RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 DIABLOQ9NR28 239 aa9.65□□□□□ -0.86
SRP54-206ENST00000555317 SERTAD4Q9NUC0 356 aa9.65□□□□□ -0.86
SRP54-206ENST00000555317 ZNF230Q9UIE0 474 aaPredicted RBP9.65□□□□□ -0.86
SRP54-206ENST00000555317 ZNF221Q9UK13 617 aa9.65□□□□□ -0.86
SRP54-206ENST00000555317 A0A0A6YYH2 397 aa9.64□□□□□ -0.87
SRP54-206ENST00000555317 TMEM235A6NFC5 223 aa9.64□□□□□ -0.87
SRP54-206ENST00000555317 A6NJ64 397 aa9.64□□□□□ -0.87
SRP54-206ENST00000555317 SH2D7A6NKC9 451 aaPredicted RBP9.64□□□□□ -0.87
SRP54-206ENST00000555317 ITGB1BP1O14713 200 aa9.64□□□□□ -0.87
SRP54-206ENST00000555317 TGFBR1P36897 503 aa9.64□□□□□ -0.87
SRP54-206ENST00000555317 EBI3Q14213 229 aa9.64□□□□□ -0.87
SRP54-206ENST00000555317 PNLIPRP3Q17RR3 467 aa9.64□□□□□ -0.87
SRP54-206ENST00000555317 FBLN7Q53RD9 439 aa9.64□□□□□ -0.87
SRP54-206ENST00000555317 ZNF833PQ6ZTB9 187 aa9.64□□□□□ -0.87
SRP54-206ENST00000555317 CENPVQ7Z7K6 275 aaPredicted RBP9.64□□□□□ -0.87
SRP54-206ENST00000555317 C5orf56Q8N8D9 126 aa9.64□□□□□ -0.87
SRP54-206ENST00000555317 OR8H1Q8NGG4 311 aa9.64□□□□□ -0.87
SRP54-206ENST00000555317 OR5H6Q8NGV6 325 aa9.64□□□□□ -0.87
SRP54-206ENST00000555317 RASL11BQ9BPW5 248 aa9.64□□□□□ -0.87
SRP54-206ENST00000555317 IFI27L2Q9H2X8 130 aa9.64□□□□□ -0.87
SRP54-206ENST00000555317 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.64□□□□□ -0.87
SRP54-206ENST00000555317 RDH8Q9NYR8 311 aa9.64□□□□□ -0.87
SRP54-206ENST00000555317 SPATA2Q9UM82 520 aa9.64□□□□□ -0.87
SRP54-206ENST00000555317 RBM7Q9Y580 266 aaKnown RBP9.64□□□□□ -0.87
SRP54-206ENST00000555317 TRAV18A0A075B6X5 111 aa9.63□□□□□ -0.87
SRP54-206ENST00000555317 DIRAS3O95661 229 aa9.63□□□□□ -0.87
SRP54-206ENST00000555317 CSF1P09603 554 aa9.63□□□□□ -0.87
SRP54-206ENST00000555317 GSTT2P0CG29 244 aa9.63□□□□□ -0.87
SRP54-206ENST00000555317 GSTT2BP0CG30 244 aa9.63□□□□□ -0.87
SRP54-206ENST00000555317 SMIM18P0DKX4 95 aa9.63□□□□□ -0.87
SRP54-206ENST00000555317 RPS19P39019 145 aaKnown RBP9.63□□□□□ -0.87
SRP54-206ENST00000555317 VBP1P61758 197 aa9.63□□□□□ -0.87
SRP54-206ENST00000555317 MMDQ15546 238 aa9.63□□□□□ -0.87
SRP54-206ENST00000555317 SRSF7Q16629 238 aaKnown RBP eCLIP9.63□□□□□ -0.87
SRP54-206ENST00000555317 RPL39P5Q59GN2 51 aa9.63□□□□□ -0.87
SRP54-206ENST00000555317 UBE2NLQ5JXB2 153 aa9.63□□□□□ -0.87
SRP54-206ENST00000555317 TREML4Q6UXN2 200 aa9.63□□□□□ -0.87
SRP54-206ENST00000555317 Q6ZS46 218 aa9.63□□□□□ -0.87
SRP54-206ENST00000555317 GPR141Q7Z602 305 aa9.63□□□□□ -0.87
SRP54-206ENST00000555317 FOXRED2Q8IWF2 684 aa9.63□□□□□ -0.87
SRP54-206ENST00000555317 ODF3L1Q8IXM7 274 aa9.63□□□□□ -0.87
SRP54-206ENST00000555317 OR4X2Q8NGF9 303 aa9.63□□□□□ -0.87
SRP54-206ENST00000555317 NUDCD2Q8WVJ2 157 aa9.63□□□□□ -0.87
SRP54-206ENST00000555317 SLC25A38Q96DW6 304 aa9.63□□□□□ -0.87
SRP54-206ENST00000555317 S100A16Q96FQ6 103 aaKnown RBP9.63□□□□□ -0.87
SRP54-206ENST00000555317 ABHD14BQ96IU4 210 aa9.63□□□□□ -0.87
SRP54-206ENST00000555317 ZNF251Q9BRH9 671 aa9.63□□□□□ -0.87
SRP54-206ENST00000555317 CABLES2Q9BTV7 478 aa9.63□□□□□ -0.87
SRP54-206ENST00000555317 ST6GALNAC5Q9BVH7 336 aa9.63□□□□□ -0.87
SRP54-206ENST00000555317 PARP12Q9H0J9 701 aaKnown RBP9.63□□□□□ -0.87
SRP54-206ENST00000555317 C11orf54Q9H0W9 315 aaPredicted RBP9.63□□□□□ -0.87
SRP54-206ENST00000555317 DCSTAMPQ9H295 470 aa9.63□□□□□ -0.87
SRP54-206ENST00000555317 IGKV1-6A0A0C4DH72 117 aa9.62□□□□□ -0.87
SRP54-206ENST00000555317 OR5H14A6NHG9 310 aa9.62□□□□□ -0.87
SRP54-206ENST00000555317 ZNF736B4DX44 427 aaPredicted RBP9.62□□□□□ -0.87
SRP54-206ENST00000555317 H7C2Y5 167 aa9.62□□□□□ -0.87
SRP54-206ENST00000555317 KCNAB3O43448 404 aa9.62□□□□□ -0.87
SRP54-206ENST00000555317 AMY1AP04745 511 aa9.62□□□□□ -0.87
SRP54-206ENST00000555317 AMY2AP04746 511 aa9.62□□□□□ -0.87
SRP54-206ENST00000555317 CTXN2P0C2S0 81 aa9.62□□□□□ -0.87
SRP54-206ENST00000555317 NCS1P62166 190 aa9.62□□□□□ -0.87
SRP54-206ENST00000555317 IGSF11Q5DX21 431 aa9.62□□□□□ -0.87
SRP54-206ENST00000555317 Q6ZS49 121 aa9.62□□□□□ -0.87
SRP54-206ENST00000555317 SLC35E3Q7Z769 313 aa9.62□□□□□ -0.87
SRP54-206ENST00000555317 SAMD12Q8N8I0 201 aa9.62□□□□□ -0.87
SRP54-206ENST00000555317 OR5AU1Q8NGC0 362 aa9.62□□□□□ -0.87
SRP54-206ENST00000555317 SLC25A46Q96AG3 418 aa9.62□□□□□ -0.87
SRP54-206ENST00000555317 KCTD12Q96CX2 325 aaKnown RBP9.62□□□□□ -0.87
SRP54-206ENST00000555317 NABP2Q9BQ15 211 aa9.62□□□□□ -0.87
SRP54-206ENST00000555317 MMP27Q9H306 513 aa9.62□□□□□ -0.87
SRP54-206ENST00000555317 LIN7CQ9NUP9 197 aaKnown RBP9.62□□□□□ -0.87
SRP54-206ENST00000555317 KIAA1456Q9P272 454 aa9.62□□□□□ -0.87
SRP54-206ENST00000555317 RNF150Q9ULK6 438 aa9.62□□□□□ -0.87
SRP54-206ENST00000555317 NOTCH1P46531 2555 aa9.61□□□□□ -0.87
SRP54-206ENST00000555317 TRBV6-7A0A0A0MS04 114 aa9.61□□□□□ -0.87
SRP54-206ENST00000555317 APOA2P02652 100 aa9.61□□□□□ -0.87
SRP54-206ENST00000555317 OR8U9P0C7N5 309 aa9.61□□□□□ -0.87
SRP54-206ENST00000555317 CD28P10747 220 aa9.61□□□□□ -0.87
SRP54-206ENST00000555317 MC5RP33032 325 aa9.61□□□□□ -0.87
SRP54-206ENST00000555317 ARPC4P59998 168 aa9.61□□□□□ -0.87
SRP54-206ENST00000555317 ACTBP60709 375 aa9.61□□□□□ -0.87
SRP54-206ENST00000555317 SLC35B1P78383 322 aa9.61□□□□□ -0.87
SRP54-206ENST00000555317 CBX3Q13185 183 aa9.61□□□□□ -0.87
SRP54-206ENST00000555317 NSUN5P1Q3KNT7 163 aa9.61□□□□□ -0.87
SRP54-206ENST00000555317 ZNF260Q3ZCT1 412 aa9.61□□□□□ -0.87
SRP54-206ENST00000555317 KHDC1LQ5JSQ8 128 aa9.61□□□□□ -0.87
SRP54-206ENST00000555317 TMEM69Q5SWH9 247 aa9.61□□□□□ -0.87
SRP54-206ENST00000555317 FAM131AQ6UXB0 335 aa9.61□□□□□ -0.87
SRP54-206ENST00000555317 Q8N6K4 173 aa9.61□□□□□ -0.87
SRP54-206ENST00000555317 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.61□□□□□ -0.87
SRP54-206ENST00000555317 OR8U1Q8NH10 309 aa9.61□□□□□ -0.87
SRP54-206ENST00000555317 CHPT1Q8WUD6 406 aa9.61□□□□□ -0.87
SRP54-206ENST00000555317 AGMATQ9BSE5 352 aa9.61□□□□□ -0.87
SRP54-206ENST00000555317 WNT10AQ9GZT5 417 aa9.61□□□□□ -0.87
SRP54-206ENST00000555317 OR2D2Q9H210 308 aa9.61□□□□□ -0.87
SRP54-206ENST00000555317 ELF5Q9UKW6 265 aaPredicted RBP9.61□□□□□ -0.87
SRP54-206ENST00000555317 SMIM31A0A1B0GVY4 71 aa9.6□□□□□ -0.87
SRP54-206ENST00000555317 PSMB11A5LHX3 300 aa9.6□□□□□ -0.87
SRP54-206ENST00000555317 M0R1X1 148 aa9.6□□□□□ -0.87
SRP54-206ENST00000555317 AP4M1O00189 453 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms