RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 DERL1Q9BUN8 251 aa3.73□□□□□ -1.81
ATXN3-227ENST00000554491 EFCAB11Q9BUY7 163 aa3.73□□□□□ -1.81
ATXN3-227ENST00000554491 VAMP8Q9BV40 100 aa3.73□□□□□ -1.81
ATXN3-227ENST00000554491 GATA5Q9BWX5 397 aaPredicted RBP3.73□□□□□ -1.81
ATXN3-227ENST00000554491 ZNF471Q9BX82 626 aaPredicted RBP3.73□□□□□ -1.81
ATXN3-227ENST00000554491 PECRQ9BY49 303 aa3.73□□□□□ -1.81
ATXN3-227ENST00000554491 OR11A1Q9GZK7 315 aa3.73□□□□□ -1.81
ATXN3-227ENST00000554491 CXCL16Q9H2A7 254 aa3.73□□□□□ -1.81
ATXN3-227ENST00000554491 PPDPFQ9H3Y8 114 aa3.73□□□□□ -1.81
ATXN3-227ENST00000554491 MAGIXQ9H6Y5 334 aa3.73□□□□□ -1.81
ATXN3-227ENST00000554491 CDH20Q9HBT6 801 aa3.73□□□□□ -1.81
ATXN3-227ENST00000554491 MEPEQ9NQ76 525 aaPredicted RBP3.73□□□□□ -1.81
ATXN3-227ENST00000554491 HINT3Q9NQE9 182 aaKnown RBP3.73□□□□□ -1.81
ATXN3-227ENST00000554491 PARP11Q9NR21 331 aa3.73□□□□□ -1.81
ATXN3-227ENST00000554491 TMEM242Q9NWH2 141 aa3.73□□□□□ -1.81
ATXN3-227ENST00000554491 ARL15Q9NXU5 204 aa3.73□□□□□ -1.81
ATXN3-227ENST00000554491 TAS2R16Q9NYV7 291 aa3.73□□□□□ -1.81
ATXN3-227ENST00000554491 DNAJC27Q9NZQ0 273 aa3.73□□□□□ -1.81
ATXN3-227ENST00000554491 DAPP1Q9UN19 280 aa3.73□□□□□ -1.81
ATXN3-227ENST00000554491 HS3ST2Q9Y278 367 aa3.73□□□□□ -1.81
ATXN3-227ENST00000554491 BTRCQ9Y297 605 aa3.73□□□□□ -1.81
ATXN3-227ENST00000554491 MRPS28Q9Y2Q9 187 aaKnown RBP3.73□□□□□ -1.81
ATXN3-227ENST00000554491 SIRT4Q9Y6E7 314 aaPredicted RBP3.73□□□□□ -1.81
ATXN3-227ENST00000554491 WSB1Q9Y6I7 421 aa3.73□□□□□ -1.81
ATXN3-227ENST00000554491 ADGRG4Q8IZF6 3080 aa3.73□□□□□ -1.81
ATXN3-227ENST00000554491 NUMA1Q14980 2115 aa3.73□□□□□ -1.81
ATXN3-227ENST00000554491 TRBV24-1A0A075B6N3 115 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 A0A087WUU8 490 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 A0A0U1RRA0 63 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 KBTBD11-OT1A0A1B0GTJ5 212 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 SMIM28A0A1B0GU29 152 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 A0A1B0GVT2 93 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 A0A1W2PPV9 198 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 IGLC7A0M8Q6 106 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 B4DEV8 164 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 HHLA1C9JL84 531 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-227ENST00000554491 K7EPK0 472 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 GNGT2O14610 69 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 NBR2O15453 112 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 ZNF217O75362 1048 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 CLDN11O75508 207 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 GRAP2O75791 330 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 MPZL1O95297 269 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 DUS4LO95620 317 aaKnown RBP3.72□□□□□ -1.81
ATXN3-227ENST00000554491 CLDN1O95832 211 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 PLAUP00749 431 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 CD8AP01732 235 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 PIPP12273 146 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-227ENST00000554491 PSMB1P20618 241 aaKnown RBP3.72□□□□□ -1.81
ATXN3-227ENST00000554491 NPY1RP25929 384 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 TIA1P31483 386 aaKnown RBP eCLIP3.72□□□□□ -1.81
ATXN3-227ENST00000554491 DCTP40126 519 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 XCR1P46094 333 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 GSK3BP49841 420 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 GPM6AP51674 278 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 TAS2R20P59543 309 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 RHOAP61586 193 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 RPS28P62857 69 aaKnown RBP3.72□□□□□ -1.81
ATXN3-227ENST00000554491 MEF2BQ02080 365 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-227ENST00000554491 OC90Q02509 493 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-227ENST00000554491 HIST1H1AQ02539 215 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-227ENST00000554491 MFGE8Q08431 387 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-227ENST00000554491 ZNF266Q14584 549 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 ZNF77Q15935 545 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 SSX1Q16384 188 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 SYPL1Q16563 259 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 HIST3H3Q16695 136 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 UPP1Q16831 310 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 KIF26BQ2KJY2 2108 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 TMEM97Q5BJF2 176 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 DCST2Q5T1A1 773 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 ZFAND6Q6FIF0 208 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 Q6ZTK2 550 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 C18orf65Q6ZTR6 163 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 ZNF440Q8IYI8 595 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 CA13Q8N1Q1 262 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 TOMM5Q8N4H5 51 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 ZADH2Q8N4Q0 377 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 FAM71E2Q8N5Q1 922 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 EID2Q8N6I1 236 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 TCEANCQ8N8B7 351 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 OR2T12Q8NG77 320 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 OR5A1Q8NGJ0 315 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 OR1L4Q8NGR5 311 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 OR6N2Q8NGY6 317 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 OR2T27Q8NH04 317 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 OR4F5Q8NH21 305 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 PIGCQ92535 297 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 MS4A6EQ96DS6 147 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 IMP4Q96G21 291 aaKnown RBP3.72□□□□□ -1.81
ATXN3-227ENST00000554491 PGLYRP2Q96PD5 576 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 MS4A10Q96PG2 267 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 UHRF2Q96PU4 802 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 OR4K3Q96R72 315 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 TRIB3Q96RU7 358 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 ATF6BQ99941 703 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 GPR174Q9BXC1 333 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 OR51I1Q9H343 314 aa3.72□□□□□ -1.81
ATXN3-227ENST00000554491 POPDC3Q9HBV1 291 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms