RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 IGKV1D-8A0A087WSZ0 117 aa13.79□□□□□ -0.2
USB1-209ENST00000564387 SAA2-SAA4A0A096LPE2 208 aa13.79□□□□□ -0.2
USB1-209ENST00000564387 RAB29O14966 203 aa13.79□□□□□ -0.2
USB1-209ENST00000564387 XRCC3O43542 346 aa13.79□□□□□ -0.2
USB1-209ENST00000564387 IGKV1D-33P01593 117 aa13.79□□□□□ -0.2
USB1-209ENST00000564387 IGKV1-33P01594 117 aa13.79□□□□□ -0.2
USB1-209ENST00000564387 SAA2P0DJI9 122 aaPredicted RBP13.79□□□□□ -0.2
USB1-209ENST00000564387 TALDO1P37837 337 aa13.79□□□□□ -0.2
USB1-209ENST00000564387 RPL5P46777 297 aaKnown RBP13.79□□□□□ -0.2
USB1-209ENST00000564387 IGSF11Q5DX21 431 aa13.79□□□□□ -0.2
USB1-209ENST00000564387 UBE2NLQ5JXB2 153 aa13.79□□□□□ -0.2
USB1-209ENST00000564387 MOB3BQ86TA1 216 aa13.79□□□□□ -0.2
USB1-209ENST00000564387 WIPF2Q8TF74 440 aaPredicted RBP13.79□□□□□ -0.2
USB1-209ENST00000564387 ACOT12Q8WYK0 555 aa13.79□□□□□ -0.2
USB1-209ENST00000564387 EAF1Q96JC9 268 aaPredicted RBP13.79□□□□□ -0.2
USB1-209ENST00000564387 WNT10AQ9GZT5 417 aa13.79□□□□□ -0.2
USB1-209ENST00000564387 AUNIPQ9H7T9 357 aa13.79□□□□□ -0.2
USB1-209ENST00000564387 SIGLEC9Q9Y336 463 aa13.79□□□□□ -0.2
USB1-209ENST00000564387 ZNF736B4DX44 427 aaPredicted RBP13.78□□□□□ -0.2
USB1-209ENST00000564387 ST8SIA5O15466 376 aa13.78□□□□□ -0.2
USB1-209ENST00000564387 HSPA12AO43301 675 aa13.78□□□□□ -0.2
USB1-209ENST00000564387 FGF16O43320 207 aa13.78□□□□□ -0.2
USB1-209ENST00000564387 PROP1O75360 226 aa13.78□□□□□ -0.2
USB1-209ENST00000564387 OR3A3P47888 321 aa13.78□□□□□ -0.2
USB1-209ENST00000564387 RORCP51449 518 aa13.78□□□□□ -0.2
USB1-209ENST00000564387 LSAMPQ13449 338 aa13.78□□□□□ -0.2
USB1-209ENST00000564387 OR2T10Q8NGZ9 312 aa13.78□□□□□ -0.2
USB1-209ENST00000564387 NUDCD2Q8WVJ2 157 aa13.78□□□□□ -0.2
USB1-209ENST00000564387 MAFIPQ8WZ33 124 aa13.78□□□□□ -0.2
USB1-209ENST00000564387 PHF21AQ96BD5 680 aa13.78□□□□□ -0.2
USB1-209ENST00000564387 S100A16Q96FQ6 103 aaKnown RBP13.78□□□□□ -0.2
USB1-209ENST00000564387 NABP2Q9BQ15 211 aa13.78□□□□□ -0.2
USB1-209ENST00000564387 BCL7BQ9BQE9 202 aa13.78□□□□□ -0.2
USB1-209ENST00000564387 PLSCR3Q9NRY6 295 aa13.78□□□□□ -0.2
USB1-209ENST00000564387 RDH8Q9NYR8 311 aa13.78□□□□□ -0.2
USB1-209ENST00000564387 GAB2Q9UQC2 676 aa13.78□□□□□ -0.2
USB1-209ENST00000564387 MOB4Q9Y3A3 225 aa13.78□□□□□ -0.2
USB1-209ENST00000564387 IGHV3-72A0A0B4J1Y9 119 aa13.77□□□□□ -0.21
USB1-209ENST00000564387 TMEM11P17152 192 aa13.77□□□□□ -0.21
USB1-209ENST00000564387 TMBIM6P55061 237 aa13.77□□□□□ -0.21
USB1-209ENST00000564387 GNG2P59768 71 aa13.77□□□□□ -0.21
USB1-209ENST00000564387 C5orf56Q8N8D9 126 aa13.77□□□□□ -0.21
USB1-209ENST00000564387 SAMD12Q8N8I0 201 aa13.77□□□□□ -0.21
USB1-209ENST00000564387 OR10J5Q8NHC4 309 aa13.77□□□□□ -0.21
USB1-209ENST00000564387 MOSP00540 346 aa13.76□□□□□ -0.21
USB1-209ENST00000564387 APOA1P02647 267 aa13.76□□□□□ -0.21
USB1-209ENST00000564387 CTXN2P0C2S0 81 aa13.76□□□□□ -0.21
USB1-209ENST00000564387 SRSF4Q08170 494 aaKnown RBP13.76□□□□□ -0.21
USB1-209ENST00000564387 H1FOOQ8IZA3 346 aaPredicted RBP13.76□□□□□ -0.21
USB1-209ENST00000564387 OR8H1Q8NGG4 311 aa13.76□□□□□ -0.21
USB1-209ENST00000564387 RAB2BQ8WUD1 216 aa13.76□□□□□ -0.21
USB1-209ENST00000564387 ABHD14BQ96IU4 210 aa13.76□□□□□ -0.21
USB1-209ENST00000564387 S1PR3Q99500 378 aa13.76□□□□□ -0.21
USB1-209ENST00000564387 ST6GALNAC5Q9BVH7 336 aa13.76□□□□□ -0.21
USB1-209ENST00000564387 MRPL20Q9BYC9 149 aaKnown RBP13.76□□□□□ -0.21
USB1-209ENST00000564387 BET1O15155 118 aa13.75□□□□□ -0.21
USB1-209ENST00000564387 CT45A6P0DMU7 189 aa13.75□□□□□ -0.21
USB1-209ENST00000564387 CT45A5P0DMU8 189 aa13.75□□□□□ -0.21
USB1-209ENST00000564387 CT45A7P0DMV0 189 aa13.75□□□□□ -0.21
USB1-209ENST00000564387 ZNF182P17025 639 aaPredicted RBP13.75□□□□□ -0.21
USB1-209ENST00000564387 HES1Q14469 280 aa13.75□□□□□ -0.21
USB1-209ENST00000564387 HNF4GQ14541 408 aa13.75□□□□□ -0.21
USB1-209ENST00000564387 ABCA11PQ4W5N1 156 aa13.75□□□□□ -0.21
USB1-209ENST00000564387 CNIH2Q6PI25 160 aa13.75□□□□□ -0.21
USB1-209ENST00000564387 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.75□□□□□ -0.21
USB1-209ENST00000564387 SGMS2Q8NHU3 365 aa13.75□□□□□ -0.21
USB1-209ENST00000564387 ANXA10Q9UJ72 324 aa13.75□□□□□ -0.21
USB1-209ENST00000564387 PKD1L1Q8TDX9 2849 aa13.74□□□□□ -0.21
USB1-209ENST00000564387 HAX1O00165 279 aa13.74□□□□□ -0.21
USB1-209ENST00000564387 HLA-DQB1P01920 261 aa13.74□□□□□ -0.21
USB1-209ENST00000564387 EIF4EP06730 217 aaKnown RBP13.74□□□□□ -0.21
USB1-209ENST00000564387 SPCS2Q15005 226 aa13.74□□□□□ -0.21
USB1-209ENST00000564387 RPL39P5Q59GN2 51 aa13.74□□□□□ -0.21
USB1-209ENST00000564387 HOGA1Q86XE5 327 aa13.74□□□□□ -0.21
USB1-209ENST00000564387 CLVS1Q8IUQ0 354 aaPredicted RBP13.74□□□□□ -0.21
USB1-209ENST00000564387 Q8N9W7 124 aa13.74□□□□□ -0.21
USB1-209ENST00000564387 OR5AN1Q8NGI8 311 aa13.74□□□□□ -0.21
USB1-209ENST00000564387 COMMD3Q9UBI1 195 aa13.74□□□□□ -0.21
USB1-209ENST00000564387 ANAPC10Q9UM13 185 aa13.74□□□□□ -0.21
USB1-209ENST00000564387 PTHLHP12272 177 aa13.73□□□□□ -0.21
USB1-209ENST00000564387 CBX5P45973 191 aa13.73□□□□□ -0.21
USB1-209ENST00000564387 TAS2R20P59543 309 aa13.73□□□□□ -0.21
USB1-209ENST00000564387 TMEM69Q5SWH9 247 aa13.73□□□□□ -0.21
USB1-209ENST00000564387 FAM71E2Q8N5Q1 922 aa13.73□□□□□ -0.21
USB1-209ENST00000564387 KLHDC1Q8N7A1 406 aa13.73□□□□□ -0.21
USB1-209ENST00000564387 AP3S1Q92572 193 aa13.73□□□□□ -0.21
USB1-209ENST00000564387 ZNF221Q9UK13 617 aa13.73□□□□□ -0.21
USB1-209ENST00000564387 OR5H14A6NHG9 310 aa13.72□□□□□ -0.21
USB1-209ENST00000564387 H0YJW9 148 aa13.72□□□□□ -0.21
USB1-209ENST00000564387 TUSC2O75896 110 aa13.72□□□□□ -0.21
USB1-209ENST00000564387 IGHG2P01859 326 aa13.72□□□□□ -0.21
USB1-209ENST00000564387 OR8U9P0C7N5 309 aa13.72□□□□□ -0.21
USB1-209ENST00000564387 ELK1P19419 428 aa13.72□□□□□ -0.21
USB1-209ENST00000564387 MC5RP33032 325 aa13.72□□□□□ -0.21
USB1-209ENST00000564387 F2RL1P55085 397 aa13.72□□□□□ -0.21
USB1-209ENST00000564387 PRR31Q5SQ13 230 aa13.72□□□□□ -0.21
USB1-209ENST00000564387 MZT2AQ6P582 158 aa13.72□□□□□ -0.21
USB1-209ENST00000564387 GVQW1Q8N7I0 195 aa13.72□□□□□ -0.21
USB1-209ENST00000564387 BEST4Q8NFU0 473 aa13.72□□□□□ -0.21
USB1-209ENST00000564387 OR8U1Q8NH10 309 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms