RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 SPACA4Q8TDM5 124 aa0.97□□□□□ -2.25
SCFD1-214ENST00000554819 FGF13Q92913 245 aa0.97□□□□□ -2.25
SCFD1-214ENST00000554819 ABHD14BQ96IU4 210 aa0.97□□□□□ -2.25
SCFD1-214ENST00000554819 TRNT1Q96Q11 434 aaKnown RBP0.97□□□□□ -2.25
SCFD1-214ENST00000554819 HBEGFQ99075 208 aa0.97□□□□□ -2.25
SCFD1-214ENST00000554819 CYSTM1Q9H1C7 97 aa0.97□□□□□ -2.25
SCFD1-214ENST00000554819 DISP1Q96F81 1524 aa0.97□□□□□ -2.25
SCFD1-214ENST00000554819 KIAA0232Q92628 1395 aa0.96□□□□□ -2.26
SCFD1-214ENST00000554819 ZNF532Q9HCE3 1301 aa0.96□□□□□ -2.26
SCFD1-214ENST00000554819 CD7P09564 240 aa0.96□□□□□ -2.26
SCFD1-214ENST00000554819 OR1E2P47887 323 aa0.96□□□□□ -2.26
SCFD1-214ENST00000554819 RPL14P50914 215 aaKnown RBP0.96□□□□□ -2.26
SCFD1-214ENST00000554819 OR10A3P58181 314 aa0.96□□□□□ -2.26
SCFD1-214ENST00000554819 RAB31Q13636 194 aa0.96□□□□□ -2.26
SCFD1-214ENST00000554819 TMEM249Q2WGJ8 235 aa0.96□□□□□ -2.26
SCFD1-214ENST00000554819 LHFPL1Q86WI0 220 aa0.96□□□□□ -2.26
SCFD1-214ENST00000554819 TMEM75Q8N9X5 138 aa0.96□□□□□ -2.26
SCFD1-214ENST00000554819 CCDC112Q8NEF3 446 aa0.96□□□□□ -2.26
SCFD1-214ENST00000554819 C10orf105Q8TEF2 133 aa0.96□□□□□ -2.26
SCFD1-214ENST00000554819 CCDC124Q96CT7 223 aaKnown RBP0.96□□□□□ -2.26
SCFD1-214ENST00000554819 RETNLBQ9BQ08 111 aa0.96□□□□□ -2.26
SCFD1-214ENST00000554819 MED28Q9H204 178 aa0.96□□□□□ -2.26
SCFD1-214ENST00000554819 FAM215AQ9Y5M1 114 aa0.96□□□□□ -2.26
SCFD1-214ENST00000554819 SLC17A3O00476 420 aa0.95□□□□□ -2.26
SCFD1-214ENST00000554819 ZW10O43264 779 aa0.95□□□□□ -2.26
SCFD1-214ENST00000554819 SGCEO43556 437 aa0.95□□□□□ -2.26
SCFD1-214ENST00000554819 PSMG1O95456 288 aa0.95□□□□□ -2.26
SCFD1-214ENST00000554819 ZNF705DP0CH99 300 aaPredicted RBP0.95□□□□□ -2.26
SCFD1-214ENST00000554819 ZNF705BP0CI00 300 aaPredicted RBP0.95□□□□□ -2.26
SCFD1-214ENST00000554819 CCL2P13500 99 aa0.95□□□□□ -2.26
SCFD1-214ENST00000554819 TAS2R45P59539 299 aa0.95□□□□□ -2.26
SCFD1-214ENST00000554819 FAM3AP98173 230 aa0.95□□□□□ -2.26
SCFD1-214ENST00000554819 EXOC3L4Q17RC7 722 aa0.95□□□□□ -2.26
SCFD1-214ENST00000554819 OR5J2Q8NH18 312 aa0.95□□□□□ -2.26
SCFD1-214ENST00000554819 CCDC127Q96BQ5 260 aa0.95□□□□□ -2.26
SCFD1-214ENST00000554819 ACBD6Q9BR61 282 aa0.95□□□□□ -2.26
SCFD1-214ENST00000554819 UBQLN4Q9NRR5 601 aa0.95□□□□□ -2.26
SCFD1-214ENST00000554819 MRM2Q9UI43 246 aaKnown RBP0.95□□□□□ -2.26
SCFD1-214ENST00000554819 SNX10Q9Y5X0 201 aa0.95□□□□□ -2.26
SCFD1-214ENST00000554819 TRAV41A0A0B4J266 112 aa0.94□□□□□ -2.26
SCFD1-214ENST00000554819 OR5K4A6NMS3 321 aa0.94□□□□□ -2.26
SCFD1-214ENST00000554819 LIN7AO14910 233 aaPredicted RBP0.94□□□□□ -2.26
SCFD1-214ENST00000554819 FADS2O95864 444 aaKnown RBP0.94□□□□□ -2.26
SCFD1-214ENST00000554819 IGLV3-27P01718 113 aa0.94□□□□□ -2.26
SCFD1-214ENST00000554819 UCHL1P09936 223 aa0.94□□□□□ -2.26
SCFD1-214ENST00000554819 ZNF728P0DKX0 622 aa0.94□□□□□ -2.26
SCFD1-214ENST00000554819 CCL3P10147 92 aa0.94□□□□□ -2.26
SCFD1-214ENST00000554819 G6PCP35575 357 aa0.94□□□□□ -2.26
SCFD1-214ENST00000554819 XCL1P47992 114 aa0.94□□□□□ -2.26
SCFD1-214ENST00000554819 TBC1D28Q2M2D7 210 aa0.94□□□□□ -2.26
SCFD1-214ENST00000554819 SLC35E3Q7Z769 313 aa0.94□□□□□ -2.26
SCFD1-214ENST00000554819 NATD1Q8N6N6 113 aa0.94□□□□□ -2.26
SCFD1-214ENST00000554819 OR8B12Q8NGG6 310 aa0.94□□□□□ -2.26
SCFD1-214ENST00000554819 CCDC12Q8WUD4 166 aaPredicted RBP0.94□□□□□ -2.26
SCFD1-214ENST00000554819 RORBQ92753 470 aa0.94□□□□□ -2.26
SCFD1-214ENST00000554819 NUP153P49790 1475 aaKnown RBP0.93□□□□□ -2.26
SCFD1-214ENST00000554819 A8MUN3 132 aa0.93□□□□□ -2.26
SCFD1-214ENST00000554819 OR11H12B2RN74 326 aa0.93□□□□□ -2.26
SCFD1-214ENST00000554819 LIMS3P0CW19 117 aa0.93□□□□□ -2.26
SCFD1-214ENST00000554819 LIMS4P0CW20 117 aa0.93□□□□□ -2.26
SCFD1-214ENST00000554819 IDH3GP51553 393 aaPredicted RBP0.93□□□□□ -2.26
SCFD1-214ENST00000554819 OR4D1Q15615 310 aa0.93□□□□□ -2.26
SCFD1-214ENST00000554819 PLCZ1Q86YW0 608 aa0.93□□□□□ -2.26
SCFD1-214ENST00000554819 OR11H2Q8NH07 326 aa0.93□□□□□ -2.26
SCFD1-214ENST00000554819 C8orf4Q9NR00 106 aa0.93□□□□□ -2.26
SCFD1-214ENST00000554819 GLS2Q9UI32 602 aa0.93□□□□□ -2.26
SCFD1-214ENST00000554819 SOX21Q9Y651 276 aaPredicted RBP0.93□□□□□ -2.26
SCFD1-214ENST00000554819 CLUHO75153 1309 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 IGKV2-40A0A087WW87 121 aaPredicted RBP0.92□□□□□ -2.26
SCFD1-214ENST00000554819 TMSB15BA0A087X1C1 80 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 TRGV5A0A0B4J1U4 118 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 RFPL4AA6NLU0 287 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 RFPL4AL1F8VTS6 287 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 SULT1C2O00338 296 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 IGKV2D-40P01614 121 aaPredicted RBP0.92□□□□□ -2.26
SCFD1-214ENST00000554819 IGHV1-69P01742 117 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 APOA1P02647 267 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 IVLP07476 585 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 OR13C7P0DN81 318 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 CD24P25063 80 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 CRYBB3P26998 211 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 KCNJ3P48549 501 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 SERPINB10P48595 397 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 CTBP2P56545 445 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 GLO1Q04760 184 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 STX3Q13277 289 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 C1DQ13901 141 aaKnown RBP0.92□□□□□ -2.26
SCFD1-214ENST00000554819 FBXO48Q5FWF7 155 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 AMTNQ6UX39 209 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 SCGB1D4Q6XE38 83 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 LRRC28Q86X40 367 aaPredicted RBP0.92□□□□□ -2.26
SCFD1-214ENST00000554819 SLC13A5Q86YT5 568 aaPredicted RBP0.92□□□□□ -2.26
SCFD1-214ENST00000554819 CNEP1R1Q8N9A8 125 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 OR2D3Q8NGH3 330 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 TNFAIP8L1Q8WVP5 186 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 ACY3Q96HD9 319 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 SLC35G5Q96KT7 338 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 SERPINB11Q96P15 392 aa0.92□□□□□ -2.26
SCFD1-214ENST00000554819 NKX6-2Q9C056 277 aaPredicted RBP0.92□□□□□ -2.26
SCFD1-214ENST00000554819 EIF5A2Q9GZV4 153 aaKnown RBP0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms