RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 SRSF7Q16629 238 aaKnown RBP eCLIP13.08□□□□□ -0.32
XRCC3-215ENST00000555964 SMN1Q16637 294 aaKnown RBP13.08□□□□□ -0.32
XRCC3-215ENST00000555964 C19orf54Q5BKX5 351 aa13.08□□□□□ -0.32
XRCC3-215ENST00000555964 CD200R1LQ6Q8B3 271 aa13.08□□□□□ -0.32
XRCC3-215ENST00000555964 FAM131AQ6UXB0 335 aa13.08□□□□□ -0.32
XRCC3-215ENST00000555964 TMEM80Q96HE8 168 aa13.08□□□□□ -0.32
XRCC3-215ENST00000555964 RITA1Q96K30 269 aa13.08□□□□□ -0.32
XRCC3-215ENST00000555964 PGLYRP3Q96LB9 341 aa13.08□□□□□ -0.32
XRCC3-215ENST00000555964 RNF5Q99942 180 aa13.08□□□□□ -0.32
XRCC3-215ENST00000555964 TM2D3Q9BRN9 247 aa13.08□□□□□ -0.32
XRCC3-215ENST00000555964 IFI27L2Q9H2X8 130 aa13.08□□□□□ -0.32
XRCC3-215ENST00000555964 A3GALT2U3KPV4 340 aa13.08□□□□□ -0.32
XRCC3-215ENST00000555964 TRIM64CA6NLI5 447 aa13.07□□□□□ -0.32
XRCC3-215ENST00000555964 ZP3P21754 424 aa13.07□□□□□ -0.32
XRCC3-215ENST00000555964 TPPP2P59282 170 aa13.07□□□□□ -0.32
XRCC3-215ENST00000555964 RPS11P62280 158 aaKnown RBP eCLIP13.07□□□□□ -0.32
XRCC3-215ENST00000555964 HMGN3Q15651 99 aa13.07□□□□□ -0.32
XRCC3-215ENST00000555964 LRRC36Q1X8D7 754 aa13.07□□□□□ -0.32
XRCC3-215ENST00000555964 AKIRIN2Q53H80 203 aa13.07□□□□□ -0.32
XRCC3-215ENST00000555964 C6orf141Q5SZD1 244 aa13.07□□□□□ -0.32
XRCC3-215ENST00000555964 SIGIRRQ6IA17 410 aa13.07□□□□□ -0.32
XRCC3-215ENST00000555964 MOB1BQ7L9L4 216 aa13.07□□□□□ -0.32
XRCC3-215ENST00000555964 PPP1R27Q86WC6 154 aa13.07□□□□□ -0.32
XRCC3-215ENST00000555964 ANKRD13BQ86YJ7 626 aa13.07□□□□□ -0.32
XRCC3-215ENST00000555964 IL1F10Q8WWZ1 152 aa13.07□□□□□ -0.32
XRCC3-215ENST00000555964 RBMXL1Q96E39 390 aaKnown RBP13.07□□□□□ -0.32
XRCC3-215ENST00000555964 FBXL15Q9H469 300 aa13.07□□□□□ -0.32
XRCC3-215ENST00000555964 TPSG1Q9NRR2 321 aa13.07□□□□□ -0.32
XRCC3-215ENST00000555964 SMPD3Q9NY59 655 aaPredicted RBP13.07□□□□□ -0.32
XRCC3-215ENST00000555964 WASHC3Q9Y3C0 194 aa13.07□□□□□ -0.32
XRCC3-215ENST00000555964 A0A1W2PPK0 400 aa13.06□□□□□ -0.32
XRCC3-215ENST00000555964 A8MZ25 164 aa13.06□□□□□ -0.32
XRCC3-215ENST00000555964 H7C2Y5 167 aa13.06□□□□□ -0.32
XRCC3-215ENST00000555964 SOX15O60248 233 aa13.06□□□□□ -0.32
XRCC3-215ENST00000555964 LALBAP00709 142 aa13.06□□□□□ -0.32
XRCC3-215ENST00000555964 TFAP2AP05549 437 aa13.06□□□□□ -0.32
XRCC3-215ENST00000555964 UNQ5815/PRO19632Q6UWF5 114 aa13.06□□□□□ -0.32
XRCC3-215ENST00000555964 PQLC1Q8N2U9 271 aa13.06□□□□□ -0.32
XRCC3-215ENST00000555964 SETD9Q8NE22 299 aa13.06□□□□□ -0.32
XRCC3-215ENST00000555964 FAM46BQ96A09 425 aa13.06□□□□□ -0.32
XRCC3-215ENST00000555964 DERL3Q96Q80 235 aa13.06□□□□□ -0.32
XRCC3-215ENST00000555964 SLC23A1Q9UHI7 598 aa13.06□□□□□ -0.32
XRCC3-215ENST00000555964 CLEC2DQ9UHP7 191 aa13.06□□□□□ -0.32
XRCC3-215ENST00000555964 NUBP2Q9Y5Y2 271 aa13.06□□□□□ -0.32
XRCC3-215ENST00000555964 ITGB1BP1O14713 200 aa13.05□□□□□ -0.32
XRCC3-215ENST00000555964 SLC22A1O15245 554 aa13.05□□□□□ -0.32
XRCC3-215ENST00000555964 ST8SIA5O15466 376 aa13.05□□□□□ -0.32
XRCC3-215ENST00000555964 SPDEFO95238 335 aa13.05□□□□□ -0.32
XRCC3-215ENST00000555964 BAG2O95816 211 aa13.05□□□□□ -0.32
XRCC3-215ENST00000555964 IGHV4-30-4P0DP06 118 aa13.05□□□□□ -0.32
XRCC3-215ENST00000555964 MOGAT2Q3SYC2 334 aa13.05□□□□□ -0.32
XRCC3-215ENST00000555964 ZFP41Q8N8Y5 198 aa13.05□□□□□ -0.32
XRCC3-215ENST00000555964 EDARADDQ8WWZ3 215 aa13.05□□□□□ -0.32
XRCC3-215ENST00000555964 TSNAXQ99598 290 aaKnown RBP13.05□□□□□ -0.32
XRCC3-215ENST00000555964 RSRP1Q9BUV0 290 aa13.05□□□□□ -0.32
XRCC3-215ENST00000555964 RIMS4Q9H426 269 aaPredicted RBP13.05□□□□□ -0.32
XRCC3-215ENST00000555964 CHMP1AQ9HD42 196 aaPredicted RBP13.05□□□□□ -0.32
XRCC3-215ENST00000555964 FAM53CQ9NYF3 392 aa13.05□□□□□ -0.32
XRCC3-215ENST00000555964 FBXO7Q9Y3I1 522 aa13.05□□□□□ -0.32
XRCC3-215ENST00000555964 H0YJW9 148 aa13.04□□□□□ -0.32
XRCC3-215ENST00000555964 IGHV3-11P01762 117 aa13.04□□□□□ -0.32
XRCC3-215ENST00000555964 CD1AP06126 327 aa13.04□□□□□ -0.32
XRCC3-215ENST00000555964 ZNF562Q6V9R5 426 aa13.04□□□□□ -0.32
XRCC3-215ENST00000555964 SPATA25Q9BR10 227 aa13.04□□□□□ -0.32
XRCC3-215ENST00000555964 TMEM59Q9BXS4 323 aa13.04□□□□□ -0.32
XRCC3-215ENST00000555964 S100A14Q9HCY8 104 aa13.04□□□□□ -0.32
XRCC3-215ENST00000555964 RANGRFQ9HD47 186 aaPredicted RBP13.04□□□□□ -0.32
XRCC3-215ENST00000555964 CNOT2Q9NZN8 540 aaKnown RBP13.04□□□□□ -0.32
XRCC3-215ENST00000555964 MGAT4AQ9UM21 535 aa13.04□□□□□ -0.32
XRCC3-215ENST00000555964 A0A0G2JLM5 398 aa13.03□□□□□ -0.32
XRCC3-215ENST00000555964 H0Y980 276 aa13.03□□□□□ -0.32
XRCC3-215ENST00000555964 H3BUA1 57 aa13.03□□□□□ -0.32
XRCC3-215ENST00000555964 MYL12BO14950 172 aa13.03□□□□□ -0.32
XRCC3-215ENST00000555964 IGLV1-51P01701 117 aa13.03□□□□□ -0.32
XRCC3-215ENST00000555964 TRGV3P03979 118 aa13.03□□□□□ -0.32
XRCC3-215ENST00000555964 CT45A6P0DMU7 189 aa13.03□□□□□ -0.32
XRCC3-215ENST00000555964 CT45A5P0DMU8 189 aa13.03□□□□□ -0.32
XRCC3-215ENST00000555964 CT45A7P0DMV0 189 aa13.03□□□□□ -0.32
XRCC3-215ENST00000555964 VEGFCP49767 419 aa13.03□□□□□ -0.32
XRCC3-215ENST00000555964 TTC23Q5W5X9 447 aa13.03□□□□□ -0.32
XRCC3-215ENST00000555964 GLT8D1Q68CQ7 371 aa13.03□□□□□ -0.32
XRCC3-215ENST00000555964 ZFAND6Q6FIF0 208 aa13.03□□□□□ -0.32
XRCC3-215ENST00000555964 SVOPQ8N4V2 548 aa13.03□□□□□ -0.32
XRCC3-215ENST00000555964 OR5AN1Q8NGI8 311 aa13.03□□□□□ -0.32
XRCC3-215ENST00000555964 CASTOR1Q8WTX7 329 aa13.03□□□□□ -0.32
XRCC3-215ENST00000555964 RHOVQ96L33 236 aa13.03□□□□□ -0.32
XRCC3-215ENST00000555964 MS4A10Q96PG2 267 aa13.03□□□□□ -0.32
XRCC3-215ENST00000555964 SULT4A1Q9BR01 284 aa13.03□□□□□ -0.32
XRCC3-215ENST00000555964 METTL1Q9UBP6 276 aaKnown RBP13.03□□□□□ -0.32
XRCC3-215ENST00000555964 PNMA8CA0A1B0GUJ8 204 aa13.02□□□□□ -0.33
XRCC3-215ENST00000555964 C13orf42A0A1B0GVH6 325 aa13.02□□□□□ -0.33
XRCC3-215ENST00000555964 EFCAB10A6NFE3 127 aa13.02□□□□□ -0.33
XRCC3-215ENST00000555964 IFNA6P05013 189 aa13.02□□□□□ -0.33
XRCC3-215ENST00000555964 CPEP16870 476 aa13.02□□□□□ -0.33
XRCC3-215ENST00000555964 CELP19835 753 aa13.02□□□□□ -0.33
XRCC3-215ENST00000555964 RPL39P5Q59GN2 51 aa13.02□□□□□ -0.33
XRCC3-215ENST00000555964 ZNF485Q8NCK3 441 aa13.02□□□□□ -0.33
XRCC3-215ENST00000555964 LFNGQ8NES3 379 aa13.02□□□□□ -0.33
XRCC3-215ENST00000555964 KCNG3Q8TAE7 436 aa13.02□□□□□ -0.33
XRCC3-215ENST00000555964 SETD6Q8TBK2 473 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms