RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 TFF3Q07654 80 aa9.77□□□□□ -0.84
PCAT1-202ENST00000561978 HABP2Q14520 560 aaPredicted RBP9.77□□□□□ -0.84
PCAT1-202ENST00000561978 C3orf36Q3SXR2 165 aa9.77□□□□□ -0.84
PCAT1-202ENST00000561978 C4orf48Q5BLP8 95 aa9.77□□□□□ -0.84
PCAT1-202ENST00000561978 HIST2H2BCQ6DN03 193 aa9.77□□□□□ -0.84
PCAT1-202ENST00000561978 TREML4Q6UXN2 200 aa9.77□□□□□ -0.84
PCAT1-202ENST00000561978 IL34Q6ZMJ4 242 aa9.77□□□□□ -0.84
PCAT1-202ENST00000561978 OR10V1Q8NGI7 309 aa9.77□□□□□ -0.84
PCAT1-202ENST00000561978 MRPL37Q9BZE1 423 aaKnown RBP9.77□□□□□ -0.84
PCAT1-202ENST00000561978 TLNRD1Q9H1K6 362 aa9.77□□□□□ -0.84
PCAT1-202ENST00000561978 MMP26Q9NRE1 261 aa9.77□□□□□ -0.84
PCAT1-202ENST00000561978 MBNL3Q9NUK0 354 aaKnown RBP9.77□□□□□ -0.84
PCAT1-202ENST00000561978 COA4Q9NYJ1 87 aa9.77□□□□□ -0.84
PCAT1-202ENST00000561978 KCNIP1Q9NZI2 227 aa9.77□□□□□ -0.84
PCAT1-202ENST00000561978 SPG11Q96JI7 2443 aa9.77□□□□□ -0.85
PCAT1-202ENST00000561978 IGHV2OR16-5A0A0B4J2B6 119 aa9.77□□□□□ -0.85
PCAT1-202ENST00000561978 IGHV1-18A0A0C4DH31 117 aa9.77□□□□□ -0.85
PCAT1-202ENST00000561978 H0YL77 283 aa9.77□□□□□ -0.85
PCAT1-202ENST00000561978 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.77□□□□□ -0.85
PCAT1-202ENST00000561978 HSPA12AO43301 675 aa9.77□□□□□ -0.85
PCAT1-202ENST00000561978 MMP9P14780 707 aa9.77□□□□□ -0.85
PCAT1-202ENST00000561978 SULT1A2P50226 295 aa9.77□□□□□ -0.85
PCAT1-202ENST00000561978 CACNA1DQ01668 2161 aa9.77□□□□□ -0.85
PCAT1-202ENST00000561978 IL1F10Q8WWZ1 152 aa9.77□□□□□ -0.85
PCAT1-202ENST00000561978 SMIM8Q96KF7 97 aa9.77□□□□□ -0.85
PCAT1-202ENST00000561978 SLC25A15Q9Y619 301 aa9.77□□□□□ -0.85
PCAT1-202ENST00000561978 TMEM30CPA0ZSE6 113 aa9.76□□□□□ -0.85
PCAT1-202ENST00000561978 IFNL4K9M1U5 179 aa9.76□□□□□ -0.85
PCAT1-202ENST00000561978 MLNRO43193 412 aa9.76□□□□□ -0.85
PCAT1-202ENST00000561978 SCO1O75880 301 aa9.76□□□□□ -0.85
PCAT1-202ENST00000561978 PTBP3O95758 552 aaKnown RBP9.76□□□□□ -0.85
PCAT1-202ENST00000561978 SERPINE2P07093 398 aa9.76□□□□□ -0.85
PCAT1-202ENST00000561978 SLC25A6P12236 298 aa9.76□□□□□ -0.85
PCAT1-202ENST00000561978 GNG10P50151 68 aa9.76□□□□□ -0.85
PCAT1-202ENST00000561978 FABP6P51161 128 aa9.76□□□□□ -0.85
PCAT1-202ENST00000561978 HTD2P86397 168 aa9.76□□□□□ -0.85
PCAT1-202ENST00000561978 SSX2Q16385 188 aa9.76□□□□□ -0.85
PCAT1-202ENST00000561978 TIMM23BQ5SRD1 257 aa9.76□□□□□ -0.85
PCAT1-202ENST00000561978 SLC35E4Q6ICL7 350 aa9.76□□□□□ -0.85
PCAT1-202ENST00000561978 ZNF474Q6S9Z5 364 aaPredicted RBP9.76□□□□□ -0.85
PCAT1-202ENST00000561978 FAM219AQ8IW50 185 aa9.76□□□□□ -0.85
PCAT1-202ENST00000561978 PLPPR1Q8TBJ4 325 aa9.76□□□□□ -0.85
PCAT1-202ENST00000561978 SLC25A31Q9H0C2 315 aa9.76□□□□□ -0.85
PCAT1-202ENST00000561978 ARV1Q9H2C2 271 aa9.76□□□□□ -0.85
PCAT1-202ENST00000561978 C19orf12Q9NSK7 152 aa9.76□□□□□ -0.85
PCAT1-202ENST00000561978 FAM212BQ9NTI7 297 aaPredicted RBP9.76□□□□□ -0.85
PCAT1-202ENST00000561978 RCL1Q9Y2P8 373 aaKnown RBP9.76□□□□□ -0.85
PCAT1-202ENST00000561978 HRNRQ86YZ3 2850 aaPredicted RBP9.76□□□□□ -0.85
PCAT1-202ENST00000561978 POLQO75417 2590 aa9.76□□□□□ -0.85
PCAT1-202ENST00000561978 HEXAP06865 529 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 SEC11BP0C7V7 166 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 VAMP2P63027 116 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 HMGN3Q15651 99 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 NMSQ5H8A3 153 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 C5orf24Q7Z6I8 188 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 BPIFCQ8NFQ6 507 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 DMBX1Q8NFW5 382 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 NARS2Q96I59 477 aaKnown RBP9.75□□□□□ -0.85
PCAT1-202ENST00000561978 JKAMPQ9P055 326 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 RBM7Q9Y580 266 aaKnown RBP9.75□□□□□ -0.85
PCAT1-202ENST00000561978 FBN2P35556 2912 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 A0A1B0GU03 582 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 A6NLC8 198 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 TSPAN4O14817 238 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 ADAM20O43506 726 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 APOC3P02656 99 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 CD200P41217 278 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 ASCL1P50553 236 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 RAB13P51153 203 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 FAM27E3Q08E93 113 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 PJVKQ0ZLH3 352 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 SWI5Q1ZZU3 235 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 SMIM21Q3B7S5 101 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 LCE2CQ5TA81 110 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 ACP7Q6ZNF0 438 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 C11orf53Q8IXP5 236 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 OR2C3Q8N628 320 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 ZBTB34Q8NCN2 500 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 DTD1Q8TEA8 209 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 MUCL1Q96DR8 90 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 NEU1Q99519 415 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 PLEKHF2Q9H8W4 249 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 PARP11Q9NR21 331 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 OR14J1Q9UGF5 321 aa9.75□□□□□ -0.85
PCAT1-202ENST00000561978 CADP27708 2225 aa9.74□□□□□ -0.85
PCAT1-202ENST00000561978 TMEM218A2RU14 115 aa9.74□□□□□ -0.85
PCAT1-202ENST00000561978 OOEPA6NGQ2 149 aa9.74□□□□□ -0.85
PCAT1-202ENST00000561978 RNF212BA8MTL3 300 aa9.74□□□□□ -0.85
PCAT1-202ENST00000561978 MED6O75586 246 aa9.74□□□□□ -0.85
PCAT1-202ENST00000561978 SCAF4O95104 1147 aaKnown RBP9.74□□□□□ -0.85
PCAT1-202ENST00000561978 RAB5CP51148 216 aa9.74□□□□□ -0.85
PCAT1-202ENST00000561978 ID3Q02535 119 aa9.74□□□□□ -0.85
PCAT1-202ENST00000561978 TESK1Q15569 626 aa9.74□□□□□ -0.85
PCAT1-202ENST00000561978 ERGIC1Q969X5 290 aa9.74□□□□□ -0.85
PCAT1-202ENST00000561978 GALMQ96C23 342 aa9.74□□□□□ -0.85
PCAT1-202ENST00000561978 GINS3Q9BRX5 216 aa9.74□□□□□ -0.85
PCAT1-202ENST00000561978 SMIM3Q9BZL3 60 aa9.74□□□□□ -0.85
PCAT1-202ENST00000561978 TREM1Q9NP99 234 aa9.74□□□□□ -0.85
PCAT1-202ENST00000561978 APCP25054 2843 aa9.74□□□□□ -0.85
PCAT1-202ENST00000561978 TNFSF12O43508 249 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms