RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 PHF21AQ96BD5 680 aa6.91□□□□□ -1.3
ACTN1-213ENST00000554508 ISOC1Q96CN7 298 aa6.91□□□□□ -1.3
ACTN1-213ENST00000554508 BCL7BQ9BQE9 202 aa6.91□□□□□ -1.3
ACTN1-213ENST00000554508 SULT4A1Q9BR01 284 aa6.91□□□□□ -1.3
ACTN1-213ENST00000554508 GON7Q9BXV9 100 aa6.91□□□□□ -1.3
ACTN1-213ENST00000554508 ZFP57Q9NU63 452 aa6.91□□□□□ -1.3
ACTN1-213ENST00000554508 LIN7CQ9NUP9 197 aaKnown RBP6.91□□□□□ -1.3
ACTN1-213ENST00000554508 PLEKHJ1Q9NW61 149 aa6.91□□□□□ -1.3
ACTN1-213ENST00000554508 ABRACLQ9P1F3 81 aa6.91□□□□□ -1.3
ACTN1-213ENST00000554508 ETV7Q9Y603 341 aa6.91□□□□□ -1.3
ACTN1-213ENST00000554508 CEPT1Q9Y6K0 416 aa6.91□□□□□ -1.3
ACTN1-213ENST00000554508 A0A075B6Q4 140 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 TRBV6-6A0A0A6YYG2 114 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 IGHV3-72A0A0B4J1Y9 119 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 A0A1W2PRX2 142 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 TMEM127O75204 238 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 NAPSAO96009 420 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 CD33P20138 364 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 SLC6A1P30531 599 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 SOX6P35712 828 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 PPP1CCP36873 323 aaKnown RBP6.9□□□□□ -1.3
ACTN1-213ENST00000554508 SCAND1P57086 179 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 HMGN3Q15651 99 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 REC114Q7Z4M0 266 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 SAMD12Q8N8I0 201 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 OR2AK2Q8NG84 335 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 OR52L2PQ8NGH6 319 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 OR5H6Q8NGV6 325 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 OR10R2Q8NGX6 335 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 AP3S1Q92572 193 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 RAB3CQ96E17 227 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 S1PR3Q99500 378 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 RASL11BQ9BPW5 248 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 ABHD14AQ9BUJ0 271 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 ABCG5Q9H222 651 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 GHITMQ9H3K2 345 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 CHMP1AQ9HD42 196 aaPredicted RBP6.9□□□□□ -1.3
ACTN1-213ENST00000554508 PLSCR3Q9NRY6 295 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 COMMD3Q9UBI1 195 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 RSL24D1Q9UHA3 163 aaKnown RBP6.9□□□□□ -1.3
ACTN1-213ENST00000554508 HSF4Q9ULV5 492 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 MGAT4AQ9UM21 535 aa6.9□□□□□ -1.3
ACTN1-213ENST00000554508 TGP01266 2768 aa6.89□□□□□ -1.31
ACTN1-213ENST00000554508 AP4M1O00189 453 aa6.89□□□□□ -1.31
ACTN1-213ENST00000554508 PF4P02776 101 aa6.89□□□□□ -1.31
ACTN1-213ENST00000554508 ZNF182P17025 639 aaPredicted RBP6.89□□□□□ -1.31
ACTN1-213ENST00000554508 MRPS15P82914 257 aaKnown RBP6.89□□□□□ -1.31
ACTN1-213ENST00000554508 LSAMPQ13449 338 aa6.89□□□□□ -1.31
ACTN1-213ENST00000554508 GNMTQ14749 295 aa6.89□□□□□ -1.31
ACTN1-213ENST00000554508 MOGAT2Q3SYC2 334 aa6.89□□□□□ -1.31
ACTN1-213ENST00000554508 KHDC1LQ5JSQ8 128 aa6.89□□□□□ -1.31
ACTN1-213ENST00000554508 UBE2NLQ5JXB2 153 aa6.89□□□□□ -1.31
ACTN1-213ENST00000554508 FAM71F2Q6NXP2 309 aa6.89□□□□□ -1.31
ACTN1-213ENST00000554508 MZT2AQ6P582 158 aa6.89□□□□□ -1.31
ACTN1-213ENST00000554508 C10orf99Q6UWK7 81 aa6.89□□□□□ -1.31
ACTN1-213ENST00000554508 ZNF833PQ6ZTB9 187 aa6.89□□□□□ -1.31
ACTN1-213ENST00000554508 ZNF329Q86UD4 541 aa6.89□□□□□ -1.31
ACTN1-213ENST00000554508 ODF3L1Q8IXM7 274 aa6.89□□□□□ -1.31
ACTN1-213ENST00000554508 STPG2Q8N412 459 aa6.89□□□□□ -1.31
ACTN1-213ENST00000554508 Q8N9W7 124 aa6.89□□□□□ -1.31
ACTN1-213ENST00000554508 SETD6Q8TBK2 473 aa6.89□□□□□ -1.31
ACTN1-213ENST00000554508 ACOT12Q8WYK0 555 aa6.89□□□□□ -1.31
ACTN1-213ENST00000554508 KCTD12Q96CX2 325 aaKnown RBP6.89□□□□□ -1.31
ACTN1-213ENST00000554508 ARHGAP5-AS1Q96IT6 56 aa6.89□□□□□ -1.31
ACTN1-213ENST00000554508 CYYR1Q96J86 154 aa6.89□□□□□ -1.31
ACTN1-213ENST00000554508 NOL4LQ96MY1 436 aaPredicted RBP6.89□□□□□ -1.31
ACTN1-213ENST00000554508 PECRQ9BY49 303 aa6.89□□□□□ -1.31
ACTN1-213ENST00000554508 RBM38Q9H0Z9 239 aaKnown RBP6.89□□□□□ -1.31
ACTN1-213ENST00000554508 RHBDL2Q9NX52 303 aa6.89□□□□□ -1.31
ACTN1-213ENST00000554508 PIPOXQ9P0Z9 390 aa6.89□□□□□ -1.31
ACTN1-213ENST00000554508 SPATA2Q9UM82 520 aa6.89□□□□□ -1.31
ACTN1-213ENST00000554508 SMIM31A0A1B0GVY4 71 aa6.88□□□□□ -1.31
ACTN1-213ENST00000554508 DPPA5A6NC42 116 aa6.88□□□□□ -1.31
ACTN1-213ENST00000554508 FOXI3A8MTJ6 420 aaPredicted RBP6.88□□□□□ -1.31
ACTN1-213ENST00000554508 ZNF736B4DX44 427 aaPredicted RBP6.88□□□□□ -1.31
ACTN1-213ENST00000554508 RAB27BO00194 218 aa6.88□□□□□ -1.31
ACTN1-213ENST00000554508 ITGB1BP1O14713 200 aa6.88□□□□□ -1.31
ACTN1-213ENST00000554508 SCGNO76038 276 aa6.88□□□□□ -1.31
ACTN1-213ENST00000554508 DUS4LO95620 317 aaKnown RBP6.88□□□□□ -1.31
ACTN1-213ENST00000554508 GNB3P16520 340 aa6.88□□□□□ -1.31
ACTN1-213ENST00000554508 GPR12P47775 334 aa6.88□□□□□ -1.31
ACTN1-213ENST00000554508 TMEM50BP56557 158 aa6.88□□□□□ -1.31
ACTN1-213ENST00000554508 RPL23AP62750 156 aaKnown RBP6.88□□□□□ -1.31
ACTN1-213ENST00000554508 PNLIPRP3Q17RR3 467 aa6.88□□□□□ -1.31
ACTN1-213ENST00000554508 OXLD1Q5BKU9 147 aa6.88□□□□□ -1.31
ACTN1-213ENST00000554508 PLAC9Q5JTB6 97 aa6.88□□□□□ -1.31
ACTN1-213ENST00000554508 TEX38Q6PEX7 206 aa6.88□□□□□ -1.31
ACTN1-213ENST00000554508 C5orf24Q7Z6I8 188 aa6.88□□□□□ -1.31
ACTN1-213ENST00000554508 FAM71E2Q8N5Q1 922 aa6.88□□□□□ -1.31
ACTN1-213ENST00000554508 DYNC2LI1Q8TCX1 351 aa6.88□□□□□ -1.31
ACTN1-213ENST00000554508 IL1F10Q8WWZ1 152 aa6.88□□□□□ -1.31
ACTN1-213ENST00000554508 EDARADDQ8WWZ3 215 aa6.88□□□□□ -1.31
ACTN1-213ENST00000554508 SLC25A38Q96DW6 304 aa6.88□□□□□ -1.31
ACTN1-213ENST00000554508 S100A16Q96FQ6 103 aaKnown RBP6.88□□□□□ -1.31
ACTN1-213ENST00000554508 RCC1LQ96I51 464 aaKnown RBP6.88□□□□□ -1.31
ACTN1-213ENST00000554508 NABP2Q9BQ15 211 aa6.88□□□□□ -1.31
ACTN1-213ENST00000554508 DIABLOQ9NR28 239 aa6.88□□□□□ -1.31
ACTN1-213ENST00000554508 BATF3Q9NR55 127 aa6.88□□□□□ -1.31
ACTN1-213ENST00000554508 NDUFA13Q9P0J0 144 aa6.88□□□□□ -1.31
ACTN1-213ENST00000554508 AK3Q9UIJ7 227 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms