RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 ZNF184Q99676 751 aaPredicted RBP6.69□□□□□ -1.34
VRK1-206ENST00000557222 TM2D3Q9BRN9 247 aa6.69□□□□□ -1.34
VRK1-206ENST00000557222 ABHD14AQ9BUJ0 271 aa6.69□□□□□ -1.34
VRK1-206ENST00000557222 TOLLIPQ9H0E2 274 aa6.69□□□□□ -1.34
VRK1-206ENST00000557222 PALMDQ9NP74 551 aa6.69□□□□□ -1.34
VRK1-206ENST00000557222 OR2S2Q9NQN1 319 aa6.69□□□□□ -1.34
VRK1-206ENST00000557222 BABAM2Q9NXR7 383 aa6.69□□□□□ -1.34
VRK1-206ENST00000557222 KCNIP1Q9NZI2 227 aa6.69□□□□□ -1.34
VRK1-206ENST00000557222 KIAA1456Q9P272 454 aa6.69□□□□□ -1.34
VRK1-206ENST00000557222 CKLFQ9UBR5 152 aa6.69□□□□□ -1.34
VRK1-206ENST00000557222 JPT1Q9UK76 154 aa6.69□□□□□ -1.34
VRK1-206ENST00000557222 WSB1Q9Y6I7 421 aa6.69□□□□□ -1.34
VRK1-206ENST00000557222 TRBV5-5A0A0J9YX44 114 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 IRGMA1A4Y4 181 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 MAGEA13PA6NCF6 341 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 G3V318 75 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 LDLRAD4O15165 306 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 LGALS1P09382 135 aaKnown RBP6.68□□□□□ -1.34
VRK1-206ENST00000557222 FRMD6-AS1P0C7T7 363 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 SLC2A2P11168 524 aaPredicted RBP6.68□□□□□ -1.34
VRK1-206ENST00000557222 SPNP16150 400 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 MYF6P23409 242 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 YIF1BQ5BJH7 314 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 FAM53AQ6NSI3 398 aaPredicted RBP6.68□□□□□ -1.34
VRK1-206ENST00000557222 CD200R1LQ6Q8B3 271 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 ZNF833PQ6ZTB9 187 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 ODF3L1Q8IXM7 274 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 OR10V1Q8NGI7 309 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 OR4K15Q8NH41 348 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 OR1L1Q8NH94 360 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 UBALD1Q8TB05 177 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 DLX4Q92988 240 aaPredicted RBP6.68□□□□□ -1.34
VRK1-206ENST00000557222 FLYWCH2Q96CP2 140 aaKnown RBP6.68□□□□□ -1.34
VRK1-206ENST00000557222 SMIM19Q96E16 107 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 RDH12Q96NR8 316 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 RNF5Q99942 180 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 NABP2Q9BQ15 211 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 KRTAP3-1Q9BYR8 98 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 ANKRD60Q9BZ19 345 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 TAF9BQ9HBM6 251 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 AMBNQ9NP70 447 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 PARP11Q9NR21 331 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 GHRLQ9UBU3 117 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 PFDN2Q9UHV9 154 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 RNF150Q9ULK6 438 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 FOXA2Q9Y261 457 aaPredicted RBP6.68□□□□□ -1.34
VRK1-206ENST00000557222 NUBP2Q9Y5Y2 271 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 PEX16Q9Y5Y5 336 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 TNCP24821 2201 aa6.68□□□□□ -1.34
VRK1-206ENST00000557222 LOC100130705A0A1B0GUX0 176 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 HSPA12AO43301 675 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 RBBP9O75884 186 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 HSPB1P04792 205 aaKnown RBP6.67□□□□□ -1.34
VRK1-206ENST00000557222 RCC1P18754 421 aaPredicted RBP6.67□□□□□ -1.34
VRK1-206ENST00000557222 CD40LGP29965 261 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 BLVRBP30043 206 aaPredicted RBP6.67□□□□□ -1.34
VRK1-206ENST00000557222 MC5RP33032 325 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 VEGFCP49767 419 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 GABPB1Q06547 395 aaPredicted RBP6.67□□□□□ -1.34
VRK1-206ENST00000557222 MED21Q13503 144 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 Q499Y3 187 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 AKIRIN2Q53H80 203 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 DMKNQ6E0U4 476 aaPredicted RBP6.67□□□□□ -1.34
VRK1-206ENST00000557222 GLIPR1L1Q6UWM5 242 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 CBR4Q8N4T8 237 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 NUDT10Q8NFP7 164 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 PYDC1Q8WXC3 89 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 THRSPQ92748 146 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 GHSRQ92847 366 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 GALMQ96C23 342 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 NUDT11Q96G61 164 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 C8orf49Q96NF6 230 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 OR4C12Q96R67 309 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 C9orf16Q9BUW7 83 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 ELOVL1Q9BW60 279 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 MRPL20Q9BYC9 149 aaKnown RBP6.67□□□□□ -1.34
VRK1-206ENST00000557222 SLA2Q9H6Q3 261 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 PIPOXQ9P0Z9 390 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 AASSQ9UDR5 926 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 STUB1Q9UNE7 303 aa6.67□□□□□ -1.34
VRK1-206ENST00000557222 EXOSC1Q9Y3B2 195 aaKnown RBP6.67□□□□□ -1.34
VRK1-206ENST00000557222 TRBV5-7A0A0A0MS05 114 aa6.66□□□□□ -1.34
VRK1-206ENST00000557222 A0A1W2PP11 408 aa6.66□□□□□ -1.34
VRK1-206ENST00000557222 OR5H14A6NHG9 310 aa6.66□□□□□ -1.34
VRK1-206ENST00000557222 H3BNX3 289 aa6.66□□□□□ -1.34
VRK1-206ENST00000557222 ITGB1BP1O14713 200 aa6.66□□□□□ -1.34
VRK1-206ENST00000557222 RRHO14718 337 aa6.66□□□□□ -1.34
VRK1-206ENST00000557222 PDCD6O75340 191 aa6.66□□□□□ -1.34
VRK1-206ENST00000557222 MGMTP16455 207 aa6.66□□□□□ -1.34
VRK1-206ENST00000557222 ETV1P50549 477 aa6.66□□□□□ -1.34
VRK1-206ENST00000557222 CX3CL1P78423 397 aa6.66□□□□□ -1.34
VRK1-206ENST00000557222 ADARB1P78563 741 aaKnown RBP6.66□□□□□ -1.34
VRK1-206ENST00000557222 PITPNAQ00169 270 aa6.66□□□□□ -1.34
VRK1-206ENST00000557222 MOGAT2Q3SYC2 334 aa6.66□□□□□ -1.34
VRK1-206ENST00000557222 XAF1Q6GPH4 301 aa6.66□□□□□ -1.34
VRK1-206ENST00000557222 ZNF562Q6V9R5 426 aa6.66□□□□□ -1.34
VRK1-206ENST00000557222 OVCH2Q7RTZ1 564 aa6.66□□□□□ -1.34
VRK1-206ENST00000557222 PRR18Q8N4B5 295 aa6.66□□□□□ -1.34
VRK1-206ENST00000557222 OR2AK2Q8NG84 335 aa6.66□□□□□ -1.34
VRK1-206ENST00000557222 APH1BQ8WW43 257 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms