RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 NPBQ8NG41 125 aa11.05□□□□□ -0.64
SNX6-210ENST00000557341 OR11H1Q8NG94 326 aa11.05□□□□□ -0.64
SNX6-210ENST00000557341 RITA1Q96K30 269 aa11.05□□□□□ -0.64
SNX6-210ENST00000557341 LPAR5Q9H1C0 372 aa11.05□□□□□ -0.64
SNX6-210ENST00000557341 RIMS4Q9H426 269 aaPredicted RBP11.05□□□□□ -0.64
SNX6-210ENST00000557341 PLGRKTQ9HBL7 147 aa11.05□□□□□ -0.64
SNX6-210ENST00000557341 SLC23A1Q9UHI7 598 aa11.05□□□□□ -0.64
SNX6-210ENST00000557341 TPRKBQ9Y3C4 175 aa11.05□□□□□ -0.64
SNX6-210ENST00000557341 WSB1Q9Y6I7 421 aa11.05□□□□□ -0.64
SNX6-210ENST00000557341 KMT2CQ8NEZ4 4911 aaKnown RBP11.04□□□□□ -0.64
SNX6-210ENST00000557341 SORL1Q92673 2214 aa11.04□□□□□ -0.64
SNX6-210ENST00000557341 A0A0A6YYD4 124 aa11.04□□□□□ -0.64
SNX6-210ENST00000557341 TRBV6-6A0A0A6YYG2 114 aa11.04□□□□□ -0.64
SNX6-210ENST00000557341 SLC17A2O00624 439 aa11.04□□□□□ -0.64
SNX6-210ENST00000557341 ARL6IP5O75915 188 aa11.04□□□□□ -0.64
SNX6-210ENST00000557341 IGLV1-40P01703 118 aa11.04□□□□□ -0.64
SNX6-210ENST00000557341 CD37P11049 281 aa11.04□□□□□ -0.64
SNX6-210ENST00000557341 ARSBP15848 533 aa11.04□□□□□ -0.64
SNX6-210ENST00000557341 PSMA1P25786 263 aaKnown RBP11.04□□□□□ -0.64
SNX6-210ENST00000557341 AQP4P55087 323 aa11.04□□□□□ -0.64
SNX6-210ENST00000557341 HLA-DRB3P79483 266 aa11.04□□□□□ -0.64
SNX6-210ENST00000557341 TRAM1Q15629 374 aa11.04□□□□□ -0.64
SNX6-210ENST00000557341 RPL39P5Q59GN2 51 aa11.04□□□□□ -0.64
SNX6-210ENST00000557341 EDARADDQ8WWZ3 215 aa11.04□□□□□ -0.64
SNX6-210ENST00000557341 TMEM203Q969S6 136 aa11.04□□□□□ -0.64
SNX6-210ENST00000557341 GHITMQ9H3K2 345 aa11.04□□□□□ -0.64
SNX6-210ENST00000557341 GNB4Q9HAV0 340 aa11.04□□□□□ -0.64
SNX6-210ENST00000557341 C12orf4Q9NQ89 552 aa11.04□□□□□ -0.64
SNX6-210ENST00000557341 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.04□□□□□ -0.64
SNX6-210ENST00000557341 AK3Q9UIJ7 227 aa11.04□□□□□ -0.64
SNX6-210ENST00000557341 MGAT4AQ9UM21 535 aa11.04□□□□□ -0.64
SNX6-210ENST00000557341 VSIG4Q9Y279 399 aa11.04□□□□□ -0.64
SNX6-210ENST00000557341 NBEAL2Q6ZNJ1 2754 aa11.03□□□□□ -0.64
SNX6-210ENST00000557341 ANKRD65E5RJM6 399 aa11.03□□□□□ -0.64
SNX6-210ENST00000557341 I3L521 148 aa11.03□□□□□ -0.64
SNX6-210ENST00000557341 ITGB1BP1O14713 200 aa11.03□□□□□ -0.64
SNX6-210ENST00000557341 SOCS1O15524 211 aa11.03□□□□□ -0.64
SNX6-210ENST00000557341 HSPA12AO43301 675 aa11.03□□□□□ -0.64
SNX6-210ENST00000557341 HSMCR30P0CW71 290 aa11.03□□□□□ -0.64
SNX6-210ENST00000557341 ZBTB25P24278 435 aa11.03□□□□□ -0.64
SNX6-210ENST00000557341 NDPQ00604 133 aa11.03□□□□□ -0.64
SNX6-210ENST00000557341 RUNX1Q01196 453 aa11.03□□□□□ -0.64
SNX6-210ENST00000557341 ZNF616Q08AN1 781 aa11.03□□□□□ -0.64
SNX6-210ENST00000557341 PLGLAQ15195 96 aa11.03□□□□□ -0.64
SNX6-210ENST00000557341 P2RY14Q15391 338 aa11.03□□□□□ -0.64
SNX6-210ENST00000557341 ECSCRQ19T08 205 aa11.03□□□□□ -0.64
SNX6-210ENST00000557341 ZNF491Q8N8L2 437 aa11.03□□□□□ -0.64
SNX6-210ENST00000557341 HDHD3Q9BSH5 251 aaPredicted RBP11.03□□□□□ -0.64
SNX6-210ENST00000557341 PARP12Q9H0J9 701 aaKnown RBP11.03□□□□□ -0.64
SNX6-210ENST00000557341 KLK15Q9H2R5 256 aa11.03□□□□□ -0.64
SNX6-210ENST00000557341 HSF4Q9ULV5 492 aa11.03□□□□□ -0.64
SNX6-210ENST00000557341 WASHC3Q9Y3C0 194 aa11.03□□□□□ -0.64
SNX6-210ENST00000557341 A0A1W2PN81 502 aa11.02□□□□□ -0.65
SNX6-210ENST00000557341 H0YJW9 148 aa11.02□□□□□ -0.65
SNX6-210ENST00000557341 H7C2Y5 167 aa11.02□□□□□ -0.65
SNX6-210ENST00000557341 RRHO14718 337 aa11.02□□□□□ -0.65
SNX6-210ENST00000557341 RGS10O43665 173 aa11.02□□□□□ -0.65
SNX6-210ENST00000557341 MC5RP33032 325 aa11.02□□□□□ -0.65
SNX6-210ENST00000557341 CHRNA7P36544 502 aa11.02□□□□□ -0.65
SNX6-210ENST00000557341 ECI1P42126 302 aa11.02□□□□□ -0.65
SNX6-210ENST00000557341 CRIP2P52943 208 aaPredicted RBP11.02□□□□□ -0.65
SNX6-210ENST00000557341 RPS25P62851 125 aaKnown RBP11.02□□□□□ -0.65
SNX6-210ENST00000557341 MLLT11Q13015 90 aaPredicted RBP11.02□□□□□ -0.65
SNX6-210ENST00000557341 TPBGQ13641 420 aa11.02□□□□□ -0.65
SNX6-210ENST00000557341 RAB11BQ15907 218 aa11.02□□□□□ -0.65
SNX6-210ENST00000557341 ZNF260Q3ZCT1 412 aa11.02□□□□□ -0.65
SNX6-210ENST00000557341 GLDNQ6ZMI3 551 aaPredicted RBP11.02□□□□□ -0.65
SNX6-210ENST00000557341 TMEM91Q6ZNR0 172 aa11.02□□□□□ -0.65
SNX6-210ENST00000557341 FAM89BQ8N5H3 189 aa11.02□□□□□ -0.65
SNX6-210ENST00000557341 TCTEX1D1Q8N7M0 179 aa11.02□□□□□ -0.65
SNX6-210ENST00000557341 MINDY2Q8NBR6 621 aa11.02□□□□□ -0.65
SNX6-210ENST00000557341 OR1N2Q8NGR9 330 aa11.02□□□□□ -0.65
SNX6-210ENST00000557341 ABHD14BQ96IU4 210 aa11.02□□□□□ -0.65
SNX6-210ENST00000557341 OR5B12Q96R08 314 aa11.02□□□□□ -0.65
SNX6-210ENST00000557341 PRR25Q96S07 402 aa11.02□□□□□ -0.65
SNX6-210ENST00000557341 GFI1Q99684 422 aa11.02□□□□□ -0.65
SNX6-210ENST00000557341 FBXL15Q9H469 300 aa11.02□□□□□ -0.65
SNX6-210ENST00000557341 DUSP21Q9H596 190 aa11.02□□□□□ -0.65
SNX6-210ENST00000557341 ISYNA1Q9NPH2 558 aa11.02□□□□□ -0.65
SNX6-210ENST00000557341 OR1A1Q9P1Q5 309 aa11.02□□□□□ -0.65
SNX6-210ENST00000557341 NKX1-2Q9UD57 310 aaPredicted RBP11.02□□□□□ -0.65
SNX6-210ENST00000557341 FOXI3A8MTJ6 420 aaPredicted RBP11.01□□□□□ -0.65
SNX6-210ENST00000557341 RBBP9O75884 186 aa11.01□□□□□ -0.65
SNX6-210ENST00000557341 GSTP1P09211 210 aaKnown RBP11.01□□□□□ -0.65
SNX6-210ENST00000557341 CT45A6P0DMU7 189 aa11.01□□□□□ -0.65
SNX6-210ENST00000557341 CT45A5P0DMU8 189 aa11.01□□□□□ -0.65
SNX6-210ENST00000557341 CT45A7P0DMV0 189 aa11.01□□□□□ -0.65
SNX6-210ENST00000557341 CPEP16870 476 aa11.01□□□□□ -0.65
SNX6-210ENST00000557341 CALRP27797 417 aaKnown RBP11.01□□□□□ -0.65
SNX6-210ENST00000557341 RANBP1P43487 201 aa11.01□□□□□ -0.65
SNX6-210ENST00000557341 VEGFCP49767 419 aa11.01□□□□□ -0.65
SNX6-210ENST00000557341 RAB9AP51151 201 aa11.01□□□□□ -0.65
SNX6-210ENST00000557341 INSL3P51460 131 aa11.01□□□□□ -0.65
SNX6-210ENST00000557341 GNB1P62873 340 aa11.01□□□□□ -0.65
SNX6-210ENST00000557341 KIAA0141Q14154 515 aaPredicted RBP11.01□□□□□ -0.65
SNX6-210ENST00000557341 C19orf54Q5BKX5 351 aa11.01□□□□□ -0.65
SNX6-210ENST00000557341 ASPHD1Q5U4P2 390 aa11.01□□□□□ -0.65
SNX6-210ENST00000557341 ZNF660Q6AZW8 331 aaPredicted RBP11.01□□□□□ -0.65
SNX6-210ENST00000557341 OR5AN1Q8NGI8 311 aa11.01□□□□□ -0.65
SNX6-210ENST00000557341 ABHD5Q8WTS1 349 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms