RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 GTF2F2P13984 249 aa7.77□□□□□ -1.17
SCFD1-220ENST00000556486 IGFBP3P17936 291 aaPredicted RBP7.77□□□□□ -1.17
SCFD1-220ENST00000556486 DCKP27707 260 aa7.77□□□□□ -1.17
SCFD1-220ENST00000556486 SOX6P35712 828 aa7.77□□□□□ -1.17
SCFD1-220ENST00000556486 REG1BP48304 166 aa7.77□□□□□ -1.17
SCFD1-220ENST00000556486 INSL3P51460 131 aa7.77□□□□□ -1.17
SCFD1-220ENST00000556486 GTF2A1P52655 376 aaPredicted RBP7.77□□□□□ -1.17
SCFD1-220ENST00000556486 PPP3R1P63098 170 aa7.77□□□□□ -1.17
SCFD1-220ENST00000556486 RUNX1Q01196 453 aa7.77□□□□□ -1.17
SCFD1-220ENST00000556486 GPR176Q14439 515 aa7.77□□□□□ -1.17
SCFD1-220ENST00000556486 LTC4SQ16873 150 aa7.77□□□□□ -1.17
SCFD1-220ENST00000556486 DDI2Q5TDH0 399 aa7.77□□□□□ -1.17
SCFD1-220ENST00000556486 XAF1Q6GPH4 301 aa7.77□□□□□ -1.17
SCFD1-220ENST00000556486 ZNF554Q86TJ5 538 aa7.77□□□□□ -1.17
SCFD1-220ENST00000556486 SATL1Q86VE3 508 aa7.77□□□□□ -1.17
SCFD1-220ENST00000556486 APH1BQ8WW43 257 aa7.77□□□□□ -1.17
SCFD1-220ENST00000556486 ISOC1Q96CN7 298 aa7.77□□□□□ -1.17
SCFD1-220ENST00000556486 SMIM19Q96E16 107 aa7.77□□□□□ -1.17
SCFD1-220ENST00000556486 RBMXL1Q96E39 390 aaKnown RBP7.77□□□□□ -1.17
SCFD1-220ENST00000556486 FAM192AQ9GZU8 254 aa7.77□□□□□ -1.17
SCFD1-220ENST00000556486 AMBNQ9NP70 447 aa7.77□□□□□ -1.17
SCFD1-220ENST00000556486 IGHV3-72A0A0B4J1Y9 119 aa7.76□□□□□ -1.17
SCFD1-220ENST00000556486 TRBV5-5A0A0J9YX44 114 aa7.76□□□□□ -1.17
SCFD1-220ENST00000556486 LOC100130705A0A1B0GUX0 176 aa7.76□□□□□ -1.17
SCFD1-220ENST00000556486 FAM90A10PA6NDY2 464 aa7.76□□□□□ -1.17
SCFD1-220ENST00000556486 TRIM64CA6NLI5 447 aa7.76□□□□□ -1.17
SCFD1-220ENST00000556486 C12orf77C9JDV5 145 aa7.76□□□□□ -1.17
SCFD1-220ENST00000556486 OGG1O15527 345 aa7.76□□□□□ -1.17
SCFD1-220ENST00000556486 LANCL1O43813 399 aa7.76□□□□□ -1.17
SCFD1-220ENST00000556486 GLAP06280 429 aa7.76□□□□□ -1.17
SCFD1-220ENST00000556486 BDKRB2P30411 391 aa7.76□□□□□ -1.17
SCFD1-220ENST00000556486 SOX2P48431 317 aa7.76□□□□□ -1.17
SCFD1-220ENST00000556486 FAM53AQ6NSI3 398 aaPredicted RBP7.76□□□□□ -1.17
SCFD1-220ENST00000556486 TRAT1Q6PIZ9 186 aa7.76□□□□□ -1.17
SCFD1-220ENST00000556486 CDH26Q8IXH8 852 aa7.76□□□□□ -1.17
SCFD1-220ENST00000556486 UBE2E2Q96LR5 201 aa7.76□□□□□ -1.17
SCFD1-220ENST00000556486 RASL11BQ9BPW5 248 aa7.76□□□□□ -1.17
SCFD1-220ENST00000556486 HSPB9Q9BQS6 159 aa7.76□□□□□ -1.17
SCFD1-220ENST00000556486 C9orf16Q9BUW7 83 aa7.76□□□□□ -1.17
SCFD1-220ENST00000556486 CHCHD3Q9NX63 227 aaKnown RBP7.76□□□□□ -1.17
SCFD1-220ENST00000556486 SORL1Q92673 2214 aa7.76□□□□□ -1.17
SCFD1-220ENST00000556486 ZNF736B4DX44 427 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-220ENST00000556486 TEX22C9J3V5 150 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 I3L521 148 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 AIPO00170 330 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 SPINT2O43291 252 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 WBP4O75554 376 aaKnown RBP7.75□□□□□ -1.17
SCFD1-220ENST00000556486 SERPINA2P20848 420 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 VDAC1P21796 283 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 F2RL1P55085 397 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 RPS11P62280 158 aaKnown RBP eCLIP7.75□□□□□ -1.17
SCFD1-220ENST00000556486 RIPK1Q13546 671 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 KIAA0141Q14154 515 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-220ENST00000556486 SRSF7Q16629 238 aaKnown RBP eCLIP7.75□□□□□ -1.17
SCFD1-220ENST00000556486 SLC22A6Q4U2R8 563 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 CT45A1Q5HYN5 189 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 LY6G6FQ5SQ64 297 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 C6orf183Q5T699 404 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 DMKNQ6E0U4 476 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-220ENST00000556486 ACSM6Q6P461 480 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 TMPRSS11AQ6ZMR5 421 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 LYPD6Q86Y78 171 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 C10orf67Q8IYJ2 551 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 STX19Q8N4C7 294 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 ZNF485Q8NCK3 441 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 CT45A3Q8NHU0 189 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 KCTD7Q96MP8 289 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 RDH12Q96NR8 316 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 OR5B12Q96R08 314 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 S100A13Q99584 98 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 ZNF184Q99676 751 aaPredicted RBP7.75□□□□□ -1.17
SCFD1-220ENST00000556486 CTDSP1Q9GZU7 261 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 EDA2RQ9HAV5 297 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 BABAM2Q9NXR7 383 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 ING4Q9UNL4 249 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 ALMS1Q8TCU4 4167 aa7.75□□□□□ -1.17
SCFD1-220ENST00000556486 A0A1W2PP11 408 aa7.74□□□□□ -1.17
SCFD1-220ENST00000556486 IRGMA1A4Y4 181 aa7.74□□□□□ -1.17
SCFD1-220ENST00000556486 MCRIP1C9JLW8 97 aa7.74□□□□□ -1.17
SCFD1-220ENST00000556486 SLC31A2O15432 143 aa7.74□□□□□ -1.17
SCFD1-220ENST00000556486 JTBO76095 146 aa7.74□□□□□ -1.17
SCFD1-220ENST00000556486 HLA-DRB1P01911 266 aa7.74□□□□□ -1.17
SCFD1-220ENST00000556486 HBZP02008 142 aa7.74□□□□□ -1.17
SCFD1-220ENST00000556486 OR8U8P0C7N1 319 aa7.74□□□□□ -1.17
SCFD1-220ENST00000556486 SPNP16150 400 aa7.74□□□□□ -1.17
SCFD1-220ENST00000556486 ETV1P50549 477 aa7.74□□□□□ -1.17
SCFD1-220ENST00000556486 SLURP1P55000 103 aa7.74□□□□□ -1.17
SCFD1-220ENST00000556486 Q499Y3 187 aa7.74□□□□□ -1.17
SCFD1-220ENST00000556486 YIF1BQ5BJH7 314 aa7.74□□□□□ -1.17
SCFD1-220ENST00000556486 ATAD3CQ5T2N8 411 aa7.74□□□□□ -1.17
SCFD1-220ENST00000556486 SYT6Q5T7P8 510 aaPredicted RBP7.74□□□□□ -1.17
SCFD1-220ENST00000556486 ASPHD1Q5U4P2 390 aa7.74□□□□□ -1.17
SCFD1-220ENST00000556486 GHSRQ92847 366 aa7.74□□□□□ -1.17
SCFD1-220ENST00000556486 PGLYRP3Q96LB9 341 aa7.74□□□□□ -1.17
SCFD1-220ENST00000556486 SLC29A1Q99808 456 aa7.74□□□□□ -1.17
SCFD1-220ENST00000556486 GNG12Q9UBI6 72 aa7.74□□□□□ -1.17
SCFD1-220ENST00000556486 CKLFQ9UBR5 152 aa7.74□□□□□ -1.17
SCFD1-220ENST00000556486 ZNF107Q9UII5 783 aaPredicted RBP7.74□□□□□ -1.17
SCFD1-220ENST00000556486 DIMT1Q9UNQ2 313 aaKnown RBP7.74□□□□□ -1.17
SCFD1-220ENST00000556486 TRAV8-7A0A075B6U6 113 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms