RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 KCNIP1Q9NZI2 227 aa11.83□□□□□ -0.52
PALB2-205ENST00000567003 CNOT2Q9NZN8 540 aaKnown RBP11.83□□□□□ -0.52
PALB2-205ENST00000567003 ADAM30Q9UKF2 790 aa11.83□□□□□ -0.52
PALB2-205ENST00000567003 TRBV5-5A0A0J9YX44 114 aa11.82□□□□□ -0.52
PALB2-205ENST00000567003 ANKRD34BA5PLL1 514 aa11.82□□□□□ -0.52
PALB2-205ENST00000567003 YPEL1O60688 119 aa11.82□□□□□ -0.52
PALB2-205ENST00000567003 CRTAPO75718 401 aaPredicted RBP11.82□□□□□ -0.52
PALB2-205ENST00000567003 TRGV3P03979 118 aa11.82□□□□□ -0.52
PALB2-205ENST00000567003 CT45A6P0DMU7 189 aa11.82□□□□□ -0.52
PALB2-205ENST00000567003 CT45A5P0DMU8 189 aa11.82□□□□□ -0.52
PALB2-205ENST00000567003 CT45A7P0DMV0 189 aa11.82□□□□□ -0.52
PALB2-205ENST00000567003 MGMTP16455 207 aa11.82□□□□□ -0.52
PALB2-205ENST00000567003 GPR176Q14439 515 aa11.82□□□□□ -0.52
PALB2-205ENST00000567003 SMN1Q16637 294 aaKnown RBP11.82□□□□□ -0.52
PALB2-205ENST00000567003 CD200R1LQ6Q8B3 271 aa11.82□□□□□ -0.52
PALB2-205ENST00000567003 TCTEX1D1Q8N7M0 179 aa11.82□□□□□ -0.52
PALB2-205ENST00000567003 OR2AK2Q8NG84 335 aa11.82□□□□□ -0.52
PALB2-205ENST00000567003 FAM46BQ96A09 425 aa11.82□□□□□ -0.52
PALB2-205ENST00000567003 Q96M66 194 aa11.82□□□□□ -0.52
PALB2-205ENST00000567003 Q96MT0 163 aa11.82□□□□□ -0.52
PALB2-205ENST00000567003 YPEL2Q96QA6 119 aa11.82□□□□□ -0.52
PALB2-205ENST00000567003 NKX1-2Q9UD57 310 aaPredicted RBP11.82□□□□□ -0.52
PALB2-205ENST00000567003 KMT2AQ03164 3969 aa11.81□□□□□ -0.52
PALB2-205ENST00000567003 CA2P00918 260 aa11.81□□□□□ -0.52
PALB2-205ENST00000567003 IFNA6P05013 189 aa11.81□□□□□ -0.52
PALB2-205ENST00000567003 FUT3P21217 361 aa11.81□□□□□ -0.52
PALB2-205ENST00000567003 HTD2P86397 168 aa11.81□□□□□ -0.52
PALB2-205ENST00000567003 TMEM267Q0VDI3 215 aaPredicted RBP11.81□□□□□ -0.52
PALB2-205ENST00000567003 CCDC58Q4VC31 144 aa11.81□□□□□ -0.52
PALB2-205ENST00000567003 DMKNQ6E0U4 476 aaPredicted RBP11.81□□□□□ -0.52
PALB2-205ENST00000567003 PYHIN1Q6K0P9 492 aa11.81□□□□□ -0.52
PALB2-205ENST00000567003 IL34Q6ZMJ4 242 aa11.81□□□□□ -0.52
PALB2-205ENST00000567003 GHSRQ92847 366 aa11.81□□□□□ -0.52
PALB2-205ENST00000567003 SMIM19Q96E16 107 aa11.81□□□□□ -0.52
PALB2-205ENST00000567003 TUBA4BQ9H853 241 aa11.81□□□□□ -0.52
PALB2-205ENST00000567003 MRPS18AQ9NVS2 196 aaKnown RBP11.81□□□□□ -0.52
PALB2-205ENST00000567003 RPL36Q9Y3U8 105 aaKnown RBP11.81□□□□□ -0.52
PALB2-205ENST00000567003 IZUMO1RA6ND01 250 aa11.8□□□□□ -0.52
PALB2-205ENST00000567003 H0YJW9 148 aa11.8□□□□□ -0.52
PALB2-205ENST00000567003 H3BNX3 289 aa11.8□□□□□ -0.52
PALB2-205ENST00000567003 H7C2Y5 167 aa11.8□□□□□ -0.52
PALB2-205ENST00000567003 OGG1O15527 345 aa11.8□□□□□ -0.52
PALB2-205ENST00000567003 PDCD6O75340 191 aa11.8□□□□□ -0.52
PALB2-205ENST00000567003 CA11O75493 328 aa11.8□□□□□ -0.52
PALB2-205ENST00000567003 RGS11O94810 467 aa11.8□□□□□ -0.52
PALB2-205ENST00000567003 GSTP1P09211 210 aaKnown RBP11.8□□□□□ -0.52
PALB2-205ENST00000567003 RPS11P62280 158 aaKnown RBP eCLIP11.8□□□□□ -0.52
PALB2-205ENST00000567003 HMGN3Q15651 99 aa11.8□□□□□ -0.52
PALB2-205ENST00000567003 C4orf48Q5BLP8 95 aa11.8□□□□□ -0.52
PALB2-205ENST00000567003 C6orf141Q5SZD1 244 aa11.8□□□□□ -0.52
PALB2-205ENST00000567003 GRPEL2Q8TAA5 225 aa11.8□□□□□ -0.52
PALB2-205ENST00000567003 IL1F10Q8WWZ1 152 aa11.8□□□□□ -0.52
PALB2-205ENST00000567003 ABHD14BQ96IU4 210 aa11.8□□□□□ -0.52
PALB2-205ENST00000567003 SULT4A1Q9BR01 284 aa11.8□□□□□ -0.52
PALB2-205ENST00000567003 THAP7Q9BT49 309 aaPredicted RBP11.8□□□□□ -0.52
PALB2-205ENST00000567003 FGF20Q9NP95 211 aaPredicted RBP11.8□□□□□ -0.52
PALB2-205ENST00000567003 ZNF355PQ9NSJ1 428 aa11.8□□□□□ -0.52
PALB2-205ENST00000567003 METTL1Q9UBP6 276 aaKnown RBP11.8□□□□□ -0.52
PALB2-205ENST00000567003 CKLFQ9UBR5 152 aa11.8□□□□□ -0.52
PALB2-205ENST00000567003 CLEC2DQ9UHP7 191 aa11.8□□□□□ -0.52
PALB2-205ENST00000567003 FAM90A7PA6NKC0 464 aa11.79□□□□□ -0.52
PALB2-205ENST00000567003 FAM90A23PA8MXZ1 464 aa11.79□□□□□ -0.52
PALB2-205ENST00000567003 GPX5O75715 221 aa11.79□□□□□ -0.52
PALB2-205ENST00000567003 FSTP19883 344 aa11.79□□□□□ -0.52
PALB2-205ENST00000567003 SYNJ2BPP57105 145 aa11.79□□□□□ -0.52
PALB2-205ENST00000567003 LINC00205P59089 165 aa11.79□□□□□ -0.52
PALB2-205ENST00000567003 PSG5Q15238 335 aa11.79□□□□□ -0.52
PALB2-205ENST00000567003 AKIRIN2Q53H80 203 aa11.79□□□□□ -0.52
PALB2-205ENST00000567003 OR5T1Q8NG75 326 aa11.79□□□□□ -0.52
PALB2-205ENST00000567003 OR9G4Q8NGQ1 327 aa11.79□□□□□ -0.52
PALB2-205ENST00000567003 GALMQ96C23 342 aa11.79□□□□□ -0.52
PALB2-205ENST00000567003 OR14A2Q96R54 314 aa11.79□□□□□ -0.52
PALB2-205ENST00000567003 PLEKHA3Q9HB20 300 aa11.79□□□□□ -0.52
PALB2-205ENST00000567003 RNF150Q9ULK6 438 aa11.79□□□□□ -0.52
PALB2-205ENST00000567003 HERC2O95714 4834 aa11.78□□□□□ -0.52
PALB2-205ENST00000567003 TRBV5-7A0A0A0MS05 114 aa11.78□□□□□ -0.52
PALB2-205ENST00000567003 PNMA8CA0A1B0GUJ8 204 aa11.78□□□□□ -0.52
PALB2-205ENST00000567003 C13orf42A0A1B0GVH6 325 aa11.78□□□□□ -0.52
PALB2-205ENST00000567003 OR5H14A6NHG9 310 aa11.78□□□□□ -0.52
PALB2-205ENST00000567003 ARPC1BO15143 372 aaKnown RBP11.78□□□□□ -0.52
PALB2-205ENST00000567003 WBP4O75554 376 aaKnown RBP11.78□□□□□ -0.52
PALB2-205ENST00000567003 CIB2O75838 187 aa11.78□□□□□ -0.52
PALB2-205ENST00000567003 TRBV12-3P01733 135 aa11.78□□□□□ -0.52
PALB2-205ENST00000567003 KLF5Q13887 457 aaPredicted RBP11.78□□□□□ -0.52
PALB2-205ENST00000567003 Q499Y3 187 aa11.78□□□□□ -0.52
PALB2-205ENST00000567003 LY6G6FQ5SQ64 297 aa11.78□□□□□ -0.52
PALB2-205ENST00000567003 FAM71F2Q6NXP2 309 aa11.78□□□□□ -0.52
PALB2-205ENST00000567003 TMPRSS11AQ6ZMR5 421 aa11.78□□□□□ -0.52
PALB2-205ENST00000567003 ZNF554Q86TJ5 538 aa11.78□□□□□ -0.52
PALB2-205ENST00000567003 POC5Q8NA72 575 aa11.78□□□□□ -0.52
PALB2-205ENST00000567003 DRAXINQ8NBI3 349 aaPredicted RBP11.78□□□□□ -0.52
PALB2-205ENST00000567003 PGLYRP3Q96LB9 341 aa11.78□□□□□ -0.52
PALB2-205ENST00000567003 SLC29A1Q99808 456 aa11.78□□□□□ -0.52
PALB2-205ENST00000567003 SLA2Q9H6Q3 261 aa11.78□□□□□ -0.52
PALB2-205ENST00000567003 RANGRFQ9HD47 186 aaPredicted RBP11.78□□□□□ -0.52
PALB2-205ENST00000567003 BABAM2Q9NXR7 383 aa11.78□□□□□ -0.52
PALB2-205ENST00000567003 SLC23A1Q9UHI7 598 aa11.78□□□□□ -0.52
PALB2-205ENST00000567003 WASHC3Q9Y3C0 194 aa11.78□□□□□ -0.52
PALB2-205ENST00000567003 LOC100130705A0A1B0GUX0 176 aa11.77□□□□□ -0.53
PALB2-205ENST00000567003 RAB29O14966 203 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms