RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 FGGYQ96C11 551 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 UBE2E2Q96LR5 201 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 MBOAT4Q96T53 435 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 ZNF251Q9BRH9 671 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 FAM103A1Q9BTL3 118 aaKnown RBP2.35□□□□□ -2.03
SLIRP-202ENST00000553981 ANKRD60Q9BZ19 345 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 GPR61Q9BZJ8 451 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 PALMDQ9NP74 551 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 EXOSC4Q9NPD3 245 aaKnown RBP2.35□□□□□ -2.03
SLIRP-202ENST00000553981 ACTR3BQ9P1U1 418 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 IKZF2Q9UKS7 526 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 GTF2A1LQ9UNN4 478 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 POLDIP2Q9Y2S7 368 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 AP3M1Q9Y2T2 418 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 NUBP2Q9Y5Y2 271 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 PKHD1P08F94 4074 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 TRGV10A0A0A0MS01 117 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 A0A1W2PN81 502 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 OR4C45A6NMZ5 311 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 DHRS7CA6NNS2 312 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 NCBP2LA6PVI3 153 aaKnown RBP2.34□□□□□ -2.03
SLIRP-202ENST00000553981 OOSP1A8MZH6 123 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 C12orf77C9JDV5 145 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 LINC01619G3V211 115 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 H0YJX3 145 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 M0QZK8 103 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 GABRPO00591 440 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 TOR1AO14656 332 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 SYT7O43581 403 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 SNX3O60493 162 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 ZNF254O75437 659 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 FAM106CPP0CH98 169 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 ZNF44P15621 663 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 PRDX6P30041 224 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 SLC6A1P30531 599 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 CHRNA7P36544 502 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 IFNGR2P38484 337 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 RBP2P50120 134 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 RAB7AP51149 207 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 ZNF137PP52743 207 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 BLVRAP53004 296 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 CRISP1P54107 249 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 MTCP1P56278 107 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 SLC35B1P78383 322 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 GABPB1Q06547 395 aaPredicted RBP2.34□□□□□ -2.03
SLIRP-202ENST00000553981 ALKBH1Q13686 389 aaKnown RBP2.34□□□□□ -2.03
SLIRP-202ENST00000553981 SNCBQ16143 134 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 LRRC36Q1X8D7 754 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 ZNF829Q3KNS6 432 aaPredicted RBP2.34□□□□□ -2.03
SLIRP-202ENST00000553981 CXorf66Q5JRM2 361 aaPredicted RBP2.34□□□□□ -2.03
SLIRP-202ENST00000553981 BCL2L15Q5TBC7 163 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 SLX4IPQ5VYV7 408 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 TMEM268Q5VZI3 342 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 LPCAT4Q643R3 524 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 XAF1Q6GPH4 301 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 SIGIRRQ6IA17 410 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 OR52W1Q6IF63 320 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 FAHD1Q6P587 224 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 ASCL4Q6XD76 172 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 GLDNQ6ZMI3 551 aaPredicted RBP2.34□□□□□ -2.03
SLIRP-202ENST00000553981 ZNF429Q86V71 674 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 FOXRED2Q8IWF2 684 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 OR8H3Q8N146 312 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 FTMTQ8N4E7 242 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 COMMD1Q8N668 190 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 DEFB125Q8N687 156 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 YIPF7Q8N8F6 280 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 SUMF2Q8NBJ7 301 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 OR10V1Q8NGI7 309 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 OR13C9Q8NGT0 318 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 OR2G2Q8NGZ5 317 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 CNIH3Q8TBE1 160 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 CCDC107Q8WV48 283 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 ISOC1Q96CN7 298 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 BORCS8Q96FH0 119 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 C5orf30Q96GV9 206 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 ZNF414Q96IQ9 312 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 AKR1E2Q96JD6 320 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 MS4A10Q96PG2 267 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 NR1H4Q96RI1 486 aaPredicted RBP2.34□□□□□ -2.03
SLIRP-202ENST00000553981 IL4I1Q96RQ9 567 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 OVOL2Q9BRP0 275 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 MRPL20Q9BYC9 149 aaKnown RBP2.34□□□□□ -2.03
SLIRP-202ENST00000553981 MROQ9BYG7 248 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 MAGIXQ9H6Y5 334 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 REEP1Q9H902 201 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 ISG20L2Q9H9L3 353 aaKnown RBP2.34□□□□□ -2.03
SLIRP-202ENST00000553981 PLEKHA3Q9HB20 300 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 SNX5Q9Y5X3 404 aa2.34□□□□□ -2.03
SLIRP-202ENST00000553981 MYCBP2O75592 4640 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 STAB2Q8WWQ8 2551 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 MEIKINA0A087WXM9 373 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 TRAV41A0A0B4J266 112 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 METTL15A6NJ78 407 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 SH2D1BO14796 132 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 GEMIN2O14893 280 aaKnown RBP2.33□□□□□ -2.04
SLIRP-202ENST00000553981 DEGS1O15121 323 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 HSPA12AO43301 675 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 CCDC22O60826 627 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 E2F6O75461 281 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms