RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 SUMF2Q8NBJ7 301 aa9.73□□□□□ -0.85
RABGGTA-213ENST00000560127 CCDC107Q8WV48 283 aa9.73□□□□□ -0.85
RABGGTA-213ENST00000560127 PLEKHA3Q9HB20 300 aa9.73□□□□□ -0.85
RABGGTA-213ENST00000560127 SHISA3A0PJX4 238 aa9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 TMEM30CPA0ZSE6 113 aa9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 IZUMO1RA6ND01 250 aa9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 DENRO43583 198 aaKnown RBP9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 RGS10O43665 173 aa9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 LANCL1O43813 399 aa9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 ORC5O43913 435 aa9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 RPSAP08865 295 aaKnown RBP9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 EGR2P11161 476 aaPredicted RBP9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 TAS2R43P59537 309 aa9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 MED21Q13503 144 aa9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 SPHARQ15513 63 aa9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 ASCL4Q6XD76 172 aa9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 PRSS48Q7RTY5 328 aa9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 TCTEX1D1Q8N7M0 179 aa9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 PXT1Q8NFP0 134 aa9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 NPBQ8NG41 125 aa9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 OR5D14Q8NGL3 314 aa9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 OR10K1Q8NGX5 313 aa9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 MS4A10Q96PG2 267 aa9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 ZNF251Q9BRH9 671 aa9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 MND1Q9BWT6 205 aa9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 CST11Q9H112 138 aa9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 SCN3BQ9NY72 215 aa9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 ERGIC3Q9Y282 383 aa9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 NUBP2Q9Y5Y2 271 aa9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 A3GALT2U3KPV4 340 aa9.72□□□□□ -0.85
RABGGTA-213ENST00000560127 NDUFA3O95167 84 aa9.71□□□□□ -0.86
RABGGTA-213ENST00000560127 RAB3AP20336 220 aa9.71□□□□□ -0.86
RABGGTA-213ENST00000560127 TPPP2P59282 170 aa9.71□□□□□ -0.86
RABGGTA-213ENST00000560127 RPS25P62851 125 aaKnown RBP9.71□□□□□ -0.86
RABGGTA-213ENST00000560127 KLF5Q13887 457 aaPredicted RBP9.71□□□□□ -0.86
RABGGTA-213ENST00000560127 RBM48Q5RL73 367 aaKnown RBP9.71□□□□□ -0.86
RABGGTA-213ENST00000560127 ZNF660Q6AZW8 331 aaPredicted RBP9.71□□□□□ -0.86
RABGGTA-213ENST00000560127 PYHIN1Q6K0P9 492 aa9.71□□□□□ -0.86
RABGGTA-213ENST00000560127 OR10V1Q8NGI7 309 aa9.71□□□□□ -0.86
RABGGTA-213ENST00000560127 OR9G4Q8NGQ1 327 aa9.71□□□□□ -0.86
RABGGTA-213ENST00000560127 MRPL20Q9BYC9 149 aaKnown RBP9.71□□□□□ -0.86
RABGGTA-213ENST00000560127 IFT22Q9H7X7 185 aa9.71□□□□□ -0.86
RABGGTA-213ENST00000560127 TPRKBQ9Y3C4 175 aa9.71□□□□□ -0.86
RABGGTA-213ENST00000560127 DNAH11Q96DT5 4516 aa9.7□□□□□ -0.86
RABGGTA-213ENST00000560127 A0A1W2PP11 408 aa9.7□□□□□ -0.86
RABGGTA-213ENST00000560127 DEDDO75618 318 aa9.7□□□□□ -0.86
RABGGTA-213ENST00000560127 ZP3P21754 424 aa9.7□□□□□ -0.86
RABGGTA-213ENST00000560127 CX3CL1P78423 397 aa9.7□□□□□ -0.86
RABGGTA-213ENST00000560127 TPBGQ13641 420 aa9.7□□□□□ -0.86
RABGGTA-213ENST00000560127 PMS2P11Q13670 270 aa9.7□□□□□ -0.86
RABGGTA-213ENST00000560127 MED22Q15528 200 aa9.7□□□□□ -0.86
RABGGTA-213ENST00000560127 TBCEQ15813 527 aaPredicted RBP9.7□□□□□ -0.86
RABGGTA-213ENST00000560127 SSX1Q16384 188 aa9.7□□□□□ -0.86
RABGGTA-213ENST00000560127 ACTBL2Q562R1 376 aa9.7□□□□□ -0.86
RABGGTA-213ENST00000560127 DDI2Q5TDH0 399 aa9.7□□□□□ -0.86
RABGGTA-213ENST00000560127 LIPKQ5VXJ0 399 aa9.7□□□□□ -0.86
RABGGTA-213ENST00000560127 LCN12Q6JVE5 192 aa9.7□□□□□ -0.86
RABGGTA-213ENST00000560127 CD200R1LQ6Q8B3 271 aa9.7□□□□□ -0.86
RABGGTA-213ENST00000560127 TMEM91Q6ZNR0 172 aa9.7□□□□□ -0.86
RABGGTA-213ENST00000560127 LRRTM1Q86UE6 522 aa9.7□□□□□ -0.86
RABGGTA-213ENST00000560127 Q8N402 240 aa9.7□□□□□ -0.86
RABGGTA-213ENST00000560127 GFI1Q99684 422 aa9.7□□□□□ -0.86
RABGGTA-213ENST00000560127 RANGRFQ9HD47 186 aaPredicted RBP9.7□□□□□ -0.86
RABGGTA-213ENST00000560127 GNG12Q9UBI6 72 aa9.7□□□□□ -0.86
RABGGTA-213ENST00000560127 CXorf65A6NEN9 183 aa9.69□□□□□ -0.86
RABGGTA-213ENST00000560127 FCN1O00602 326 aa9.69□□□□□ -0.86
RABGGTA-213ENST00000560127 OR7C1O76099 320 aaPredicted RBP9.69□□□□□ -0.86
RABGGTA-213ENST00000560127 CDRT1O95170 752 aa9.69□□□□□ -0.86
RABGGTA-213ENST00000560127 MT-ND4P03905 459 aa9.69□□□□□ -0.86
RABGGTA-213ENST00000560127 CSTBP04080 98 aaKnown RBP9.69□□□□□ -0.86
RABGGTA-213ENST00000560127 CD2P06729 351 aa9.69□□□□□ -0.86
RABGGTA-213ENST00000560127 CSN3P07498 182 aa9.69□□□□□ -0.86
RABGGTA-213ENST00000560127 BDKRB2P30411 391 aa9.69□□□□□ -0.86
RABGGTA-213ENST00000560127 SYNJ2BPP57105 145 aa9.69□□□□□ -0.86
RABGGTA-213ENST00000560127 CD81P60033 236 aa9.69□□□□□ -0.86
RABGGTA-213ENST00000560127 GABARAPL2P60520 117 aa9.69□□□□□ -0.86
RABGGTA-213ENST00000560127 STEAP3Q658P3 488 aa9.69□□□□□ -0.86
RABGGTA-213ENST00000560127 ODF3L1Q8IXM7 274 aa9.69□□□□□ -0.86
RABGGTA-213ENST00000560127 DEFB125Q8N687 156 aa9.69□□□□□ -0.86
RABGGTA-213ENST00000560127 TNFAIP8L1Q8WVP5 186 aa9.69□□□□□ -0.86
RABGGTA-213ENST00000560127 FAM103A1Q9BTL3 118 aaKnown RBP9.69□□□□□ -0.86
RABGGTA-213ENST00000560127 TMEM138Q9NPI0 162 aa9.69□□□□□ -0.86
RABGGTA-213ENST00000560127 ACOT13Q9NPJ3 140 aa9.69□□□□□ -0.86
RABGGTA-213ENST00000560127 ADAM30Q9UKF2 790 aa9.69□□□□□ -0.86
RABGGTA-213ENST00000560127 GAB2Q9UQC2 676 aa9.69□□□□□ -0.86
RABGGTA-213ENST00000560127 NUPR2A6NF83 97 aa9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 HTR3BO95264 441 aa9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 CNIH1O95406 144 aa9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 TRGV3P03979 118 aa9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 UCHL1P09936 223 aa9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 CPEP16870 476 aa9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 MECP2P51608 486 aaKnown RBP9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 TMEM267Q0VDI3 215 aaPredicted RBP9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 MLLT11Q13015 90 aaPredicted RBP9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 RSU1Q15404 277 aa9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 ACSM3Q53FZ2 586 aa9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 AKIRIN2Q53H80 203 aa9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 UNQ5815/PRO19632Q6UWF5 114 aa9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 ZNF497Q6ZNH5 498 aa9.68□□□□□ -0.86
RABGGTA-213ENST00000560127 PPP1R27Q86WC6 154 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms