RNA–Protein interactions for RNA: ENST00000565580.3

TCF4-229, Transcript of transcription factor 4, human

TSL 4

Gene TCF4, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-229	ENST00000565580	NABP2	Q9BQ15	211 aa		4.97	□□□□□ -1.61
TCF4-229	ENST00000565580	SULT4A1	Q9BR01	284 aa		4.97	□□□□□ -1.61
TCF4-229	ENST00000565580	UQCC2	Q9BRT2	126 aa		4.97	□□□□□ -1.61
TCF4-229	ENST00000565580	NICN1	Q9BSH3	213 aa		4.97	□□□□□ -1.61
TCF4-229	ENST00000565580	ABHD14A	Q9BUJ0	271 aa		4.97	□□□□□ -1.61
TCF4-229	ENST00000565580	MCRIP2	Q9BUT9	160 aa	Known RBP	4.97	□□□□□ -1.61
TCF4-229	ENST00000565580	MRPL20	Q9BYC9	149 aa	Known RBP	4.97	□□□□□ -1.61
TCF4-229	ENST00000565580	PLCXD1	Q9NUJ7	323 aa		4.97	□□□□□ -1.61
TCF4-229	ENST00000565580	PRR13	Q9NZ81	148 aa		4.97	□□□□□ -1.61
TCF4-229	ENST00000565580	ZNF107	Q9UII5	783 aa	Predicted RBP	4.97	□□□□□ -1.61
TCF4-229	ENST00000565580	WSB1	Q9Y6I7	421 aa		4.97	□□□□□ -1.61
TCF4-229	ENST00000565580	SAA2-SAA4	A0A096LPE2	208 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580		A0A0A6YYD4	124 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	IGHV7-81	A0A0B4J1V7	117 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580		G3V318	75 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	CASQ2	O14958	399 aa	Predicted RBP	4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	ATP6V0E1	O15342	81 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	IGHG4	P01861	327 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	SAA2	P0DJI9	122 aa	Predicted RBP	4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	VDAC1	P21796	283 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	MAPK3	P27361	379 aa	Predicted RBP	4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	PSMB8	P28062	276 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	CHAT	P28329	748 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	HTR2C	P28335	458 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	PPIF	P30405	207 aa	Known RBP	4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	ACTB	P60709	375 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	RPS27A	P62979	156 aa	Known RBP	4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	HTD2	P86397	168 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	DGCR2	P98153	550 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	NDP	Q00604	133 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	CD69	Q07108	199 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	UNC119	Q13432	240 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	KIAA0141	Q14154	515 aa	Predicted RBP	4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	HMGN3	Q15651	99 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	ACSM3	Q53FZ2	586 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	RBM48	Q5RL73	367 aa	Known RBP	4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	C1orf100	Q5SVJ3	147 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	ASPHD1	Q5U4P2	390 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	STEAP3	Q658P3	488 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	ZNF833P	Q6ZTB9	187 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	C6orf201	Q7Z4U5	140 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	OR8U1	Q8NH10	309 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	MYOZ3	Q8TDC0	251 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	C4orf3	Q8WVX3	66 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	PRR25	Q96S07	402 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	FAAP24	Q9BTP7	215 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	TMED9	Q9BVK6	235 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	GON7	Q9BXV9	100 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	ANKRD60	Q9BZ19	345 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	PARP12	Q9H0J9	701 aa	Known RBP	4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	CST11	Q9H112	138 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	KLK15	Q9H2R5	256 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	GNB4	Q9HAV0	340 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	RAB9B	Q9NP90	201 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	C8orf4	Q9NR00	106 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	KCNIP1	Q9NZI2	227 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	GHRL	Q9UBU3	117 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	SCOC	Q9UIL1	159 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	JPT1	Q9UK76	154 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	ERGIC3	Q9Y282	383 aa		4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	LSM2	Q9Y333	95 aa	Known RBP	4.96	□□□□□ -1.62
TCF4-229	ENST00000565580	HUWE1	Q7Z6Z7	4374 aa	Known RBP	4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	TMEM14DP	A8MWL7	114 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	SEC14L6	B5MCN3	397 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	ANKRD65	E5RJM6	399 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	PTGES3L	E9PB15	166 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	YPEL1	O60688	119 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	NAPSA	O96009	420 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	HLA-DRB1	P01911	266 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	CDK1	P06493	297 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	UBB	P0CG47	229 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	BLVRB	P30043	206 aa	Predicted RBP	4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	GNB1	P62873	340 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	QRFP	P83859	136 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	FHL3	Q13643	280 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	C5orf64	Q2M2E5	130 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	RPL39P5	Q59GN2	51 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	LY6G6F	Q5SQ64	297 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	RNLS	Q5VYX0	342 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	ZNF880	Q6PDB4	577 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	FAM131A	Q6UXB0	335 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	CEACAM19	Q7Z692	300 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	ZNF554	Q86TJ5	538 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	OR5M8	Q8NGP6	311 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	IL1F10	Q8WWZ1	152 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	THRSP	Q92748	146 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	NEDD4L	Q96PU5	975 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	YPEL2	Q96QA6	119 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	OR5B12	Q96R08	314 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	GFI1	Q99684	422 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	ZNF251	Q9BRH9	671 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	HDHD3	Q9BSH5	251 aa	Predicted RBP	4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	MND1	Q9BWT6	205 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	TM2D1	Q9BX74	207 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	TMEM59	Q9BXS4	323 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	IFI27L2	Q9H2X8	130 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	OR51J1	Q9H342	316 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	PARP11	Q9NR21	331 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	ZNF580	Q9UK33	172 aa		4.95	□□□□□ -1.62
TCF4-229	ENST00000565580	FBXO7	Q9Y3I1	522 aa		4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms