RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 KIF26BQ2KJY2 2108 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 IGHV1OR15-9A0A0B4J2B8 117 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 IGHV5-51A0A0C4DH38 117 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 WI2-2373I1.2A0A1W2PRP0 233 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 TMEM72A0PK05 275 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 B4DEV8 164 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 K7EPK0 472 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 COPEO14579 308 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 MRASO14807 208 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 SLC37A4O43826 429 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 OR2B3O76000 313 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 CXorf1O96002 111 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 HAND1O96004 215 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 IGHV3-11P01762 117 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 FAM228BP0C875 321 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 OR13C7P0DN81 318 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 PSG2P11465 335 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 IMPA1P29218 277 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 GZMMP51124 257 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 CCR6P51684 374 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 CTBP2P56545 445 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 LYZP61626 148 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 BTN3A2P78410 334 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 HLA-DRB3P79483 266 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 DEFA6Q01524 100 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 TMEM267Q0VDI3 215 aaPredicted RBP2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 DAZ2Q13117 558 aaKnown RBP2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 IHHQ14623 411 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 POU6F1Q14863 301 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 MPPED2Q15777 294 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 BATFQ16520 125 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 ACOT6Q3I5F7 207 aaPredicted RBP2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 ZCWPW2Q504Y3 356 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 YIF1BQ5BJH7 314 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 C9orf129Q5T035 196 aaKnown RBP2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 OTPQ5XKR4 325 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 FAM71E1Q6IPT2 247 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 LCN8Q6JVE9 175 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 C3orf33Q6P1S2 294 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 GUSBP11Q6P575 273 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 MARCH3Q86UD3 253 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 ZBTB8OSQ8IWT0 167 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 TMEM256Q8N2U0 113 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 ARIH2OSQ8N7S6 290 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 TMEM75Q8N9X5 138 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 OR2V1Q8NHB1 315 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 MCFD2Q8NI22 146 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 C2orf15Q8WU43 125 aaKnown RBP2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 C15orf40Q8WUR7 153 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 RBMXL1Q96E39 390 aaKnown RBP2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 PDXPQ96GD0 296 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 LINC00477Q96M19 166 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 OLFM3Q96PB7 478 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 DERL3Q96Q80 235 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 MARVELD1Q9BSK0 173 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 FAM96AQ9H5X1 160 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 C12orf10Q9HB07 376 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 HES4Q9HCC6 221 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 DAZ3Q9NR90 486 aaKnown RBP2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 PLSCR3Q9NRY6 295 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 SLC7A10Q9NS82 523 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 ARMC1Q9NVT9 282 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 MDFICQ9P1T7 246 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 HHLA2Q9UM44 414 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 TRANK1O15050 2925 aa2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 RBBP6Q7Z6E9 1792 aaKnown RBP2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 ANKRD11Q6UB99 2663 aaPredicted RBP2.35□□□□□ -2.03
HERPUD1-211ENST00000566550 CTTNBP2Q8WZ74 1663 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 RRBP1Q9P2E9 1410 aaKnown RBP2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 ZFHX4Q86UP3 3567 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 ADGRL2O95490 1459 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 ERVK-7P63135 1459 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 BDP1A6H8Y1 2624 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 IGLV11-55A0A075B6I3 123 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 A0A1W2PP18 115 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 FUOMA2VDF0 154 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 OR4C46A6NHA9 309 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 C2orf74A8MZ97 194 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 C9JQL5 133 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 ISLRO14498 428 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 TCF21O43680 179 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 GCM2O75603 506 aaPredicted RBP2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 OR7C1O76099 320 aaPredicted RBP2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 CRYBA1P05813 215 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 OR56A5P0C7T3 313 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 OR12D1P0DN82 309 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 ELK4P28324 431 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 ALDH3A1P30838 453 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 NUDT1P36639 197 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 OR1E2P47887 323 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 PSMB3P49720 205 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 ZNF83P51522 516 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 CMC4P56277 68 aaPredicted RBP2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 RAB5BP61020 215 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 C15orf32Q32M92 178 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 HES3Q5TGS1 186 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 FAM78BQ5VT40 261 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 GLYATQ6IB77 296 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 LAIR2Q6ISS4 152 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 Q6ZRU5 148 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms