RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 UBE2WQ96B02 151 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 TMIGD2Q96BF3 282 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 FMC1Q96HJ9 113 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 MBOAT7Q96N66 472 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 RILPQ96NA2 401 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 WDR55Q9H6Y2 383 aaPredicted RBP1.41□□□□□ -2.18
PALB2-203ENST00000565038 PLEKHA1Q9HB21 404 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 RHOFQ9HBH0 211 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 TREM1Q9NP99 234 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 XPNPEP1Q9NQW7 623 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 RMND1Q9NWS8 449 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 MRPL16Q9NX20 251 aaKnown RBP1.41□□□□□ -2.18
PALB2-203ENST00000565038 TFR2Q9UP52 801 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 U3KQK5 164 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 CFAP54Q96N23 3096 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 FRYLO94915 3013 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 MGAMO43451 1857 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 PLXNA1Q9UIW2 1896 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 TECTAO75443 2155 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 VPS13AQ96RL7 3174 aa1.41□□□□□ -2.18
PALB2-203ENST00000565038 SMG1Q96Q15 3661 aaKnown RBP1.41□□□□□ -2.18
PALB2-203ENST00000565038 VWA8A3KMH1 1905 aa1.4□□□□□ -2.18
PALB2-203ENST00000565038 MYH1P12882 1939 aa1.4□□□□□ -2.18
PALB2-203ENST00000565038 SDK1Q7Z5N4 2213 aa1.4□□□□□ -2.18
PALB2-203ENST00000565038 DOCK1Q14185 1865 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 LOC285556D6RIA3 1793 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 GOLGA8QA0A0J9YX86 632 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 GOLGA8IPA6NC78 632 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 G3V3Q6 166 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 H3BP45 60 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 COX7A2P2O60397 106 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 ZMPSTE24O75844 475 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 TNFAIP8O95379 198 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 LDOC1O95751 146 aaPredicted RBP1.4□□□□□ -2.19
PALB2-203ENST00000565038 CGB3P0DN86 165 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 CGB7P0DN87 165 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 M6PRP20645 277 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 CCR2P41597 374 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 MAGEA3P43357 314 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 ARPP19P56211 112 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 TRAM1Q15629 374 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 ATP6AP1LQ52LC2 224 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 HBMQ6B0K9 141 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 FAM173BQ6P4H8 233 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 AHSA2Q719I0 299 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 LRRC6Q86X45 466 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 GAPTQ8N292 157 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 CDRT4Q8N9R6 151 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 OR51Q1Q8NH59 317 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 UBA3Q8TBC4 463 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 TWIST2Q8WVJ9 160 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 ZMYND19Q96E35 227 aaPredicted RBP1.4□□□□□ -2.19
PALB2-203ENST00000565038 TCEAL4Q96EI5 215 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 C19orf60Q96EN9 201 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 LINC01587Q99440 93 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 SHCBP1LQ9BZQ2 653 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 NXF2Q9GZY0 626 aaKnown RBP1.4□□□□□ -2.19
PALB2-203ENST00000565038 SLC25A31Q9H0C2 315 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 PRORYQ9H606 182 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 DIABLOQ9NR28 239 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 MRM2Q9UI43 246 aaKnown RBP1.4□□□□□ -2.19
PALB2-203ENST00000565038 SLC22A14Q9Y267 594 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 POFUT2Q9Y2G5 429 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 ZNF292O60281 2723 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 PTPRFP10586 1907 aa1.4□□□□□ -2.19
PALB2-203ENST00000565038 DYSFO75923 2080 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 MCM3APO60318 1980 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 CDK5RAP2Q96SN8 1893 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 DNHD1Q96M86 4753 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 DCHS1Q96JQ0 3298 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 GVINP1Q7Z2Y8 2422 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 PLXNB3Q9ULL4 1909 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 TPRP12270 2363 aaKnown RBP1.39□□□□□ -2.19
PALB2-203ENST00000565038 IGKV1D-37A0A075B6S9 117 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 LINC00854A0A1B0GVQ3 168 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 A6NED7 52 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 ARL5CA6NH57 179 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 OR2AT4A6NND4 320 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 K7ERQ8 282 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 SULT1C2O00338 296 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 CCL16O15467 120 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 YKT6O15498 198 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 HCRTO43612 131 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 SNAP29O95721 258 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 CD8AP01732 235 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 SCGB1C2P0DMR2 95 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 P0DMU3 169 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 FAM231AP0DMU4 169 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 FAM231CP0DMU5 169 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 ZNF22P17026 224 aaPredicted RBP1.39□□□□□ -2.19
PALB2-203ENST00000565038 CASQ1P31415 396 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 RAB38P57729 211 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 TSPAN5P62079 268 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 TOMM34Q15785 309 aaPredicted RBP1.39□□□□□ -2.19
PALB2-203ENST00000565038 ZNF404Q494X3 552 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 SDHAF4Q5VUM1 108 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 NXNL2Q5VZ03 156 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 ZNF322Q6U7Q0 402 aaPredicted RBP1.39□□□□□ -2.19
PALB2-203ENST00000565038 ALKAL1Q6UXT8 129 aa1.39□□□□□ -2.19
PALB2-203ENST00000565038 FAM19A1Q7Z5A9 133 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms