RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 CREB3L1Q96BA8 519 aa12.35□□□□□ -0.43
NEDD1-213ENST00000557644 MALSU1Q96EH3 234 aa12.35□□□□□ -0.43
NEDD1-213ENST00000557644 SAA2-SAA4A0A096LPE2 208 aa12.34□□□□□ -0.43
NEDD1-213ENST00000557644 TUSC2O75896 110 aa12.34□□□□□ -0.43
NEDD1-213ENST00000557644 FBP1P09467 338 aa12.34□□□□□ -0.43
NEDD1-213ENST00000557644 SAA2P0DJI9 122 aaPredicted RBP12.34□□□□□ -0.43
NEDD1-213ENST00000557644 AADACP22760 399 aa12.34□□□□□ -0.43
NEDD1-213ENST00000557644 SSBP1Q04837 148 aaKnown RBP12.34□□□□□ -0.43
NEDD1-213ENST00000557644 ZNF660Q6AZW8 331 aaPredicted RBP12.34□□□□□ -0.43
NEDD1-213ENST00000557644 TMEM229BQ8NBD8 167 aa12.34□□□□□ -0.43
NEDD1-213ENST00000557644 RPEQ96AT9 228 aa12.34□□□□□ -0.43
NEDD1-213ENST00000557644 RBMXL1Q96E39 390 aaKnown RBP12.34□□□□□ -0.43
NEDD1-213ENST00000557644 OR2W1Q9Y3N9 320 aa12.34□□□□□ -0.43
NEDD1-213ENST00000557644 AMMECR1Q9Y4X0 333 aaPredicted RBP12.34□□□□□ -0.43
NEDD1-213ENST00000557644 RAB13P51153 203 aa12.34□□□□□ -0.43
NEDD1-213ENST00000557644 TAS2R19P59542 299 aa12.34□□□□□ -0.43
NEDD1-213ENST00000557644 RPL39P5Q59GN2 51 aa12.34□□□□□ -0.43
NEDD1-213ENST00000557644 STEAP1BQ6NZ63 245 aa12.34□□□□□ -0.43
NEDD1-213ENST00000557644 GDPD1Q8N9F7 314 aa12.34□□□□□ -0.43
NEDD1-213ENST00000557644 ZNF2Q9BSG1 426 aaPredicted RBP12.34□□□□□ -0.43
NEDD1-213ENST00000557644 OR2D2Q9H210 308 aa12.34□□□□□ -0.43
NEDD1-213ENST00000557644 RBM7Q9Y580 266 aaKnown RBP12.34□□□□□ -0.43
NEDD1-213ENST00000557644 ANKRD20A5PA0PJZ0 165 aa12.33□□□□□ -0.44
NEDD1-213ENST00000557644 ITGB1BP1O14713 200 aa12.33□□□□□ -0.44
NEDD1-213ENST00000557644 HSD17B6O14756 317 aa12.33□□□□□ -0.44
NEDD1-213ENST00000557644 CD74P04233 296 aa12.33□□□□□ -0.44
NEDD1-213ENST00000557644 CSF1P09603 554 aa12.33□□□□□ -0.44
NEDD1-213ENST00000557644 RAB7AP51149 207 aa12.33□□□□□ -0.44
NEDD1-213ENST00000557644 RNASE10Q5GAN6 216 aaKnown RBP12.33□□□□□ -0.44
NEDD1-213ENST00000557644 DHRS11Q6UWP2 260 aa12.33□□□□□ -0.44
NEDD1-213ENST00000557644 TOMM40LQ969M1 308 aa12.33□□□□□ -0.44
NEDD1-213ENST00000557644 PROP1O75360 226 aa12.33□□□□□ -0.44
NEDD1-213ENST00000557644 RAB3DO95716 219 aa12.33□□□□□ -0.44
NEDD1-213ENST00000557644 PPYP01298 95 aa12.33□□□□□ -0.44
NEDD1-213ENST00000557644 CEACAM3P40198 252 aa12.33□□□□□ -0.44
NEDD1-213ENST00000557644 ZNF137PP52743 207 aa12.33□□□□□ -0.44
NEDD1-213ENST00000557644 FXYD4P59646 89 aa12.33□□□□□ -0.44
NEDD1-213ENST00000557644 VAX1Q5SQQ9 334 aa12.33□□□□□ -0.44
NEDD1-213ENST00000557644 GIMAP1Q8WWP7 306 aa12.33□□□□□ -0.44
NEDD1-213ENST00000557644 ZDHHC16Q969W1 377 aa12.33□□□□□ -0.44
NEDD1-213ENST00000557644 C5orf30Q96GV9 206 aa12.33□□□□□ -0.44
NEDD1-213ENST00000557644 DUX5Q96PT3 197 aa12.33□□□□□ -0.44
NEDD1-213ENST00000557644 ZNF251Q9BRH9 671 aa12.33□□□□□ -0.44
NEDD1-213ENST00000557644 MEGF9Q9H1U4 602 aa12.33□□□□□ -0.44
NEDD1-213ENST00000557644 RAB29O14966 203 aa12.32□□□□□ -0.44
NEDD1-213ENST00000557644 TSPAN5P62079 268 aa12.32□□□□□ -0.44
NEDD1-213ENST00000557644 SCGB2A2Q13296 93 aa12.32□□□□□ -0.44
NEDD1-213ENST00000557644 ACTBL2Q562R1 376 aa12.32□□□□□ -0.44
NEDD1-213ENST00000557644 OR4C16Q8NGL9 310 aa12.32□□□□□ -0.44
NEDD1-213ENST00000557644 OR56B4Q8NH76 319 aa12.32□□□□□ -0.44
NEDD1-213ENST00000557644 RTN4IP1Q8WWV3 396 aaPredicted RBP12.32□□□□□ -0.44
NEDD1-213ENST00000557644 S100ZQ8WXG8 99 aa12.32□□□□□ -0.44
NEDD1-213ENST00000557644 TAS2R8Q9NYW2 309 aa12.32□□□□□ -0.44
NEDD1-213ENST00000557644 ZNF107Q9UII5 783 aaPredicted RBP12.32□□□□□ -0.44
NEDD1-213ENST00000557644 A0A1W2PPI3 338 aa12.32□□□□□ -0.44
NEDD1-213ENST00000557644 CD24P25063 80 aa12.32□□□□□ -0.44
NEDD1-213ENST00000557644 IL3RAP26951 378 aa12.32□□□□□ -0.44
NEDD1-213ENST00000557644 GPR12P47775 334 aa12.32□□□□□ -0.44
NEDD1-213ENST00000557644 LUMP51884 338 aaPredicted RBP12.32□□□□□ -0.44
NEDD1-213ENST00000557644 LINC00205P59089 165 aa12.32□□□□□ -0.44
NEDD1-213ENST00000557644 KLF9Q13886 244 aaPredicted RBP12.32□□□□□ -0.44
NEDD1-213ENST00000557644 Q6YL49 198 aa12.32□□□□□ -0.44
NEDD1-213ENST00000557644 TMEM17Q86X19 198 aa12.32□□□□□ -0.44
NEDD1-213ENST00000557644 OR6F1Q8NGZ6 308 aa12.32□□□□□ -0.44
NEDD1-213ENST00000557644 PRDM13Q9H4Q3 707 aa12.32□□□□□ -0.44
NEDD1-213ENST00000557644 TNFRSF19Q9NS68 423 aa12.32□□□□□ -0.44
NEDD1-213ENST00000557644 PIPOXQ9P0Z9 390 aa12.32□□□□□ -0.44
NEDD1-213ENST00000557644 HOXA3O43365 443 aaPredicted RBP12.31□□□□□ -0.44
NEDD1-213ENST00000557644 IGHV4-59P01825 116 aa12.31□□□□□ -0.44
NEDD1-213ENST00000557644 IFNA6P05013 189 aa12.31□□□□□ -0.44
NEDD1-213ENST00000557644 TBPP20226 339 aa12.31□□□□□ -0.44
NEDD1-213ENST00000557644 FBLN7Q53RD9 439 aa12.31□□□□□ -0.44
NEDD1-213ENST00000557644 ZNF833PQ6ZTB9 187 aa12.31□□□□□ -0.44
NEDD1-213ENST00000557644 TOMM5Q8N4H5 51 aa12.31□□□□□ -0.44
NEDD1-213ENST00000557644 DRAXINQ8NBI3 349 aaPredicted RBP12.31□□□□□ -0.44
NEDD1-213ENST00000557644 SECTM1Q8WVN6 248 aa12.31□□□□□ -0.44
NEDD1-213ENST00000557644 SSX3Q99909 188 aa12.31□□□□□ -0.44
NEDD1-213ENST00000557644 ESM1Q9NQ30 184 aa12.31□□□□□ -0.44
NEDD1-213ENST00000557644 SDHAF2Q9NX18 166 aa12.31□□□□□ -0.44
NEDD1-213ENST00000557644 ZNF221Q9UK13 617 aa12.31□□□□□ -0.44
NEDD1-213ENST00000557644 IGHV3-72A0A0B4J1Y9 119 aa12.3□□□□□ -0.44
NEDD1-213ENST00000557644 IGHV1-3A0A0C4DH29 117 aa12.3□□□□□ -0.44
NEDD1-213ENST00000557644 TIMM23O14925 209 aa12.3□□□□□ -0.44
NEDD1-213ENST00000557644 IGLV2-14P01704 120 aa12.3□□□□□ -0.44
NEDD1-213ENST00000557644 ZNF735P0CB33 412 aa12.3□□□□□ -0.44
NEDD1-213ENST00000557644 AKAIN1P0CW23 69 aa12.3□□□□□ -0.44
NEDD1-213ENST00000557644 IL7P13232 177 aa12.3□□□□□ -0.44
NEDD1-213ENST00000557644 TRIQKQ629K1 86 aa12.3□□□□□ -0.44
NEDD1-213ENST00000557644 TGIF2LXQ8IUE1 241 aa12.3□□□□□ -0.44
NEDD1-213ENST00000557644 DRAM1Q8N682 238 aa12.3□□□□□ -0.44
NEDD1-213ENST00000557644 PIFOQ8TCI5 191 aa12.3□□□□□ -0.44
NEDD1-213ENST00000557644 MRPL20Q9BYC9 149 aaKnown RBP12.3□□□□□ -0.44
NEDD1-213ENST00000557644 LINC00854A0A1B0GVQ3 168 aa12.3□□□□□ -0.44
NEDD1-213ENST00000557644 OR5H14A6NHG9 310 aa12.3□□□□□ -0.44
NEDD1-213ENST00000557644 GAPDHP04406 335 aaKnown RBP12.3□□□□□ -0.44
NEDD1-213ENST00000557644 AMY2AP04746 511 aa12.3□□□□□ -0.44
NEDD1-213ENST00000557644 IER3P46695 156 aa12.3□□□□□ -0.44
NEDD1-213ENST00000557644 PPP5CP53041 499 aa12.3□□□□□ -0.44
NEDD1-213ENST00000557644 SRSF2Q01130 221 aaKnown RBP12.3□□□□□ -0.44
NEDD1-213ENST00000557644 ZNF816Q0VGE8 651 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms