RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 HOGA1Q86XE5 327 aa16.25■□□□□ 0.19
TSPAN3-207ENST00000559494 OR10J5Q8NHC4 309 aa16.25■□□□□ 0.19
TSPAN3-207ENST00000559494 EDARADDQ8WWZ3 215 aa16.25■□□□□ 0.19
TSPAN3-207ENST00000559494 ABHD14BQ96IU4 210 aa16.25■□□□□ 0.19
TSPAN3-207ENST00000559494 RNF150Q9ULK6 438 aa16.25■□□□□ 0.19
TSPAN3-207ENST00000559494 IGHV3-72A0A0B4J1Y9 119 aa16.24■□□□□ 0.19
TSPAN3-207ENST00000559494 MEIS3P1A6NDR6 274 aa16.24■□□□□ 0.19
TSPAN3-207ENST00000559494 NDUFA7O95182 113 aa16.24■□□□□ 0.19
TSPAN3-207ENST00000559494 FCER2P06734 321 aa16.24■□□□□ 0.19
TSPAN3-207ENST00000559494 SNRNP70P08621 437 aaKnown RBP16.24■□□□□ 0.19
TSPAN3-207ENST00000559494 COMPP49747 757 aaPredicted RBP16.24■□□□□ 0.19
TSPAN3-207ENST00000559494 CNIH2Q6PI25 160 aa16.24■□□□□ 0.19
TSPAN3-207ENST00000559494 Q6ZSV7 163 aa16.24■□□□□ 0.19
TSPAN3-207ENST00000559494 TGIF2LXQ8IUE1 241 aa16.24■□□□□ 0.19
TSPAN3-207ENST00000559494 ZNF251Q9BRH9 671 aa16.24■□□□□ 0.19
TSPAN3-207ENST00000559494 SLIRPQ9GZT3 109 aaKnown RBP16.24■□□□□ 0.19
TSPAN3-207ENST00000559494 RAB18Q9NP72 206 aa16.24■□□□□ 0.19
TSPAN3-207ENST00000559494 ANXA10Q9UJ72 324 aa16.24■□□□□ 0.19
TSPAN3-207ENST00000559494 SAA2-SAA4A0A096LPE2 208 aa16.23■□□□□ 0.19
TSPAN3-207ENST00000559494 ZNF736B4DX44 427 aaPredicted RBP16.23■□□□□ 0.19
TSPAN3-207ENST00000559494 FAM106CPP0CH98 169 aa16.23■□□□□ 0.19
TSPAN3-207ENST00000559494 SAA2P0DJI9 122 aaPredicted RBP16.23■□□□□ 0.19
TSPAN3-207ENST00000559494 PRSS3P35030 304 aa16.23■□□□□ 0.19
TSPAN3-207ENST00000559494 CBX5P45973 191 aa16.23■□□□□ 0.19
TSPAN3-207ENST00000559494 RAG2P55895 527 aa16.23■□□□□ 0.19
TSPAN3-207ENST00000559494 FOXL1Q12952 345 aa16.23■□□□□ 0.19
TSPAN3-207ENST00000559494 ZNF833PQ6ZTB9 187 aa16.23■□□□□ 0.19
TSPAN3-207ENST00000559494 H1FOOQ8IZA3 346 aaPredicted RBP16.23■□□□□ 0.19
TSPAN3-207ENST00000559494 BEST4Q8NFU0 473 aa16.23■□□□□ 0.19
TSPAN3-207ENST00000559494 RBMXL1Q96E39 390 aaKnown RBP16.23■□□□□ 0.19
TSPAN3-207ENST00000559494 DCUN1D5Q9BTE7 237 aa16.23■□□□□ 0.19
TSPAN3-207ENST00000559494 NDUFA13Q9P0J0 144 aa16.23■□□□□ 0.19
TSPAN3-207ENST00000559494 PIPOXQ9P0Z9 390 aa16.23■□□□□ 0.19
TSPAN3-207ENST00000559494 RAB29O14966 203 aa16.22■□□□□ 0.19
TSPAN3-207ENST00000559494 RGS5O15539 181 aa16.22■□□□□ 0.19
TSPAN3-207ENST00000559494 PROP1O75360 226 aa16.22■□□□□ 0.19
TSPAN3-207ENST00000559494 TSPAN9O75954 239 aa16.22■□□□□ 0.19
TSPAN3-207ENST00000559494 CTXN2P0C2S0 81 aa16.22■□□□□ 0.19
TSPAN3-207ENST00000559494 MDKP21741 143 aaPredicted RBP16.22■□□□□ 0.19
TSPAN3-207ENST00000559494 EBI3Q14213 229 aa16.22■□□□□ 0.19
TSPAN3-207ENST00000559494 AWAT1Q58HT5 328 aa16.22■□□□□ 0.19
TSPAN3-207ENST00000559494 RPL39P5Q59GN2 51 aa16.22■□□□□ 0.19
TSPAN3-207ENST00000559494 SNX29P2Q8IUI4 249 aa16.22■□□□□ 0.19
TSPAN3-207ENST00000559494 LAX1Q8IWV1 398 aa16.22■□□□□ 0.19
TSPAN3-207ENST00000559494 SPATA3Q8NHX4 192 aa16.22■□□□□ 0.19
TSPAN3-207ENST00000559494 SNAPC3Q92966 411 aa16.22■□□□□ 0.19
TSPAN3-207ENST00000559494 DGCR14Q96DF8 476 aaKnown RBP16.22■□□□□ 0.19
TSPAN3-207ENST00000559494 GINS4Q9BRT9 223 aa16.22■□□□□ 0.19
TSPAN3-207ENST00000559494 GHITMQ9H3K2 345 aa16.22■□□□□ 0.19
TSPAN3-207ENST00000559494 EXTL2Q9UBQ6 330 aa16.22■□□□□ 0.19
TSPAN3-207ENST00000559494 TXNL1O43396 289 aa16.21■□□□□ 0.19
TSPAN3-207ENST00000559494 IGKV1D-33P01593 117 aa16.21■□□□□ 0.19
TSPAN3-207ENST00000559494 IGKV1-33P01594 117 aa16.21■□□□□ 0.19
TSPAN3-207ENST00000559494 LPLP06858 475 aa16.21■□□□□ 0.19
TSPAN3-207ENST00000559494 OR8U9P0C7N5 309 aa16.21■□□□□ 0.19
TSPAN3-207ENST00000559494 CD1BP29016 333 aa16.21■□□□□ 0.19
TSPAN3-207ENST00000559494 HNF4GQ14541 408 aa16.21■□□□□ 0.19
TSPAN3-207ENST00000559494 OR8U1Q8NH10 309 aa16.21■□□□□ 0.19
TSPAN3-207ENST00000559494 OR4F5Q8NH21 305 aa16.21■□□□□ 0.19
TSPAN3-207ENST00000559494 GPX8Q8TED1 209 aa16.21■□□□□ 0.19
TSPAN3-207ENST00000559494 RBM14Q96PK6 669 aaKnown RBP16.21■□□□□ 0.19
TSPAN3-207ENST00000559494 NABP2Q9BQ15 211 aa16.21■□□□□ 0.19
TSPAN3-207ENST00000559494 MRPL20Q9BYC9 149 aaKnown RBP16.21■□□□□ 0.19
TSPAN3-207ENST00000559494 NXF2Q9GZY0 626 aaKnown RBP16.21■□□□□ 0.19
TSPAN3-207ENST00000559494 C16orf95Q9H693 158 aa16.21■□□□□ 0.19
TSPAN3-207ENST00000559494 ANAPC10Q9UM13 185 aa16.21■□□□□ 0.19
TSPAN3-207ENST00000559494 A6NHS1 94 aa16.2■□□□□ 0.18
TSPAN3-207ENST00000559494 HES1Q14469 280 aa16.2■□□□□ 0.18
TSPAN3-207ENST00000559494 LINC01006Q8NI28 216 aa16.2■□□□□ 0.18
TSPAN3-207ENST00000559494 EAF1Q96JC9 268 aaPredicted RBP16.2■□□□□ 0.18
TSPAN3-207ENST00000559494 S1PR3Q99500 378 aa16.2■□□□□ 0.18
TSPAN3-207ENST00000559494 SLC25A33Q9BSK2 321 aa16.2■□□□□ 0.18
TSPAN3-207ENST00000559494 MMP24Q9Y5R2 645 aa16.2■□□□□ 0.18
TSPAN3-207ENST00000559494 OR2F2O95006 317 aa16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 NAT1P18440 290 aa16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 NFYAP23511 347 aaPredicted RBP16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 BLCAPP62952 87 aa16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 LSAMPQ13449 338 aa16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 FAM71F2Q6NXP2 309 aa16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 C12orf54Q6X4T0 127 aa16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 C16orf82Q7Z2V1 217 aa16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 ABHD1Q96SE0 405 aa16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 NPFFR1Q9GZQ6 430 aa16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 C6orf62Q9GZU0 229 aaPredicted RBP16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 BEX1Q9HBH7 125 aa16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 IFT46Q9NQC8 304 aa16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 ZNF221Q9UK13 617 aa16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 ADAM30Q9UKF2 790 aa16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 GAB2Q9UQC2 676 aa16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 CLPSL1A2RUU4 121 aa16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 AMY1AP04745 511 aa16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 AMY2AP04746 511 aa16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 CT45A6P0DMU7 189 aa16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 CT45A5P0DMU8 189 aa16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 CT45A7P0DMV0 189 aa16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 TMEM11P17152 192 aa16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 GPR12P47775 334 aa16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 ARPC4P59998 168 aa16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 Q6ZS46 218 aa16.19■□□□□ 0.18
TSPAN3-207ENST00000559494 LYSMD2Q8IV50 215 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms