RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 GADD45AP24522 165 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 HRH1P35367 487 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 SOX3P41225 446 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 RFX2P48378 723 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 FOXG1P55316 489 aaPredicted RBP2.27□□□□□ -2.05
PRPF39-206ENST00000554429 HOXC5Q00444 222 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 LTBQ06643 244 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 KLF5Q13887 457 aaPredicted RBP2.27□□□□□ -2.05
PRPF39-206ENST00000554429 INSL4Q14641 139 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 SLC10A1Q14973 349 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 OR8B8Q15620 311 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 ACSF3Q4G176 576 aaPredicted RBP2.27□□□□□ -2.05
PRPF39-206ENST00000554429 SPANXN3Q5MJ09 141 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 SPATA31B1PQ5VZV4 182 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 AGTRAPQ6RW13 159 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 OPN5Q6U736 354 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 SHFQ7M4L6 423 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 PRSS41Q7RTY9 318 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 SLC30A8Q8IWU4 369 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 BPIFB2Q8N4F0 458 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 GCSAMQ8N6F7 178 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 METTL27Q8N6F8 245 aaPredicted RBP2.27□□□□□ -2.05
PRPF39-206ENST00000554429 TPRX1Q8N7U7 411 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 LRTM2Q8N967 370 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 GDPD1Q8N9F7 314 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 LINC01356Q8N9X3 169 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 PNLDC1Q8NA58 520 aaKnown RBP2.27□□□□□ -2.05
PRPF39-206ENST00000554429 OR4F17Q8NGA8 305 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 OR5M3Q8NGP4 307 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 OR6F1Q8NGZ6 308 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 OR4F5Q8NH21 305 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 NEIL3Q8TAT5 605 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 EEF1AKMT1Q8WVE0 214 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 DCUN1D4Q92564 292 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 TSLPQ969D9 159 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 RNF183Q96D59 192 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 OR4F4Q96R69 305 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 NAA38Q9BRA0 125 aaKnown RBP2.27□□□□□ -2.05
PRPF39-206ENST00000554429 DEFB126Q9BYW3 111 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 GTSF1LQ9H1H1 148 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF703Q9H7S9 590 aaPredicted RBP2.27□□□□□ -2.05
PRPF39-206ENST00000554429 ACOT13Q9NPJ3 140 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 FLRT3Q9NZU0 649 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 NUFIP1Q9UHK0 495 aaKnown RBP2.27□□□□□ -2.05
PRPF39-206ENST00000554429 PRO0628Q9UI54 55 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 SIGLEC9Q9Y336 463 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 EXOSC1Q9Y3B2 195 aaKnown RBP2.27□□□□□ -2.05
PRPF39-206ENST00000554429 FBN3Q75N90 2809 aa2.27□□□□□ -2.05
PRPF39-206ENST00000554429 TCRBV3S1A0A5B6 114 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 TMEM72A0PK05 275 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF726A6NNF4 738 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 OVOL3O00110 214 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 NTN1O95631 604 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 CLPSP04118 112 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 CRYBA1P05813 215 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 C8BP07358 591 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 ELANEP08246 267 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 IL6RP08887 468 aaPredicted RBP2.26□□□□□ -2.05
PRPF39-206ENST00000554429 OR5H8P0DN80 308 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 IL7P13232 177 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 RPL7P18124 248 aaKnown RBP2.26□□□□□ -2.05
PRPF39-206ENST00000554429 HOXA5P20719 270 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 SLC2A5P22732 501 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 S100A2P29034 98 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 NTSP30990 170 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 AMTP48728 403 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 RAB5CP51148 216 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 POLR2JP52435 117 aaKnown RBP2.26□□□□□ -2.05
PRPF39-206ENST00000554429 CLDN15P56746 228 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 PNRC1Q12796 327 aaPredicted RBP2.26□□□□□ -2.05
PRPF39-206ENST00000554429 QPRTQ15274 297 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 CTF1Q16619 201 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 TMEM97Q5BJF2 176 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 TECRLQ5HYJ1 363 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF678Q5SXM1 525 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 STEAP4Q687X5 459 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 OR10K2Q6IF99 312 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 LAIR2Q6ISS4 152 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 DHRS11Q6UWP2 260 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 TIFABQ6ZNK6 161 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 LRRC28Q86X40 367 aaPredicted RBP2.26□□□□□ -2.05
PRPF39-206ENST00000554429 PRIMA1Q86XR5 153 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 LINC00471Q8N535 108 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF485Q8NCK3 441 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF555Q8NEP9 628 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 OR2T12Q8NG77 320 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 OR8G5Q8NG78 346 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 ZFAND1Q8TCF1 268 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 DOK4Q8TEW6 326 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF721Q8TF20 911 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 SMAP2Q8WU79 429 aaPredicted RBP2.26□□□□□ -2.05
PRPF39-206ENST00000554429 ORAOV1Q8WV07 137 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 FAM168AQ92567 244 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 RDH5Q92781 318 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF503Q96F45 646 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 SEC22AQ96IW7 307 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 SGK494Q96LW2 274 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 CCDC115Q96NT0 180 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 OR4K3Q96R72 315 aa2.26□□□□□ -2.05
PRPF39-206ENST00000554429 MRPL57Q9BQC6 102 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms