RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 PLECQ15149 4684 aaKnown RBP10.09□□□□□ -0.79
TPM1-220ENST00000559556 HYDINQ4G0P3 5121 aa10.09□□□□□ -0.79
TPM1-220ENST00000559556 OR5H14A6NHG9 310 aa10.09□□□□□ -0.79
TPM1-220ENST00000559556 TRIM64CA6NLI5 447 aa10.09□□□□□ -0.79
TPM1-220ENST00000559556 RRHO14718 337 aa10.09□□□□□ -0.79
TPM1-220ENST00000559556 ATP6V1G2O95670 118 aa10.09□□□□□ -0.79
TPM1-220ENST00000559556 LYL1P12980 280 aa10.09□□□□□ -0.79
TPM1-220ENST00000559556 CX3CL1P78423 397 aa10.09□□□□□ -0.79
TPM1-220ENST00000559556 LRRC36Q1X8D7 754 aa10.09□□□□□ -0.79
TPM1-220ENST00000559556 PYHIN1Q6K0P9 492 aa10.09□□□□□ -0.79
TPM1-220ENST00000559556 ARPC1AQ92747 370 aa10.09□□□□□ -0.79
TPM1-220ENST00000559556 THRSPQ92748 146 aa10.09□□□□□ -0.79
TPM1-220ENST00000559556 FAM46BQ96A09 425 aa10.09□□□□□ -0.79
TPM1-220ENST00000559556 CITED4Q96RK1 184 aa10.09□□□□□ -0.79
TPM1-220ENST00000559556 SULT4A1Q9BR01 284 aa10.09□□□□□ -0.79
TPM1-220ENST00000559556 GHITMQ9H3K2 345 aa10.09□□□□□ -0.79
TPM1-220ENST00000559556 FBXL15Q9H469 300 aa10.09□□□□□ -0.79
TPM1-220ENST00000559556 ZMAT4Q9H898 229 aa10.09□□□□□ -0.79
TPM1-220ENST00000559556 C8orf4Q9NR00 106 aa10.09□□□□□ -0.79
TPM1-220ENST00000559556 PIPOXQ9P0Z9 390 aa10.09□□□□□ -0.79
TPM1-220ENST00000559556 GHRLQ9UBU3 117 aa10.09□□□□□ -0.79
TPM1-220ENST00000559556 NUBP2Q9Y5Y2 271 aa10.09□□□□□ -0.79
TPM1-220ENST00000559556 PNMA8CA0A1B0GUJ8 204 aa10.08□□□□□ -0.8
TPM1-220ENST00000559556 RAB29O14966 203 aa10.08□□□□□ -0.8
TPM1-220ENST00000559556 RBBP9O75884 186 aa10.08□□□□□ -0.8
TPM1-220ENST00000559556 NAPSAO96009 420 aa10.08□□□□□ -0.8
TPM1-220ENST00000559556 CD1AP06126 327 aa10.08□□□□□ -0.8
TPM1-220ENST00000559556 UBBP0CG47 229 aa10.08□□□□□ -0.8
TPM1-220ENST00000559556 EGR2P11161 476 aaPredicted RBP10.08□□□□□ -0.8
TPM1-220ENST00000559556 PITPNAQ00169 270 aa10.08□□□□□ -0.8
TPM1-220ENST00000559556 ST3GAL4Q11206 333 aa10.08□□□□□ -0.8
TPM1-220ENST00000559556 ZNF880Q6PDB4 577 aa10.08□□□□□ -0.8
TPM1-220ENST00000559556 SVOPQ8N4V2 548 aa10.08□□□□□ -0.8
TPM1-220ENST00000559556 CASTOR1Q8WTX7 329 aa10.08□□□□□ -0.8
TPM1-220ENST00000559556 TM2D3Q9BRN9 247 aa10.08□□□□□ -0.8
TPM1-220ENST00000559556 VCX3BQ9H321 246 aa10.08□□□□□ -0.8
TPM1-220ENST00000559556 ABRACLQ9P1F3 81 aa10.08□□□□□ -0.8
TPM1-220ENST00000559556 STEAP1Q9UHE8 339 aa10.08□□□□□ -0.8
TPM1-220ENST00000559556 LCE6AA0A183 80 aa10.07□□□□□ -0.8
TPM1-220ENST00000559556 H0YJW9 148 aa10.07□□□□□ -0.8
TPM1-220ENST00000559556 ARPC1BO15143 372 aaKnown RBP10.07□□□□□ -0.8
TPM1-220ENST00000559556 ST8SIA5O15466 376 aa10.07□□□□□ -0.8
TPM1-220ENST00000559556 HSPB1P04792 205 aaKnown RBP10.07□□□□□ -0.8
TPM1-220ENST00000559556 CT45A6P0DMU7 189 aa10.07□□□□□ -0.8
TPM1-220ENST00000559556 CT45A5P0DMU8 189 aa10.07□□□□□ -0.8
TPM1-220ENST00000559556 CT45A7P0DMV0 189 aa10.07□□□□□ -0.8
TPM1-220ENST00000559556 CELP19835 753 aa10.07□□□□□ -0.8
TPM1-220ENST00000559556 MAPK3P27361 379 aaPredicted RBP10.07□□□□□ -0.8
TPM1-220ENST00000559556 TMEM267Q0VDI3 215 aaPredicted RBP10.07□□□□□ -0.8
TPM1-220ENST00000559556 PLGLAQ15195 96 aa10.07□□□□□ -0.8
TPM1-220ENST00000559556 AKIRIN2Q53H80 203 aa10.07□□□□□ -0.8
TPM1-220ENST00000559556 ACTBL2Q562R1 376 aa10.07□□□□□ -0.8
TPM1-220ENST00000559556 RPL39P5Q59GN2 51 aa10.07□□□□□ -0.8
TPM1-220ENST00000559556 MOB1BQ7L9L4 216 aa10.07□□□□□ -0.8
TPM1-220ENST00000559556 SETD9Q8NE22 299 aa10.07□□□□□ -0.8
TPM1-220ENST00000559556 IL1F10Q8WWZ1 152 aa10.07□□□□□ -0.8
TPM1-220ENST00000559556 FLYWCH2Q96CP2 140 aaKnown RBP10.07□□□□□ -0.8
TPM1-220ENST00000559556 NEDD4LQ96PU5 975 aa10.07□□□□□ -0.8
TPM1-220ENST00000559556 SLC23A1Q9UHI7 598 aa10.07□□□□□ -0.8
TPM1-220ENST00000559556 RNF150Q9ULK6 438 aa10.07□□□□□ -0.8
TPM1-220ENST00000559556 GAB2Q9UQC2 676 aa10.07□□□□□ -0.8
TPM1-220ENST00000559556 WASHC3Q9Y3C0 194 aa10.07□□□□□ -0.8
TPM1-220ENST00000559556 A3GALT2U3KPV4 340 aa10.07□□□□□ -0.8
TPM1-220ENST00000559556 FRAS1Q86XX4 4008 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 EFCAB10A6NFE3 127 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 FCN1O00602 326 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 ITGB1BP1O14713 200 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 HSPA12AO43301 675 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 MC5RP33032 325 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 WNT4P56705 351 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 RPS27AP62979 156 aaKnown RBP10.06□□□□□ -0.8
TPM1-220ENST00000559556 SRSF7Q16629 238 aaKnown RBP eCLIP10.06□□□□□ -0.8
TPM1-220ENST00000559556 TTC23Q5W5X9 447 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 GLDNQ6ZMI3 551 aaPredicted RBP10.06□□□□□ -0.8
TPM1-220ENST00000559556 C6orf201Q7Z4U5 140 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 PPP1R27Q86WC6 154 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 Q8N1Y9 231 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 OR5AN1Q8NGI8 311 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 ABHD5Q8WTS1 349 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 CYGBQ8WWM9 190 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 GGHQ92820 318 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 OR4C12Q96R67 309 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 RNF5Q99942 180 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 AGMATQ9BSE5 352 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 FAAP24Q9BTP7 215 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 TMEM59Q9BXS4 323 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 PARP12Q9H0J9 701 aaKnown RBP10.06□□□□□ -0.8
TPM1-220ENST00000559556 VCXQ9H320 206 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 SLA2Q9H6Q3 261 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 PALMDQ9NP74 551 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 CNOT2Q9NZN8 540 aaKnown RBP10.06□□□□□ -0.8
TPM1-220ENST00000559556 STUB1Q9UNE7 303 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 BIRC6Q9NR09 4857 aa10.06□□□□□ -0.8
TPM1-220ENST00000559556 A8MZ25 164 aa10.05□□□□□ -0.8
TPM1-220ENST00000559556 CASQ2O14958 399 aaPredicted RBP10.05□□□□□ -0.8
TPM1-220ENST00000559556 LDLRAD4O15165 306 aa10.05□□□□□ -0.8
TPM1-220ENST00000559556 SPDEFO95238 335 aa10.05□□□□□ -0.8
TPM1-220ENST00000559556 IGLV1-51P01701 117 aa10.05□□□□□ -0.8
TPM1-220ENST00000559556 IGHV3-11P01762 117 aa10.05□□□□□ -0.8
TPM1-220ENST00000559556 TFAP2AP05549 437 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms