.08
LINC01238-205ENST00000567549 CD40LGP29965 261 aa14.56□□□□□ -0.08
LINC01238-205ENST00000567549 TPBGQ13641 420 aa14.56□□□□□ -0.08
LINC01238-205ENST00000567549 NKAPLQ5M9Q1 402 aa14.56□□□□□ -0.08
LINC01238-205ENST00000567549 LIN54Q6MZP7 749 aa14.56□□□□□ -0.08
LINC01238-205ENST00000567549 C11orf87Q6NUJ2 197 aa14.56□□□□□ -0.08
LINC01238-205ENST00000567549 OR11H1Q8NG94 326 aa14.56□□□□□ -0.08
LINC01238-205ENST00000567549 HSPB9Q9BQS6 159 aa14.56□□□□□ -0.08
LINC01238-205ENST00000567549 OR51J1Q9H342 316 aa14.56□□□□□ -0.08
LINC01238-205ENST00000567549 CHMP1AQ9HD42 196 aaPredicted RBP14.56□□□□□ -0.08
LINC01238-205ENST00000567549 RNF150Q9ULK6 438 aa14.56□□□□□ -0.08
LINC01238-205ENST00000567549 TRAV41A0A0B4J266 112 aa14.55□□□□□ -0.08
LINC01238-205ENST00000567549 ZNF736B4DX44 427 aaPredicted RBP14.55□□□□□ -0.08
LINC01238-205ENST00000567549 RAB29O14966 203 aa14.55□□□□□ -0.08
LINC01238-205ENST00000567549 BPNT1O95861 308 aa14.55□□□□□ -0.08
LINC01238-205ENST00000567549 CPEP16870 476 aa14.55□□□□□ -0.08
LINC01238-205ENST00000567549 MC5RP33032 325 aa14.55□□□□□ -0.08
LINC01238-205ENST00000567549 PPP1CCP36873 323 aaKnown RBP14.55□□□□□ -0.08
LINC01238-205ENST00000567549 ECI1P42126 302 aa14.55□□□□□ -0.08
LINC01238-205ENST00000567549 RUNX1Q01196 453 aa14.55□□□□□ -0.08
LINC01238-205ENST00000567549 ZNF616Q08AN1 781 aa14.55□□□□□ -0.08
LINC01238-205ENST00000567549 TMEM267Q0VDI3 215 aaPredicted RBP14.55□□□□□ -0.08
LINC01238-205ENST00000567549 FHL3Q13643 280 aa14.55□□□□□ -0.08
LINC01238-205ENST00000567549 DEFB136Q30KP8 78 aa14.55□□□□□ -0.08
LINC01238-205ENST00000567549 FAM27D1Q5T7N8 215 aa14.55□□□□□ -0.08
LINC01238-205ENST00000567549 PYHIN1Q6K0P9 492 aa14.55□□□□□ -0.08
LINC01238-205ENST00000567549 MRPL30Q8TCC3 161 aaKnown RBP14.55□□□□□ -0.08
LINC01238-205ENST00000567549 FAM46BQ96A09 425 aa14.55□□□□□ -0.08
LINC01238-205ENST00000567549 PARP11Q9NR21 331 aa14.55□□□□□ -0.08
LINC01238-205ENST00000567549 OR5H14A6NHG9 310 aa14.54□□□□□ -0.08
LINC01238-205ENST00000567549 AIREO43918 545 aa14.54□□□□□ -0.08
LINC01238-205ENST00000567549 RBBP9O75884 186 aa14.54□□□□□ -0.08
LINC01238-205ENST00000567549 PSMA1P25786 263 aaKnown RBP14.54□□□□□ -0.08
LINC01238-205ENST00000567549 LUMP51884 338 aaPredicted RBP14.54□□□□□ -0.08
LINC01238-205ENST00000567549 PLGLAQ15195 96 aa14.54□□□□□ -0.08
LINC01238-205ENST00000567549 CTF1Q16619 201 aa14.54□□□□□ -0.08
LINC01238-205ENST00000567549 C5orf64Q2M2E5 130 aa14.54□□□□□ -0.08
LINC01238-205ENST00000567549 ZNF260Q3ZCT1 412 aa14.54□□□□□ -0.08
LINC01238-205ENST00000567549 ZNF833PQ6ZTB9 187 aa14.54□□□□□ -0.08
LINC01238-205ENST00000567549 OR52L2PQ8NGH6 319 aa14.54□□□□□ -0.08
LINC01238-205ENST00000567549 EDARADDQ8WWZ3 215 aa14.54□□□□□ -0.08
LINC01238-205ENST00000567549 UFD1Q92890 307 aa14.54□□□□□ -0.08
LINC01238-205ENST00000567549 TSC22D3Q99576 134 aa14.54□□□□□ -0.08
LINC01238-205ENST00000567549 NABP2Q9BQ15 211 aa14.54□□□□□ -0.08
LINC01238-205ENST00000567549 URM1Q9BTM9 101 aaKnown RBP14.54□□□□□ -0.08
LINC01238-205ENST00000567549 NAA50Q9GZZ1 169 aaKnown RBP14.54□□□□□ -0.08
LINC01238-205ENST00000567549 ZNF256Q9Y2P7 627 aaPredicted RBP14.54□□□□□ -0.08
LINC01238-205ENST00000567549 U3KQK5 164 aa14.54□□□□□ -0.08
LINC01238-205ENST00000567549 ARPC1BO15143 372 aaKnown RBP14.53□□□□□ -0.08
LINC01238-205ENST00000567549 CHATP28329 748 aa14.53□□□□□ -0.08
LINC01238-205ENST00000567549 RPS27AP62979 156 aaKnown RBP14.53□□□□□ -0.08
LINC01238-205ENST00000567549 HMGN3Q15651 99 aa14.53□□□□□ -0.08
LINC01238-205ENST00000567549 ACSM3Q53FZ2 586 aa14.53□□□□□ -0.08
LINC01238-205ENST00000567549 ZNF660Q6AZW8 331 aaPredicted RBP14.53□□□□□ -0.08
LINC01238-205ENST00000567549 SIGIRRQ6IA17 410 aa14.53□□□□□ -0.08
LINC01238-205ENST00000567549 ZNF429Q86V71 674 aa14.53□□□□□ -0.08
LINC01238-205ENST00000567549 LYPD6Q86Y78 171 aa14.53□□□□□ -0.08
LINC01238-205ENST00000567549 NPBQ8NG41 125 aa14.53□□□□□ -0.08
LINC01238-205ENST00000567549 OR1N2Q8NGR9 330 aa14.53□□□□□ -0.08
LINC01238-205ENST00000567549 MYOZ3Q8TDC0 251 aa14.53□□□□□ -0.08
LINC01238-205ENST00000567549 IL1F10Q8WWZ1 152 aa14.53□□□□□ -0.08
LINC01238-205ENST00000567549 RNF5Q99942 180 aa14.53□□□□□ -0.08
LINC01238-205ENST00000567549 MRPL20Q9BYC9 149 aaKnown RBP14.53□□□□□ -0.08
LINC01238-205ENST00000567549 PLEKHJ1Q9NW61 149 aa14.53□□□□□ -0.08
LINC01238-205ENST00000567549 ITGB1BP1O14713 200 aa14.52□□□□□ -0.09
LINC01238-205ENST00000567549 ATP6V0E1O15342 81 aa14.52□□□□□ -0.09
LINC01238-205ENST00000567549 NDUFA3O95167 84 aa14.52□□□□□ -0.09
LINC01238-205ENST00000567549 HTR2CP28335 458 aa14.52□□□□□ -0.09
LINC01238-205ENST00000567549 PPIFP30405 207 aaKnown RBP14.52□□□□□ -0.09
LINC01238-205ENST00000567549 HSD17B12Q53GQ0 312 aa14.52□□□□□ -0.09
LINC01238-205ENST00000567549 FAM53AQ6NSI3 398 aaPredicted RBP14.52□□□□□ -0.09
LINC01238-205ENST00000567549 ZNF491Q8N8L2 437 aa14.52□□□□□ -0.09
LINC01238-205ENST00000567549 NDUFB11Q9NX14 153 aa14.52□□□□□ -0.09
LINC01238-205ENST00000567549 SAA2-SAA4A0A096LPE2 208 aa14.51□□□□□ -0.09
LINC01238-205ENST00000567549 HSPA12AO43301 675 aa14.51□□□□□ -0.09
LINC01238-205ENST00000567549 LY86O95711 162 aa14.51□□□□□ -0.09
LINC01238-205ENST00000567549 IGLV1-40P01703 118 aa14.51□□□□□ -0.09
LINC01238-205ENST00000567549 GSTP1P09211 210 aaKnown RBP14.51□□□□□ -0.09
LINC01238-205ENST00000567549 SAA2P0DJI9 122 aaPredicted RBP14.51□□□□□ -0.09
LINC01238-205ENST00000567549 GADD45AP24522 165 aa14.51□□□□□ -0.09
LINC01238-205ENST00000567549 RAB9AP51151 201 aa14.51□□□□□ -0.09
LINC01238-205ENST00000567549 GNMTQ14749 295 aa14.51□□□□□ -0.09
LINC01238-205ENST00000567549 TRAM1Q15629 374 aa14.51□□□□□ -0.09
LINC01238-205ENST00000567549 SSX1Q16384 188 aa14.51□□□□□ -0.09
LINC01238-205ENST00000567549 C1orf100Q5SVJ3 147 aa14.51□□□□□ -0.09
LINC01238-205ENST00000567549 OR6M1Q8NGM8 313 aa14.51□□□□□ -0.09
LINC01238-205ENST00000567549 TM2D1Q9BX74 207 aa14.51□□□□□ -0.09
LINC01238-205ENST00000567549 SLC23A1Q9UHI7 598 aa14.51□□□□□ -0.09
LINC01238-205ENST00000567549 STUB1Q9UNE7 303 aa14.51□□□□□ -0.09
LINC01238-205ENST00000567549 SSR3Q9UNL2 185 aa14.51□□□□□ -0.09
LINC01238-205ENST00000567549 LSM4Q9Y4Z0 139 aaKnown RBP14.51□□□□□ -0.09
LINC01238-205ENST00000567549 WSB1Q9Y6I7 421 aa14.51□□□□□ -0.09
LINC01238-205ENST00000567549 SMAD5-AS1Q9Y6J3 95 aa14.51□□□□□ -0.09
LINC01238-205ENST00000567549 IGHV7-81A0A0B4J1V7 117 aa14.5□□□□□ -0.09
LINC01238-205ENST00000567549 H7C2Y5 167 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms