RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 DNAJC12Q9UKB3 198 aa0.69□□□□□ -2.3
CASC4-210ENST00000559550 RTTNQ86VV8 2226 aa0.69□□□□□ -2.3
CASC4-210ENST00000559550 KDM5BQ9UGL1 1544 aa0.69□□□□□ -2.3
CASC4-210ENST00000559550 SLX4Q8IY92 1834 aa0.68□□□□□ -2.3
CASC4-210ENST00000559550 NOTCH1P46531 2555 aa0.68□□□□□ -2.3
CASC4-210ENST00000559550 TMSB15BA0A087X1C1 80 aa0.68□□□□□ -2.3
CASC4-210ENST00000559550 OR5K4A6NMS3 321 aa0.68□□□□□ -2.3
CASC4-210ENST00000559550 M0QYV0 167 aa0.68□□□□□ -2.3
CASC4-210ENST00000559550 OPRM1P35372 400 aa0.68□□□□□ -2.3
CASC4-210ENST00000559550 DAPP51397 102 aa0.68□□□□□ -2.3
CASC4-210ENST00000559550 FAM3AP98173 230 aa0.68□□□□□ -2.3
CASC4-210ENST00000559550 GTF2BQ00403 316 aa0.68□□□□□ -2.3
CASC4-210ENST00000559550 PSG3Q16557 428 aa0.68□□□□□ -2.3
CASC4-210ENST00000559550 ZNF791Q3KP31 576 aaPredicted RBP0.68□□□□□ -2.3
CASC4-210ENST00000559550 LRRC28Q86X40 367 aaPredicted RBP0.68□□□□□ -2.3
CASC4-210ENST00000559550 PLCZ1Q86YW0 608 aa0.68□□□□□ -2.3
CASC4-210ENST00000559550 C10orf126Q8N4M7 172 aa0.68□□□□□ -2.3
CASC4-210ENST00000559550 CCDC127Q96BQ5 260 aa0.68□□□□□ -2.3
CASC4-210ENST00000559550 TAMM41Q96BW9 452 aa0.68□□□□□ -2.3
CASC4-210ENST00000559550 ABHD14BQ96IU4 210 aa0.68□□□□□ -2.3
CASC4-210ENST00000559550 FAM210AQ96ND0 272 aa0.68□□□□□ -2.3
CASC4-210ENST00000559550 MED28Q9H204 178 aa0.68□□□□□ -2.3
CASC4-210ENST00000559550 PUS1Q9Y606 427 aaKnown RBP eCLIP0.68□□□□□ -2.3
CASC4-210ENST00000559550 CCDC88CQ9P219 2028 aa0.67□□□□□ -2.3
CASC4-210ENST00000559550 ZNF532Q9HCE3 1301 aa0.67□□□□□ -2.3
CASC4-210ENST00000559550 KIAA2026Q5HYC2 2103 aa0.67□□□□□ -2.3
CASC4-210ENST00000559550 GRIFINA4D1Z8 144 aa0.67□□□□□ -2.3
CASC4-210ENST00000559550 RFPL4AA6NLU0 287 aa0.67□□□□□ -2.3
CASC4-210ENST00000559550 C2orf74A8MZ97 194 aa0.67□□□□□ -2.3
CASC4-210ENST00000559550 RFPL4AL1F8VTS6 287 aa0.67□□□□□ -2.3
CASC4-210ENST00000559550 CYTH3O43739 400 aa0.67□□□□□ -2.3
CASC4-210ENST00000559550 LIMS3P0CW19 117 aa0.67□□□□□ -2.3
CASC4-210ENST00000559550 LIMS4P0CW20 117 aa0.67□□□□□ -2.3
CASC4-210ENST00000559550 OR13C7P0DN81 318 aa0.67□□□□□ -2.3
CASC4-210ENST00000559550 PSMD7P51665 324 aa0.67□□□□□ -2.3
CASC4-210ENST00000559550 ERHP84090 104 aaKnown RBP0.67□□□□□ -2.3
CASC4-210ENST00000559550 PRB3Q04118 309 aaPredicted RBP0.67□□□□□ -2.3
CASC4-210ENST00000559550 SLC38A11Q08AI6 406 aa0.67□□□□□ -2.3
CASC4-210ENST00000559550 TMEM31Q5JXX7 168 aa0.67□□□□□ -2.3
CASC4-210ENST00000559550 TTC33Q6PID6 262 aaPredicted RBP0.67□□□□□ -2.3
CASC4-210ENST00000559550 HHLA2Q9UM44 414 aa0.67□□□□□ -2.3
CASC4-210ENST00000559550 FAM215AQ9Y5M1 114 aa0.67□□□□□ -2.3
CASC4-210ENST00000559550 CLUHO75153 1309 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 OR11H12B2RN74 326 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 SLC17A3O00476 420 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 STK16O75716 305 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 ASS1P00966 412 aaKnown RBP0.66□□□□□ -2.3
CASC4-210ENST00000559550 IGLV3-27P01718 113 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 IGHV1-69P01742 117 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 SLC35E2BP0CK96 405 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 NQO2P16083 231 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 ATP6V0CP27449 155 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 XCL1P47992 114 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 IDH3GP51553 393 aaPredicted RBP0.66□□□□□ -2.3
CASC4-210ENST00000559550 RELAQ04206 551 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 STX3Q13277 289 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 NUMA1Q14980 2115 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 CNEP1R1Q8N9A8 125 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 OR11H2Q8NH07 326 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 LHFPL5Q8TAF8 219 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 TNFAIP8L1Q8WVP5 186 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 RORBQ92753 470 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 MSANTD3Q96H12 275 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 SLC35G5Q96KT7 338 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 TMEM56Q96MV1 263 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 MIEN1Q9BRT3 115 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 GNB1LQ9BYB4 327 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 COMMD9Q9P000 198 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 SCN9AQ15858 1988 aa0.66□□□□□ -2.3
CASC4-210ENST00000559550 TENM3Q9P273 2699 aa0.65□□□□□ -2.3
CASC4-210ENST00000559550 DISP1Q96F81 1524 aa0.65□□□□□ -2.31
CASC4-210ENST00000559550 TRAV41A0A0B4J266 112 aa0.65□□□□□ -2.31
CASC4-210ENST00000559550 SULT1C2O00338 296 aa0.65□□□□□ -2.31
CASC4-210ENST00000559550 PHYHO14832 338 aa0.65□□□□□ -2.31
CASC4-210ENST00000559550 PGLYRP1O75594 196 aaPredicted RBP0.65□□□□□ -2.31
CASC4-210ENST00000559550 TNFAIP8O95379 198 aa0.65□□□□□ -2.31
CASC4-210ENST00000559550 C1QCP02747 245 aa0.65□□□□□ -2.31
CASC4-210ENST00000559550 GP1BAP07359 652 aa0.65□□□□□ -2.31
CASC4-210ENST00000559550 CD7P09564 240 aa0.65□□□□□ -2.31
CASC4-210ENST00000559550 CCDC172P0C7W6 258 aa0.65□□□□□ -2.31
CASC4-210ENST00000559550 ADORA1P30542 326 aa0.65□□□□□ -2.31
CASC4-210ENST00000559550 C1DQ13901 141 aaKnown RBP0.65□□□□□ -2.31
CASC4-210ENST00000559550 MESTQ5EB52 335 aa0.65□□□□□ -2.31
CASC4-210ENST00000559550 DRAM2Q6UX65 266 aa0.65□□□□□ -2.31
CASC4-210ENST00000559550 CCDC112Q8NEF3 446 aa0.65□□□□□ -2.31
CASC4-210ENST00000559550 OR5J2Q8NH18 312 aa0.65□□□□□ -2.31
CASC4-210ENST00000559550 CYGBQ8WWM9 190 aa0.65□□□□□ -2.31
CASC4-210ENST00000559550 ASB17Q8WXJ9 295 aa0.65□□□□□ -2.31
CASC4-210ENST00000559550 ACY3Q96HD9 319 aa0.65□□□□□ -2.31
CASC4-210ENST00000559550 SERPINB11Q96P15 392 aa0.65□□□□□ -2.31
CASC4-210ENST00000559550 HBEGFQ99075 208 aa0.65□□□□□ -2.31
CASC4-210ENST00000559550 BABAM2Q9NXR7 383 aa0.65□□□□□ -2.31
CASC4-210ENST00000559550 DSCAMO60469 2012 aa0.65□□□□□ -2.31
CASC4-210ENST00000559550 A0A1W2PQD3 144 aa0.64□□□□□ -2.31
CASC4-210ENST00000559550 MPZL2O60487 215 aa0.64□□□□□ -2.31
CASC4-210ENST00000559550 BRI3O95415 125 aa0.64□□□□□ -2.31
CASC4-210ENST00000559550 CRYBA1P05813 215 aa0.64□□□□□ -2.31
CASC4-210ENST00000559550 HSPA9P38646 679 aaKnown RBP0.64□□□□□ -2.31
CASC4-210ENST00000559550 OR4D1Q15615 310 aa0.64□□□□□ -2.31
CASC4-210ENST00000559550 TBC1D28Q2M2D7 210 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms