RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 IDI2-AS1Q9NZ38 188 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 ZNF581Q9P0T4 197 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 GNG12Q9UBI6 72 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 JPT1Q9UK76 154 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 GPR132Q9UNW8 380 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 OR2W1Q9Y3N9 320 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 DSCAML1Q8TD84 2053 aa4.13□□□□□ -1.75
VTI1B-202ENST00000553619 IGSF10Q6WRI0 2623 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 USF3Q68DE3 2245 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 TRAV6A0A075B6T7 132 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 IGKV1D-8A0A087WSZ0 117 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 GAGE12BA1L429 117 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 GAGE12HA6NDE8 117 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 RNF212BA8MTL3 300 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 SNRPGP15A8MWD9 76 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 C12orf77C9JDV5 145 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 F5H0A9 414 aaPredicted RBP4.12□□□□□ -1.75
VTI1B-202ENST00000553619 C15orf65H3BRN8 121 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 BOLA2-SMG1P6H3BVE0 249 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 M0R1W7 72 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 GPR31O00270 319 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 TOR1AO14656 332 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 ARPC1BO15143 372 aaKnown RBP4.12□□□□□ -1.75
VTI1B-202ENST00000553619 ENSAO43768 121 aaKnown RBP4.12□□□□□ -1.75
VTI1B-202ENST00000553619 NDUFS7O75251 213 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 NUDT3O95989 172 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 PPYP01298 95 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 IGHV2-5P01817 119 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 CTSDP07339 412 aaPredicted RBP4.12□□□□□ -1.75
VTI1B-202ENST00000553619 IL3RAP26951 378 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 FXYD4P59646 89 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 CLEC12BQ2HXU8 276 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 MORN2Q502X0 79 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 TMEM128Q5BJH2 165 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 IGSF11Q5DX21 431 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 BTNL3Q6UXE8 466 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 HEPN1Q6WQI6 88 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 ZNF841Q6ZN19 808 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 KCTD9Q7L273 389 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 RTN4RL2Q86UN3 420 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 LHFPL1Q86WI0 220 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 SGPP2Q8IWX5 399 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 H1FOOQ8IZA3 346 aaPredicted RBP4.12□□□□□ -1.75
VTI1B-202ENST00000553619 ZNF525Q8N782 197 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 TCTEX1D1Q8N7M0 179 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 TPRX1Q8N7U7 411 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 OR4D10Q8NGI6 311 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 OR13D1Q8NGV5 346 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 RFESDQ8TAC1 157 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 MARCH1Q8TCQ1 289 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 C10orf105Q8TEF2 133 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 TNFRSF14Q92956 283 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 MOB3AQ96BX8 217 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 PERPQ96FX8 193 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 SLC5A7Q9GZV3 580 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 C20orf85Q9H1P6 137 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 MMP28Q9H239 520 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 HEXA-AS1Q9H8Q6 139 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 LINC00574Q9H8X3 128 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 RDH8Q9NYR8 311 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 CALYQ9NYX4 217 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 PIPOXQ9P0Z9 390 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 ZNF221Q9UK13 617 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 GAB2Q9UQC2 676 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 TMA7Q9Y2S6 64 aaKnown RBP4.12□□□□□ -1.75
VTI1B-202ENST00000553619 DSPP15924 2871 aaKnown RBP4.12□□□□□ -1.75
VTI1B-202ENST00000553619 ARID1AO14497 2285 aa4.12□□□□□ -1.75
VTI1B-202ENST00000553619 PRRC2CQ9Y520 2896 aaKnown RBP4.11□□□□□ -1.75
VTI1B-202ENST00000553619 DOPEY1Q5JWR5 2465 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 ZNF462Q96JM2 2506 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 TRAV39A0A0B4J263 110 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 TEX13DA0A0J9YY54 714 aaPredicted RBP4.11□□□□□ -1.75
VTI1B-202ENST00000553619 OR5H14A6NHG9 310 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 C17orf98A8MV24 154 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 A8MXK9 166 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 VWC2LB2RUY7 222 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 RAB29O14966 203 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 CREBL2O60519 120 aaPredicted RBP4.11□□□□□ -1.75
VTI1B-202ENST00000553619 TUSC2O75896 110 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 TSPAN9O75954 239 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 LY6HO94772 140 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 ATG12O94817 140 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 TFF1P04155 84 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 OR4E1P0C645 316 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 OR8U9P0C7N5 309 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 AKR1C4P17516 323 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 USF1P22415 310 aaPredicted RBP4.11□□□□□ -1.75
VTI1B-202ENST00000553619 AADACP22760 399 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 NFYAP23511 347 aaPredicted RBP4.11□□□□□ -1.75
VTI1B-202ENST00000553619 GATA3P23771 443 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 NFYBP25208 207 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 BTCP35070 178 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 RND3P61587 244 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 LMO4P61968 165 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 HOXA4Q00056 320 aaPredicted RBP4.11□□□□□ -1.75
VTI1B-202ENST00000553619 DHODHQ02127 395 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 CATR1Q13166 79 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 C17orf58Q2M2W7 97 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 AADACL3Q5VUY0 350 aa4.11□□□□□ -1.75
VTI1B-202ENST00000553619 ZNF660Q6AZW8 331 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms