RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 OR52L2PQ8NGH6 319 aa6.7□□□□□ -1.34
PSEN1-209ENST00000553855 LINC01006Q8NI28 216 aa6.7□□□□□ -1.34
PSEN1-209ENST00000553855 YPEL2Q96QA6 119 aa6.7□□□□□ -1.34
PSEN1-209ENST00000553855 S1PR3Q99500 378 aa6.7□□□□□ -1.34
PSEN1-209ENST00000553855 SLC25A33Q9BSK2 321 aa6.7□□□□□ -1.34
PSEN1-209ENST00000553855 ABHD14AQ9BUJ0 271 aa6.7□□□□□ -1.34
PSEN1-209ENST00000553855 MRPS26Q9BYN8 205 aaKnown RBP6.7□□□□□ -1.34
PSEN1-209ENST00000553855 GHITMQ9H3K2 345 aa6.7□□□□□ -1.34
PSEN1-209ENST00000553855 DIABLOQ9NR28 239 aa6.7□□□□□ -1.34
PSEN1-209ENST00000553855 RBM7Q9Y580 266 aaKnown RBP6.7□□□□□ -1.34
PSEN1-209ENST00000553855 A0A0B4J203 849 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 TRDCB7Z8K6 153 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 LY6LH3BQJ8 138 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 LDLRAD4O15165 306 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 NOL3O60936 208 aaKnown RBP6.69□□□□□ -1.34
PSEN1-209ENST00000553855 OR2F2O95006 317 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 SNRNP70P08621 437 aaKnown RBP6.69□□□□□ -1.34
PSEN1-209ENST00000553855 HIST1H1DP16402 221 aaKnown RBP6.69□□□□□ -1.34
PSEN1-209ENST00000553855 GNB3P16520 340 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 CD24P25063 80 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 PPP1CCP36873 323 aaKnown RBP6.69□□□□□ -1.34
PSEN1-209ENST00000553855 CEACAM6P40199 344 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 VDAC2P45880 294 aaPredicted RBP6.69□□□□□ -1.34
PSEN1-209ENST00000553855 REG1BP48304 166 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 TMEM50BP56557 158 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 LOXL3P58215 753 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 GNG2P59768 71 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 ZNF816Q0VGE8 651 aaPredicted RBP6.69□□□□□ -1.34
PSEN1-209ENST00000553855 CDNFQ49AH0 187 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 C9orf152Q5JTZ5 239 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 LDLRAD2Q5SZI1 272 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 GPR141Q7Z602 305 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 DRAM1Q8N682 238 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 OR4A4PQ8NGN8 299 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 OR2T10Q8NGZ9 312 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 OR56B4Q8NH76 319 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 LGALS14Q8TCE9 139 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 PIFOQ8TCI5 191 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 RAB24Q969Q5 203 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 YIPF6Q96EC8 236 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 RBM14Q96PK6 669 aaKnown RBP6.69□□□□□ -1.34
PSEN1-209ENST00000553855 GINS4Q9BRT9 223 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 WDR12Q9GZL7 423 aaKnown RBP6.69□□□□□ -1.34
PSEN1-209ENST00000553855 Q9N2K0 584 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 RHBDL2Q9NX52 303 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 PIPOXQ9P0Z9 390 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 SLC23A1Q9UHI7 598 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 ZNF221Q9UK13 617 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 MOB4Q9Y3A3 225 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 CUBNO60494 3623 aa6.69□□□□□ -1.34
PSEN1-209ENST00000553855 A0A0A6YYH2 397 aa6.68□□□□□ -1.34
PSEN1-209ENST00000553855 IGHV1-3A0A0C4DH29 117 aa6.68□□□□□ -1.34
PSEN1-209ENST00000553855 A6NJ64 397 aa6.68□□□□□ -1.34
PSEN1-209ENST00000553855 NCBP2LA6PVI3 153 aaKnown RBP6.68□□□□□ -1.34
PSEN1-209ENST00000553855 M0QZ24 198 aa6.68□□□□□ -1.34
PSEN1-209ENST00000553855 RAB27BO00194 218 aa6.68□□□□□ -1.34
PSEN1-209ENST00000553855 RAB29O14966 203 aa6.68□□□□□ -1.34
PSEN1-209ENST00000553855 FABP7O15540 132 aa6.68□□□□□ -1.34
PSEN1-209ENST00000553855 LANCL1O43813 399 aa6.68□□□□□ -1.34
PSEN1-209ENST00000553855 IGKV1D-33P01593 117 aa6.68□□□□□ -1.34
PSEN1-209ENST00000553855 IGKV1-33P01594 117 aa6.68□□□□□ -1.34
PSEN1-209ENST00000553855 VSIG10L2P0DP72 767 aa6.68□□□□□ -1.34
PSEN1-209ENST00000553855 CD1BP29016 333 aa6.68□□□□□ -1.34
PSEN1-209ENST00000553855 EFNB2P52799 333 aa6.68□□□□□ -1.34
PSEN1-209ENST00000553855 SRSF3P84103 164 aaKnown RBP6.68□□□□□ -1.34
PSEN1-209ENST00000553855 HNF4GQ14541 408 aa6.68□□□□□ -1.34
PSEN1-209ENST00000553855 PNLIPRP3Q17RR3 467 aa6.68□□□□□ -1.34
PSEN1-209ENST00000553855 CT45A1Q5HYN5 189 aa6.68□□□□□ -1.34
PSEN1-209ENST00000553855 PLAC9Q5JTB6 97 aa6.68□□□□□ -1.34
PSEN1-209ENST00000553855 LY6G6FQ5SQ64 297 aa6.68□□□□□ -1.34
PSEN1-209ENST00000553855 ZNF880Q6PDB4 577 aa6.68□□□□□ -1.34
PSEN1-209ENST00000553855 OR10J5Q8NHC4 309 aa6.68□□□□□ -1.34
PSEN1-209ENST00000553855 CT45A3Q8NHU0 189 aa6.68□□□□□ -1.34
PSEN1-209ENST00000553855 RTN4IP1Q8WWV3 396 aaPredicted RBP6.68□□□□□ -1.34
PSEN1-209ENST00000553855 AP3S1Q92572 193 aa6.68□□□□□ -1.34
PSEN1-209ENST00000553855 TAF15Q92804 592 aaKnown RBP eCLIP6.68□□□□□ -1.34
PSEN1-209ENST00000553855 S100A16Q96FQ6 103 aaKnown RBP6.68□□□□□ -1.34
PSEN1-209ENST00000553855 HDHD3Q9BSH5 251 aaPredicted RBP6.68□□□□□ -1.34
PSEN1-209ENST00000553855 FUNDC2Q9BWH2 189 aa6.68□□□□□ -1.34
PSEN1-209ENST00000553855 RNF167Q9H6Y7 350 aa6.68□□□□□ -1.34
PSEN1-209ENST00000553855 TRAV18A0A075B6X5 111 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 SMIM31A0A1B0GVY4 71 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 A0A1W2PPI3 338 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 TRIM64CA6NLI5 447 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 FOXI3A8MTJ6 420 aaPredicted RBP6.67□□□□□ -1.34
PSEN1-209ENST00000553855 MFNGO00587 321 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 ITGB1BP1O14713 200 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 BET1O15155 118 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 FGF16O43320 207 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 CHST1O43916 411 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 MOSP00540 346 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 FCGR3AP08637 254 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 SCTP09683 121 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 CTXN2P0C2S0 81 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 DTYMKP23919 212 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 GPR12P47775 334 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 PROK1P58294 105 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 CBX3Q13185 183 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 GNMTQ14749 295 aa6.67□□□□□ -1.34
PSEN1-209ENST00000553855 HERPUD1Q15011 391 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms