RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 PF4V1P10720 104 aa12.14□□□□□ -0.47
SPG11-210ENST00000558319 GLULP15104 373 aa12.14□□□□□ -0.47
SPG11-210ENST00000558319 H1FOOQ8IZA3 346 aaPredicted RBP12.14□□□□□ -0.47
SPG11-210ENST00000558319 SPAG8Q99932 426 aaPredicted RBP12.14□□□□□ -0.47
SPG11-210ENST00000558319 DTX4Q9Y2E6 619 aa12.14□□□□□ -0.47
SPG11-210ENST00000558319 HOXD4P09016 255 aaPredicted RBP12.14□□□□□ -0.47
SPG11-210ENST00000558319 CEACAM3P40198 252 aa12.14□□□□□ -0.47
SPG11-210ENST00000558319 PMCHL1Q16048 86 aa12.14□□□□□ -0.47
SPG11-210ENST00000558319 DEGS2Q6QHC5 323 aa12.14□□□□□ -0.47
SPG11-210ENST00000558319 GPBAR1Q8TDU6 330 aa12.14□□□□□ -0.47
SPG11-210ENST00000558319 C14orf144Q96I85 54 aa12.14□□□□□ -0.47
SPG11-210ENST00000558319 A0A1W2PRX2 142 aa12.13□□□□□ -0.47
SPG11-210ENST00000558319 C19orf54Q5BKX5 351 aa12.13□□□□□ -0.47
SPG11-210ENST00000558319 BIVMQ86UB2 503 aa12.13□□□□□ -0.47
SPG11-210ENST00000558319 NRXN3Q9Y4C0 1643 aa12.13□□□□□ -0.47
SPG11-210ENST00000558319 A0A1B0GU03 582 aa12.13□□□□□ -0.47
SPG11-210ENST00000558319 UBE2L6O14933 153 aa12.13□□□□□ -0.47
SPG11-210ENST00000558319 SSTR5P35346 364 aa12.13□□□□□ -0.47
SPG11-210ENST00000558319 NUP214P35658 2090 aaPredicted RBP12.13□□□□□ -0.47
SPG11-210ENST00000558319 RELQ04864 619 aaPredicted RBP12.13□□□□□ -0.47
SPG11-210ENST00000558319 ABHD14BQ96IU4 210 aa12.13□□□□□ -0.47
SPG11-210ENST00000558319 LRRC3BQ96PB8 259 aa12.13□□□□□ -0.47
SPG11-210ENST00000558319 WBP1LQ9NX94 342 aa12.13□□□□□ -0.47
SPG11-210ENST00000558319 SLC25A10Q9UBX3 287 aaPredicted RBP12.13□□□□□ -0.47
SPG11-210ENST00000558319 AMY1AP04745 511 aa12.13□□□□□ -0.47
SPG11-210ENST00000558319 VSIG8P0DPA2 414 aa12.13□□□□□ -0.47
SPG11-210ENST00000558319 COX6B1P14854 86 aa12.13□□□□□ -0.47
SPG11-210ENST00000558319 MAS1LP35410 378 aa12.13□□□□□ -0.47
SPG11-210ENST00000558319 RBM11P57052 281 aaKnown RBP12.13□□□□□ -0.47
SPG11-210ENST00000558319 IFITM2Q01629 132 aa12.13□□□□□ -0.47
SPG11-210ENST00000558319 SLC25A53Q5H9E4 307 aa12.13□□□□□ -0.47
SPG11-210ENST00000558319 LGALS3P17931 250 aaKnown RBP12.13□□□□□ -0.47
SPG11-210ENST00000558319 ARF6P62330 175 aa12.13□□□□□ -0.47
SPG11-210ENST00000558319 ZNF826PQ6ZT77 177 aa12.13□□□□□ -0.47
SPG11-210ENST00000558319 VN1R4Q7Z5H5 301 aa12.13□□□□□ -0.47
SPG11-210ENST00000558319 HIGD1AQ9Y241 93 aa12.13□□□□□ -0.47
SPG11-210ENST00000558319 MDC1Q14676 2089 aaKnown RBP12.13□□□□□ -0.47
SPG11-210ENST00000558319 C2orf83Q53S99 150 aa12.12□□□□□ -0.47
SPG11-210ENST00000558319 WNT5BQ9H1J7 359 aa12.12□□□□□ -0.47
SPG11-210ENST00000558319 IGHV3OR16-13A0A075B7E8 117 aa12.12□□□□□ -0.47
SPG11-210ENST00000558319 IGHV3-74A0A0B4J1X5 117 aa12.12□□□□□ -0.47
SPG11-210ENST00000558319 ZNF735P0CB33 412 aa12.12□□□□□ -0.47
SPG11-210ENST00000558319 RFLNBQ8N5W9 214 aa12.12□□□□□ -0.47
SPG11-210ENST00000558319 KCNK7Q9Y2U2 307 aa12.12□□□□□ -0.47
SPG11-210ENST00000558319 J3QR06 171 aa12.12□□□□□ -0.47
SPG11-210ENST00000558319 ARID1AO14497 2285 aa12.12□□□□□ -0.47
SPG11-210ENST00000558319 TMEM210A6NLX4 147 aa12.12□□□□□ -0.47
SPG11-210ENST00000558319 FOLR2P14207 255 aa12.12□□□□□ -0.47
SPG11-210ENST00000558319 SRD5A2P31213 254 aa12.12□□□□□ -0.47
SPG11-210ENST00000558319 CDX1P47902 265 aaPredicted RBP12.12□□□□□ -0.47
SPG11-210ENST00000558319 TM4SF20Q53R12 229 aa12.12□□□□□ -0.47
SPG11-210ENST00000558319 PGLYRP3Q96LB9 341 aa12.12□□□□□ -0.47
SPG11-210ENST00000558319 TBL2Q9Y4P3 447 aaKnown RBP12.12□□□□□ -0.47
SPG11-210ENST00000558319 RRN3P1Q2M238 152 aa12.12□□□□□ -0.47
SPG11-210ENST00000558319 C10orf111Q8N326 155 aa12.12□□□□□ -0.47
SPG11-210ENST00000558319 ZNF385AQ96PM9 386 aaKnown RBP12.12□□□□□ -0.47
SPG11-210ENST00000558319 NRAPQ86VF7 1730 aa12.12□□□□□ -0.47
SPG11-210ENST00000558319 CLDN14O95500 239 aa12.12□□□□□ -0.47
SPG11-210ENST00000558319 SMIM13P0DJ93 91 aa12.12□□□□□ -0.47
SPG11-210ENST00000558319 RPL34P49207 117 aaKnown RBP12.12□□□□□ -0.47
SPG11-210ENST00000558319 NUBP1P53384 320 aa12.12□□□□□ -0.47
SPG11-210ENST00000558319 FAM169BQ8N8A8 192 aa12.12□□□□□ -0.47
SPG11-210ENST00000558319 PLCH1Q4KWH8 1693 aa12.11□□□□□ -0.47
SPG11-210ENST00000558319 ZPLD1Q8TCW7 415 aa12.11□□□□□ -0.47
SPG11-210ENST00000558319 RNF7Q9UBF6 113 aa12.11□□□□□ -0.47
SPG11-210ENST00000558319 PEX11BO96011 259 aa12.11□□□□□ -0.47
SPG11-210ENST00000558319 VSTM2AQ8TAG5 236 aa12.11□□□□□ -0.47
SPG11-210ENST00000558319 HKR1P10072 659 aa12.11□□□□□ -0.47
SPG11-210ENST00000558319 TTTY12Q9BZ98 90 aa12.11□□□□□ -0.47
SPG11-210ENST00000558319 SIRT4Q9Y6E7 314 aaPredicted RBP12.11□□□□□ -0.47
SPG11-210ENST00000558319 SCN9AQ15858 1988 aa12.11□□□□□ -0.47
SPG11-210ENST00000558319 KIAA0100Q14667 2235 aaKnown RBP12.11□□□□□ -0.47
SPG11-210ENST00000558319 ZFC3H1O60293 1989 aaKnown RBP12.11□□□□□ -0.47
SPG11-210ENST00000558319 CENPVL1A0A0U1RR11 272 aa12.11□□□□□ -0.47
SPG11-210ENST00000558319 A8MWL6 223 aa12.11□□□□□ -0.47
SPG11-210ENST00000558319 RECKO95980 971 aa12.11□□□□□ -0.47
SPG11-210ENST00000558319 HSPB1P04792 205 aaKnown RBP12.11□□□□□ -0.47
SPG11-210ENST00000558319 APCDD1LQ8NCL9 501 aa12.11□□□□□ -0.47
SPG11-210ENST00000558319 TMEM171Q8WVE6 324 aa12.11□□□□□ -0.47
SPG11-210ENST00000558319 IGHV3-49A0A0A0MS15 119 aa12.1□□□□□ -0.47
SPG11-210ENST00000558319 LINC00469Q8N7U9 141 aa12.1□□□□□ -0.47
SPG11-210ENST00000558319 TMEM52Q8NDY8 209 aa12.1□□□□□ -0.47
SPG11-210ENST00000558319 KLHDC2Q9Y2U9 406 aa12.1□□□□□ -0.47
SPG11-210ENST00000558319 RBFOX2O43251 390 aaKnown RBP eCLIP12.1□□□□□ -0.47
SPG11-210ENST00000558319 IL4P05112 153 aa12.1□□□□□ -0.47
SPG11-210ENST00000558319 TMEM95Q3KNT9 176 aa12.1□□□□□ -0.47
SPG11-210ENST00000558319 CDC42EP3Q9UKI2 254 aa12.1□□□□□ -0.47
SPG11-210ENST00000558319 PRNDQ9UKY0 176 aa12.1□□□□□ -0.47
SPG11-210ENST00000558319 SYNGR1O43759 233 aa12.1□□□□□ -0.47
SPG11-210ENST00000558319 OR2H1Q9GZK4 316 aa12.1□□□□□ -0.47
SPG11-210ENST00000558319 RNF122Q9H9V4 155 aa12.1□□□□□ -0.47
SPG11-210ENST00000558319 GPR35Q9HC97 309 aa12.1□□□□□ -0.47
SPG11-210ENST00000558319 GSN-AS1Q9NRJ2 163 aa12.1□□□□□ -0.47
SPG11-210ENST00000558319 MOSPD3O75425 235 aa12.1□□□□□ -0.47
SPG11-210ENST00000558319 CDS2O95674 445 aa12.1□□□□□ -0.47
SPG11-210ENST00000558319 RIPPLY3P57055 190 aa12.1□□□□□ -0.47
SPG11-210ENST00000558319 FAM53AQ6NSI3 398 aaPredicted RBP12.1□□□□□ -0.47
SPG11-210ENST00000558319 SCN2AQ99250 2005 aa12.1□□□□□ -0.47
SPG11-210ENST00000558319 TYMSP04818 313 aa12.1□□□□□ -0.47
SPG11-210ENST00000558319 TRA2AQ13595 282 aaKnown RBP eCLIP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms