RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 ZNF491Q8N8L2 437 aa9.2□□□□□ -0.94
CARMIL3-204ENST00000561354 UBALD1Q8TB05 177 aa9.2□□□□□ -0.94
CARMIL3-204ENST00000561354 CCDC107Q8WV48 283 aa9.2□□□□□ -0.94
CARMIL3-204ENST00000561354 ACOT12Q8WYK0 555 aa9.2□□□□□ -0.94
CARMIL3-204ENST00000561354 RGP1Q92546 391 aaPredicted RBP9.2□□□□□ -0.94
CARMIL3-204ENST00000561354 TMEM203Q969S6 136 aa9.2□□□□□ -0.94
CARMIL3-204ENST00000561354 PPP1R14BQ96C90 147 aa9.2□□□□□ -0.94
CARMIL3-204ENST00000561354 KCTD12Q96CX2 325 aaKnown RBP9.2□□□□□ -0.94
CARMIL3-204ENST00000561354 SMIM19Q96E16 107 aa9.2□□□□□ -0.94
CARMIL3-204ENST00000561354 TMED9Q9BVK6 235 aa9.2□□□□□ -0.94
CARMIL3-204ENST00000561354 KLK15Q9H2R5 256 aa9.2□□□□□ -0.94
CARMIL3-204ENST00000561354 RAB9BQ9NP90 201 aa9.2□□□□□ -0.94
CARMIL3-204ENST00000561354 TMEM138Q9NPI0 162 aa9.2□□□□□ -0.94
CARMIL3-204ENST00000561354 ADAM30Q9UKF2 790 aa9.2□□□□□ -0.94
CARMIL3-204ENST00000561354 ING4Q9UNL4 249 aa9.2□□□□□ -0.94
CARMIL3-204ENST00000561354 VSIG4Q9Y279 399 aa9.2□□□□□ -0.94
CARMIL3-204ENST00000561354 STAB2Q8WWQ8 2551 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 SORL1Q92673 2214 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 FAM90A10PA6NDY2 464 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 C12orf77C9JDV5 145 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 AIPO00170 330 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 SLC31A2O15432 143 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 LANCL1O43813 399 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 UPK1BO75841 260 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 SC5DO75845 299 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 ARL6IP5O75915 188 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 LY86O95711 162 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 IGLV1-40P01703 118 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 PTBP1P26599 531 aaKnown RBP eCLIP9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 SDC2P34741 201 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 DEFA1P59665 94 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 DEFA3P59666 94 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 PPP3R1P63098 170 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 CT45A1Q5HYN5 189 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 ATAD3CQ5T2N8 411 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 CT45A3Q8NHU0 189 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 GPR148Q8TDV2 347 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 NEK7Q8TDX7 302 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 TMEM106AQ96A25 262 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 S100A13Q99584 98 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 GNB4Q9HAV0 340 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 SPACA1Q9HBV2 294 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 GNG12Q9UBI6 72 aa9.19□□□□□ -0.94
CARMIL3-204ENST00000561354 TRAV1-2A0A0B4J238 106 aa9.18□□□□□ -0.94
CARMIL3-204ENST00000561354 RGS5O15539 181 aa9.18□□□□□ -0.94
CARMIL3-204ENST00000561354 SPINT2O43291 252 aa9.18□□□□□ -0.94
CARMIL3-204ENST00000561354 SLC2A2P11168 524 aaPredicted RBP9.18□□□□□ -0.94
CARMIL3-204ENST00000561354 GTF2F2P13984 249 aa9.18□□□□□ -0.94
CARMIL3-204ENST00000561354 SERPINA2P20848 420 aa9.18□□□□□ -0.94
CARMIL3-204ENST00000561354 MMDQ15546 238 aa9.18□□□□□ -0.94
CARMIL3-204ENST00000561354 TRIM16LQ309B1 348 aa9.18□□□□□ -0.94
CARMIL3-204ENST00000561354 YIF1BQ5BJH7 314 aa9.18□□□□□ -0.94
CARMIL3-204ENST00000561354 C6orf183Q5T699 404 aa9.18□□□□□ -0.94
CARMIL3-204ENST00000561354 GAPTQ8N292 157 aa9.18□□□□□ -0.94
CARMIL3-204ENST00000561354 ZFP41Q8N8Y5 198 aa9.18□□□□□ -0.94
CARMIL3-204ENST00000561354 PGLYRP3Q96LB9 341 aa9.18□□□□□ -0.94
CARMIL3-204ENST00000561354 OR51J1Q9H342 316 aa9.18□□□□□ -0.94
CARMIL3-204ENST00000561354 RCC2Q9P258 522 aaKnown RBP9.18□□□□□ -0.94
CARMIL3-204ENST00000561354 TRAPPC2LQ9UL33 140 aa9.18□□□□□ -0.94
CARMIL3-204ENST00000561354 A0A1W2PP11 408 aa9.17□□□□□ -0.94
CARMIL3-204ENST00000561354 MCRIP1C9JLW8 97 aa9.17□□□□□ -0.94
CARMIL3-204ENST00000561354 G3V318 75 aa9.17□□□□□ -0.94
CARMIL3-204ENST00000561354 OVOL1O14753 267 aa9.17□□□□□ -0.94
CARMIL3-204ENST00000561354 ATP6V0E1O15342 81 aa9.17□□□□□ -0.94
CARMIL3-204ENST00000561354 HLA-DRB1P01911 266 aa9.17□□□□□ -0.94
CARMIL3-204ENST00000561354 FRMD6-AS1P0C7T7 363 aa9.17□□□□□ -0.94
CARMIL3-204ENST00000561354 LYL1P12980 280 aa9.17□□□□□ -0.94
CARMIL3-204ENST00000561354 MAPK3P27361 379 aaPredicted RBP9.17□□□□□ -0.94
CARMIL3-204ENST00000561354 BDKRB2P30411 391 aa9.17□□□□□ -0.94
CARMIL3-204ENST00000561354 TNFSF8P32971 234 aa9.17□□□□□ -0.94
CARMIL3-204ENST00000561354 RAB9AP51151 201 aa9.17□□□□□ -0.94
CARMIL3-204ENST00000561354 GNB1P62873 340 aa9.17□□□□□ -0.94
CARMIL3-204ENST00000561354 GPR176Q14439 515 aa9.17□□□□□ -0.94
CARMIL3-204ENST00000561354 SLC22A6Q4U2R8 563 aa9.17□□□□□ -0.94
CARMIL3-204ENST00000561354 TRAT1Q6PIZ9 186 aa9.17□□□□□ -0.94
CARMIL3-204ENST00000561354 TMEM91Q6ZNR0 172 aa9.17□□□□□ -0.94
CARMIL3-204ENST00000561354 SETD6Q8TBK2 473 aa9.17□□□□□ -0.94
CARMIL3-204ENST00000561354 DCUN1D4Q92564 292 aa9.17□□□□□ -0.94
CARMIL3-204ENST00000561354 GHSRQ92847 366 aa9.17□□□□□ -0.94
CARMIL3-204ENST00000561354 RBMXL1Q96E39 390 aaKnown RBP9.17□□□□□ -0.94
CARMIL3-204ENST00000561354 MRPS24Q96EL2 167 aaKnown RBP9.17□□□□□ -0.94
CARMIL3-204ENST00000561354 DAPK2Q9UIK4 370 aa9.17□□□□□ -0.94
CARMIL3-204ENST00000561354 WSB1Q9Y6I7 421 aa9.17□□□□□ -0.94
CARMIL3-204ENST00000561354 IGHV7-81A0A0B4J1V7 117 aa9.16□□□□□ -0.94
CARMIL3-204ENST00000561354 TRAV41A0A0B4J266 112 aa9.16□□□□□ -0.94
CARMIL3-204ENST00000561354 LCE6AA0A183 80 aa9.16□□□□□ -0.94
CARMIL3-204ENST00000561354 CA11O75493 328 aa9.16□□□□□ -0.94
CARMIL3-204ENST00000561354 PTTG1O95997 202 aa9.16□□□□□ -0.94
CARMIL3-204ENST00000561354 HBZP02008 142 aa9.16□□□□□ -0.94
CARMIL3-204ENST00000561354 SPNP16150 400 aa9.16□□□□□ -0.94
CARMIL3-204ENST00000561354 ACTBP60709 375 aa9.16□□□□□ -0.94
CARMIL3-204ENST00000561354 MXD1Q05195 221 aa9.16□□□□□ -0.94
CARMIL3-204ENST00000561354 OXA1LQ15070 435 aa9.16□□□□□ -0.94
CARMIL3-204ENST00000561354 MORN2Q502X0 79 aa9.16□□□□□ -0.94
CARMIL3-204ENST00000561354 OVCH2Q7RTZ1 564 aa9.16□□□□□ -0.94
CARMIL3-204ENST00000561354 CENPSQ8N2Z9 138 aa9.16□□□□□ -0.94
CARMIL3-204ENST00000561354 GDPD1Q8N9F7 314 aa9.16□□□□□ -0.94
CARMIL3-204ENST00000561354 OR10V1Q8NGI7 309 aa9.16□□□□□ -0.94
CARMIL3-204ENST00000561354 OR4K15Q8NH41 348 aa9.16□□□□□ -0.94
CARMIL3-204ENST00000561354 OR1L1Q8NH94 360 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms