RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 OR4F4Q96R69 305 aa12.17□□□□□ -0.46
SHMT2-204ENST00000553324 CITED2Q99967 270 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-204ENST00000553324 NABP2Q9BQ15 211 aa12.17□□□□□ -0.46
SHMT2-204ENST00000553324 AGMATQ9BSE5 352 aa12.17□□□□□ -0.46
SHMT2-204ENST00000553324 GON7Q9BXV9 100 aa12.17□□□□□ -0.46
SHMT2-204ENST00000553324 ABCG5Q9H222 651 aa12.17□□□□□ -0.46
SHMT2-204ENST00000553324 IFI27L2Q9H2X8 130 aa12.17□□□□□ -0.46
SHMT2-204ENST00000553324 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.17□□□□□ -0.46
SHMT2-204ENST00000553324 PLSCR3Q9NRY6 295 aa12.17□□□□□ -0.46
SHMT2-204ENST00000553324 ETV7Q9Y603 341 aa12.17□□□□□ -0.46
SHMT2-204ENST00000553324 A0A075B6Q4 140 aa12.16□□□□□ -0.46
SHMT2-204ENST00000553324 SAA2-SAA4A0A096LPE2 208 aa12.16□□□□□ -0.46
SHMT2-204ENST00000553324 SH2D7A6NKC9 451 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-204ENST00000553324 ZNF736B4DX44 427 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-204ENST00000553324 ST8SIA5O15466 376 aa12.16□□□□□ -0.46
SHMT2-204ENST00000553324 FABP7O15540 132 aa12.16□□□□□ -0.46
SHMT2-204ENST00000553324 KCNAB3O43448 404 aa12.16□□□□□ -0.46
SHMT2-204ENST00000553324 FCGR3AP08637 254 aa12.16□□□□□ -0.46
SHMT2-204ENST00000553324 SAA2P0DJI9 122 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-204ENST00000553324 DTYMKP23919 212 aa12.16□□□□□ -0.46
SHMT2-204ENST00000553324 SLC35B1P78383 322 aa12.16□□□□□ -0.46
SHMT2-204ENST00000553324 MXD1Q05195 221 aa12.16□□□□□ -0.46
SHMT2-204ENST00000553324 NSUN5P1Q3KNT7 163 aa12.16□□□□□ -0.46
SHMT2-204ENST00000553324 CDNFQ49AH0 187 aa12.16□□□□□ -0.46
SHMT2-204ENST00000553324 Q6ZS49 121 aa12.16□□□□□ -0.46
SHMT2-204ENST00000553324 Q8N9W7 124 aa12.16□□□□□ -0.46
SHMT2-204ENST00000553324 OR10J5Q8NHC4 309 aa12.16□□□□□ -0.46
SHMT2-204ENST00000553324 TOLLIPQ9H0E2 274 aa12.16□□□□□ -0.46
SHMT2-204ENST00000553324 C11orf54Q9H0W9 315 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-204ENST00000553324 ZNF221Q9UK13 617 aa12.16□□□□□ -0.46
SHMT2-204ENST00000553324 TSSC4Q9Y5U2 329 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-204ENST00000553324 TCRBV4S1A1TA0A5B7 111 aa12.15□□□□□ -0.46
SHMT2-204ENST00000553324 PSMB11A5LHX3 300 aa12.15□□□□□ -0.46
SHMT2-204ENST00000553324 AP4M1O00189 453 aa12.15□□□□□ -0.46
SHMT2-204ENST00000553324 AIREO43918 545 aa12.15□□□□□ -0.46
SHMT2-204ENST00000553324 TSPAN15O95858 294 aa12.15□□□□□ -0.46
SHMT2-204ENST00000553324 GSTP1P09211 210 aaKnown RBP12.15□□□□□ -0.46
SHMT2-204ENST00000553324 SNRPBP14678 240 aaKnown RBP12.15□□□□□ -0.46
SHMT2-204ENST00000553324 OR3A3P47888 321 aa12.15□□□□□ -0.46
SHMT2-204ENST00000553324 IDNKQ5T6J7 187 aa12.15□□□□□ -0.46
SHMT2-204ENST00000553324 HACD4Q5VWC8 232 aa12.15□□□□□ -0.46
SHMT2-204ENST00000553324 COMMD1Q8N668 190 aa12.15□□□□□ -0.46
SHMT2-204ENST00000553324 ZNF251Q9BRH9 671 aa12.15□□□□□ -0.46
SHMT2-204ENST00000553324 MRPL20Q9BYC9 149 aaKnown RBP12.15□□□□□ -0.46
SHMT2-204ENST00000553324 DCSTAMPQ9H295 470 aa12.15□□□□□ -0.46
SHMT2-204ENST00000553324 RDH8Q9NYR8 311 aa12.15□□□□□ -0.46
SHMT2-204ENST00000553324 OR1A1Q9P1Q5 309 aa12.15□□□□□ -0.46
SHMT2-204ENST00000553324 A0A0A6YYH2 397 aa12.14□□□□□ -0.47
SHMT2-204ENST00000553324 OR5H14A6NHG9 310 aa12.14□□□□□ -0.47
SHMT2-204ENST00000553324 A6NJ64 397 aa12.14□□□□□ -0.47
SHMT2-204ENST00000553324 CTXN2P0C2S0 81 aa12.14□□□□□ -0.47
SHMT2-204ENST00000553324 GSTT2P0CG29 244 aa12.14□□□□□ -0.47
SHMT2-204ENST00000553324 GSTT2BP0CG30 244 aa12.14□□□□□ -0.47
SHMT2-204ENST00000553324 SOX6P35712 828 aa12.14□□□□□ -0.47
SHMT2-204ENST00000553324 F2RL1P55085 397 aa12.14□□□□□ -0.47
SHMT2-204ENST00000553324 ACTBP60709 375 aa12.14□□□□□ -0.47
SHMT2-204ENST00000553324 MMDQ15546 238 aa12.14□□□□□ -0.47
SHMT2-204ENST00000553324 PNLIPRP3Q17RR3 467 aa12.14□□□□□ -0.47
SHMT2-204ENST00000553324 FAM71E2Q8N5Q1 922 aa12.14□□□□□ -0.47
SHMT2-204ENST00000553324 LGALS14Q8TCE9 139 aa12.14□□□□□ -0.47
SHMT2-204ENST00000553324 R3HDM4Q96D70 268 aa12.14□□□□□ -0.47
SHMT2-204ENST00000553324 YIPF6Q96EC8 236 aa12.14□□□□□ -0.47
SHMT2-204ENST00000553324 ABHD14BQ96IU4 210 aa12.14□□□□□ -0.47
SHMT2-204ENST00000553324 RNF5Q99942 180 aa12.14□□□□□ -0.47
SHMT2-204ENST00000553324 CABLES2Q9BTV7 478 aa12.14□□□□□ -0.47
SHMT2-204ENST00000553324 RNF167Q9H6Y7 350 aa12.14□□□□□ -0.47
SHMT2-204ENST00000553324 RHBDL2Q9NX52 303 aa12.14□□□□□ -0.47
SHMT2-204ENST00000553324 GAB2Q9UQC2 676 aa12.14□□□□□ -0.47
SHMT2-204ENST00000553324 TRBV6-7A0A0A0MS04 114 aa12.13□□□□□ -0.47
SHMT2-204ENST00000553324 IGKV1-6A0A0C4DH72 117 aa12.13□□□□□ -0.47
SHMT2-204ENST00000553324 TRIM64CA6NLI5 447 aa12.13□□□□□ -0.47
SHMT2-204ENST00000553324 BET1O15155 118 aa12.13□□□□□ -0.47
SHMT2-204ENST00000553324 CLEC2LP0C7M8 214 aa12.13□□□□□ -0.47
SHMT2-204ENST00000553324 CT45A6P0DMU7 189 aa12.13□□□□□ -0.47
SHMT2-204ENST00000553324 CT45A5P0DMU8 189 aa12.13□□□□□ -0.47
SHMT2-204ENST00000553324 CT45A7P0DMV0 189 aa12.13□□□□□ -0.47
SHMT2-204ENST00000553324 GPR12P47775 334 aa12.13□□□□□ -0.47
SHMT2-204ENST00000553324 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-204ENST00000553324 GINS4Q9BRT9 223 aa12.13□□□□□ -0.47
SHMT2-204ENST00000553324 DIABLOQ9NR28 239 aa12.13□□□□□ -0.47
SHMT2-204ENST00000553324 ZFP57Q9NU63 452 aa12.13□□□□□ -0.47
SHMT2-204ENST00000553324 KIAA1456Q9P272 454 aa12.13□□□□□ -0.47
SHMT2-204ENST00000553324 ZNF230Q9UIE0 474 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-204ENST00000553324 SPATA2Q9UM82 520 aa12.13□□□□□ -0.47
SHMT2-204ENST00000553324 TET2Q6N021 2002 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-204ENST00000553324 RBBP9O75884 186 aa12.12□□□□□ -0.47
SHMT2-204ENST00000553324 GNG2P59768 71 aa12.12□□□□□ -0.47
SHMT2-204ENST00000553324 ZNF260Q3ZCT1 412 aa12.12□□□□□ -0.47
SHMT2-204ENST00000553324 RPL39P5Q59GN2 51 aa12.12□□□□□ -0.47
SHMT2-204ENST00000553324 IGSF11Q5DX21 431 aa12.12□□□□□ -0.47
SHMT2-204ENST00000553324 TEX38Q6PEX7 206 aa12.12□□□□□ -0.47
SHMT2-204ENST00000553324 STPG2Q8N412 459 aa12.12□□□□□ -0.47
SHMT2-204ENST00000553324 NPBQ8NG41 125 aa12.12□□□□□ -0.47
SHMT2-204ENST00000553324 OR5AN1Q8NGI8 311 aa12.12□□□□□ -0.47
SHMT2-204ENST00000553324 ST6GALNAC5Q9BVH7 336 aa12.12□□□□□ -0.47
SHMT2-204ENST00000553324 PARP12Q9H0J9 701 aaKnown RBP12.12□□□□□ -0.47
SHMT2-204ENST00000553324 RNF150Q9ULK6 438 aa12.12□□□□□ -0.47
SHMT2-204ENST00000553324 WASHC3Q9Y3C0 194 aa12.12□□□□□ -0.47
SHMT2-204ENST00000553324 RBM7Q9Y580 266 aaKnown RBP12.12□□□□□ -0.47
SHMT2-204ENST00000553324 WNK1Q9H4A3 2382 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms