RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 PITPNAQ00169 270 aa12.61□□□□□ -0.39
LMX1B-204ENST00000561065 ARFRP1Q13795 201 aa12.61□□□□□ -0.39
LMX1B-204ENST00000561065 GNMTQ14749 295 aa12.61□□□□□ -0.39
LMX1B-204ENST00000561065 KHDC1LQ5JSQ8 128 aa12.61□□□□□ -0.39
LMX1B-204ENST00000561065 FAM71F2Q6NXP2 309 aa12.61□□□□□ -0.39
LMX1B-204ENST00000561065 ETV3LQ6ZN32 361 aa12.61□□□□□ -0.39
LMX1B-204ENST00000561065 C18orf65Q6ZTR6 163 aa12.61□□□□□ -0.39
LMX1B-204ENST00000561065 FOXRED2Q8IWF2 684 aa12.61□□□□□ -0.39
LMX1B-204ENST00000561065 WFDC9Q8NEX5 89 aa12.61□□□□□ -0.39
LMX1B-204ENST00000561065 RASL11BQ9BPW5 248 aa12.61□□□□□ -0.39
LMX1B-204ENST00000561065 CHCHD6Q9BRQ6 235 aa12.61□□□□□ -0.39
LMX1B-204ENST00000561065 Q9N2K0 584 aa12.61□□□□□ -0.39
LMX1B-204ENST00000561065 AURKAIP1Q9NWT8 199 aaPredicted RBP12.61□□□□□ -0.39
LMX1B-204ENST00000561065 A0A0A6YYD4 124 aa12.6□□□□□ -0.39
LMX1B-204ENST00000561065 LINC01548A6NM66 108 aa12.6□□□□□ -0.39
LMX1B-204ENST00000561065 DIRAS3O95661 229 aa12.6□□□□□ -0.39
LMX1B-204ENST00000561065 MC5RP33032 325 aa12.6□□□□□ -0.39
LMX1B-204ENST00000561065 SLC35B1P78383 322 aa12.6□□□□□ -0.39
LMX1B-204ENST00000561065 HLA-DRB3P79483 266 aa12.6□□□□□ -0.39
LMX1B-204ENST00000561065 OR4A4PQ8NGN8 299 aa12.6□□□□□ -0.39
LMX1B-204ENST00000561065 CHPT1Q8WUD6 406 aa12.6□□□□□ -0.39
LMX1B-204ENST00000561065 SLC23A1Q9UHI7 598 aa12.6□□□□□ -0.39
LMX1B-204ENST00000561065 DAPK2Q9UIK4 370 aa12.6□□□□□ -0.39
LMX1B-204ENST00000561065 ZNF221Q9UK13 617 aa12.6□□□□□ -0.39
LMX1B-204ENST00000561065 FOXI3A8MTJ6 420 aaPredicted RBP12.59□□□□□ -0.39
LMX1B-204ENST00000561065 IGHG2P01859 326 aa12.59□□□□□ -0.39
LMX1B-204ENST00000561065 CD33P20138 364 aa12.59□□□□□ -0.39
LMX1B-204ENST00000561065 SRSF7Q16629 238 aaKnown RBP eCLIP12.59□□□□□ -0.39
LMX1B-204ENST00000561065 FOXB2Q5VYV0 432 aa12.59□□□□□ -0.39
LMX1B-204ENST00000561065 Q8N9W7 124 aa12.59□□□□□ -0.39
LMX1B-204ENST00000561065 OR51E2Q9H255 320 aa12.59□□□□□ -0.39
LMX1B-204ENST00000561065 PLSCR3Q9NRY6 295 aa12.59□□□□□ -0.39
LMX1B-204ENST00000561065 LIN7CQ9NUP9 197 aaKnown RBP12.59□□□□□ -0.39
LMX1B-204ENST00000561065 ETV7Q9Y603 341 aa12.59□□□□□ -0.39
LMX1B-204ENST00000561065 RRP9O43818 475 aaKnown RBP12.58□□□□□ -0.4
LMX1B-204ENST00000561065 PF4P02776 101 aa12.58□□□□□ -0.4
LMX1B-204ENST00000561065 CTXN2P0C2S0 81 aa12.58□□□□□ -0.4
LMX1B-204ENST00000561065 HIST1H1DP16402 221 aaKnown RBP12.58□□□□□ -0.4
LMX1B-204ENST00000561065 SDC2P34741 201 aa12.58□□□□□ -0.4
LMX1B-204ENST00000561065 PLAC9Q5JTB6 97 aa12.58□□□□□ -0.4
LMX1B-204ENST00000561065 SFXN4Q6P4A7 337 aa12.58□□□□□ -0.4
LMX1B-204ENST00000561065 SLC35E3Q7Z769 313 aa12.58□□□□□ -0.4
LMX1B-204ENST00000561065 COMMD1Q8N668 190 aa12.58□□□□□ -0.4
LMX1B-204ENST00000561065 LINC00482Q8N8I6 264 aa12.58□□□□□ -0.4
LMX1B-204ENST00000561065 OR10J5Q8NHC4 309 aa12.58□□□□□ -0.4
LMX1B-204ENST00000561065 NECAP2Q9NVZ3 263 aa12.58□□□□□ -0.4
LMX1B-204ENST00000561065 A0A075B6Q4 140 aa12.57□□□□□ -0.4
LMX1B-204ENST00000561065 SHISA3A0PJX4 238 aa12.57□□□□□ -0.4
LMX1B-204ENST00000561065 RAB27BO00194 218 aa12.57□□□□□ -0.4
LMX1B-204ENST00000561065 AIREO43918 545 aa12.57□□□□□ -0.4
LMX1B-204ENST00000561065 GSTP1P09211 210 aaKnown RBP12.57□□□□□ -0.4
LMX1B-204ENST00000561065 GNB3P16520 340 aa12.57□□□□□ -0.4
LMX1B-204ENST00000561065 GPR12P47775 334 aa12.57□□□□□ -0.4
LMX1B-204ENST00000561065 RPL23AP62750 156 aaKnown RBP12.57□□□□□ -0.4
LMX1B-204ENST00000561065 MXD1Q05195 221 aa12.57□□□□□ -0.4
LMX1B-204ENST00000561065 CDNFQ49AH0 187 aa12.57□□□□□ -0.4
LMX1B-204ENST00000561065 ZNF833PQ6ZTB9 187 aa12.57□□□□□ -0.4
LMX1B-204ENST00000561065 ODF3L1Q8IXM7 274 aa12.57□□□□□ -0.4
LMX1B-204ENST00000561065 STPG2Q8N412 459 aa12.57□□□□□ -0.4
LMX1B-204ENST00000561065 HSPB9Q9BQS6 159 aa12.57□□□□□ -0.4
LMX1B-204ENST00000561065 ZNF251Q9BRH9 671 aa12.57□□□□□ -0.4
LMX1B-204ENST00000561065 ABCG5Q9H222 651 aa12.57□□□□□ -0.4
LMX1B-204ENST00000561065 DCSTAMPQ9H295 470 aa12.57□□□□□ -0.4
LMX1B-204ENST00000561065 DIABLOQ9NR28 239 aa12.57□□□□□ -0.4
LMX1B-204ENST00000561065 KIAA1456Q9P272 454 aa12.57□□□□□ -0.4
LMX1B-204ENST00000561065 A0A0A6YYH2 397 aa12.56□□□□□ -0.4
LMX1B-204ENST00000561065 A6NJ64 397 aa12.56□□□□□ -0.4
LMX1B-204ENST00000561065 AP4M1O00189 453 aa12.56□□□□□ -0.4
LMX1B-204ENST00000561065 FABP7O15540 132 aa12.56□□□□□ -0.4
LMX1B-204ENST00000561065 LSAMPQ13449 338 aa12.56□□□□□ -0.4
LMX1B-204ENST00000561065 IDNKQ5T6J7 187 aa12.56□□□□□ -0.4
LMX1B-204ENST00000561065 REC114Q7Z4M0 266 aa12.56□□□□□ -0.4
LMX1B-204ENST00000561065 FAM71E2Q8N5Q1 922 aa12.56□□□□□ -0.4
LMX1B-204ENST00000561065 MRAPQ8TCY5 172 aa12.56□□□□□ -0.4
LMX1B-204ENST00000561065 RNF5Q99942 180 aa12.56□□□□□ -0.4
LMX1B-204ENST00000561065 GINS4Q9BRT9 223 aa12.56□□□□□ -0.4
LMX1B-204ENST00000561065 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.56□□□□□ -0.4
LMX1B-204ENST00000561065 RBM7Q9Y580 266 aaKnown RBP12.56□□□□□ -0.4
LMX1B-204ENST00000561065 OR5H14A6NHG9 310 aa12.55□□□□□ -0.4
LMX1B-204ENST00000561065 RBBP9O75884 186 aa12.55□□□□□ -0.4
LMX1B-204ENST00000561065 FCGR3AP08637 254 aa12.55□□□□□ -0.4
LMX1B-204ENST00000561065 SCTP09683 121 aa12.55□□□□□ -0.4
LMX1B-204ENST00000561065 OR5H8P0DN80 308 aa12.55□□□□□ -0.4
LMX1B-204ENST00000561065 SLC2A2P11168 524 aaPredicted RBP12.55□□□□□ -0.4
LMX1B-204ENST00000561065 DTYMKP23919 212 aa12.55□□□□□ -0.4
LMX1B-204ENST00000561065 SOX6P35712 828 aa12.55□□□□□ -0.4
LMX1B-204ENST00000561065 F2RL1P55085 397 aa12.55□□□□□ -0.4
LMX1B-204ENST00000561065 TAGLNQ01995 201 aaKnown RBP12.55□□□□□ -0.4
LMX1B-204ENST00000561065 PNLIPRP3Q17RR3 467 aa12.55□□□□□ -0.4
LMX1B-204ENST00000561065 HACD4Q5VWC8 232 aa12.55□□□□□ -0.4
LMX1B-204ENST00000561065 LCNL1Q6ZST4 164 aa12.55□□□□□ -0.4
LMX1B-204ENST00000561065 C8orf86Q6ZUL3 223 aa12.55□□□□□ -0.4
LMX1B-204ENST00000561065 MRPL41Q8IXM3 137 aaKnown RBP12.55□□□□□ -0.4
LMX1B-204ENST00000561065 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.55□□□□□ -0.4
LMX1B-204ENST00000561065 HDHD3Q9BSH5 251 aaPredicted RBP12.55□□□□□ -0.4
LMX1B-204ENST00000561065 MRPL20Q9BYC9 149 aaKnown RBP12.55□□□□□ -0.4
LMX1B-204ENST00000561065 SAA2-SAA4A0A096LPE2 208 aa12.54□□□□□ -0.4
LMX1B-204ENST00000561065 H7C2Y5 167 aa12.54□□□□□ -0.4
LMX1B-204ENST00000561065 MFNGO00587 321 aa12.54□□□□□ -0.4
LMX1B-204ENST00000561065 SAA2P0DJI9 122 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms