RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 NUBP2Q9Y5Y2 271 aa11.86□□□□□ -0.51
RAB5C-205ENST00000550013 IRGMA1A4Y4 181 aa11.85□□□□□ -0.51
RAB5C-205ENST00000550013 DYNC1I1O14576 645 aa11.85□□□□□ -0.51
RAB5C-205ENST00000550013 RRHO14718 337 aa11.85□□□□□ -0.51
RAB5C-205ENST00000550013 RGS11O94810 467 aa11.85□□□□□ -0.51
RAB5C-205ENST00000550013 OR8U9P0C7N5 309 aa11.85□□□□□ -0.51
RAB5C-205ENST00000550013 CAPGP40121 348 aa11.85□□□□□ -0.51
RAB5C-205ENST00000550013 PLGLAQ15195 96 aa11.85□□□□□ -0.51
RAB5C-205ENST00000550013 HMGN3Q15651 99 aa11.85□□□□□ -0.51
RAB5C-205ENST00000550013 RPL39P5Q59GN2 51 aa11.85□□□□□ -0.51
RAB5C-205ENST00000550013 CDH26Q8IXH8 852 aa11.85□□□□□ -0.51
RAB5C-205ENST00000550013 ZNF555Q8NEP9 628 aa11.85□□□□□ -0.51
RAB5C-205ENST00000550013 GALMQ96C23 342 aa11.85□□□□□ -0.51
RAB5C-205ENST00000550013 MS4A10Q96PG2 267 aa11.85□□□□□ -0.51
RAB5C-205ENST00000550013 OR4C12Q96R67 309 aa11.85□□□□□ -0.51
RAB5C-205ENST00000550013 SULT4A1Q9BR01 284 aa11.85□□□□□ -0.51
RAB5C-205ENST00000550013 TM2D3Q9BRN9 247 aa11.85□□□□□ -0.51
RAB5C-205ENST00000550013 FAM103A1Q9BTL3 118 aaKnown RBP11.85□□□□□ -0.51
RAB5C-205ENST00000550013 PARP12Q9H0J9 701 aaKnown RBP11.85□□□□□ -0.51
RAB5C-205ENST00000550013 TNCP24821 2201 aa11.84□□□□□ -0.51
RAB5C-205ENST00000550013 HSPB1P04792 205 aaKnown RBP11.84□□□□□ -0.51
RAB5C-205ENST00000550013 CT45A6P0DMU7 189 aa11.84□□□□□ -0.51
RAB5C-205ENST00000550013 CT45A5P0DMU8 189 aa11.84□□□□□ -0.51
RAB5C-205ENST00000550013 CT45A7P0DMV0 189 aa11.84□□□□□ -0.51
RAB5C-205ENST00000550013 IGHV4-30-4P0DP06 118 aa11.84□□□□□ -0.51
RAB5C-205ENST00000550013 DOC2BQ14184 412 aa11.84□□□□□ -0.51
RAB5C-205ENST00000550013 PPP1R27Q86WC6 154 aa11.84□□□□□ -0.51
RAB5C-205ENST00000550013 Q8N1Y9 231 aa11.84□□□□□ -0.51
RAB5C-205ENST00000550013 PQLC1Q8N2U9 271 aa11.84□□□□□ -0.51
RAB5C-205ENST00000550013 TCTEX1D1Q8N7M0 179 aa11.84□□□□□ -0.51
RAB5C-205ENST00000550013 IL1F10Q8WWZ1 152 aa11.84□□□□□ -0.51
RAB5C-205ENST00000550013 TMEM80Q96HE8 168 aa11.84□□□□□ -0.51
RAB5C-205ENST00000550013 CLCC1Q96S66 551 aa11.84□□□□□ -0.51
RAB5C-205ENST00000550013 S100A14Q9HCY8 104 aa11.84□□□□□ -0.51
RAB5C-205ENST00000550013 H0YJW9 148 aa11.83□□□□□ -0.52
RAB5C-205ENST00000550013 TPPP2P59282 170 aa11.83□□□□□ -0.52
RAB5C-205ENST00000550013 ACTBL2Q562R1 376 aa11.83□□□□□ -0.52
RAB5C-205ENST00000550013 OR10K2Q6IF99 312 aa11.83□□□□□ -0.52
RAB5C-205ENST00000550013 FAM71F2Q6NXP2 309 aa11.83□□□□□ -0.52
RAB5C-205ENST00000550013 CD200R1LQ6Q8B3 271 aa11.83□□□□□ -0.52
RAB5C-205ENST00000550013 UNQ5815/PRO19632Q6UWF5 114 aa11.83□□□□□ -0.52
RAB5C-205ENST00000550013 C6orf201Q7Z4U5 140 aa11.83□□□□□ -0.52
RAB5C-205ENST00000550013 FLYWCH2Q96CP2 140 aaKnown RBP11.83□□□□□ -0.52
RAB5C-205ENST00000550013 FAAP24Q9BTP7 215 aa11.83□□□□□ -0.52
RAB5C-205ENST00000550013 SMPD3Q9NY59 655 aaPredicted RBP11.83□□□□□ -0.52
RAB5C-205ENST00000550013 ABRACLQ9P1F3 81 aa11.83□□□□□ -0.52
RAB5C-205ENST00000550013 STEAP1Q9UHE8 339 aa11.83□□□□□ -0.52
RAB5C-205ENST00000550013 HYDINQ4G0P3 5121 aa11.83□□□□□ -0.52
RAB5C-205ENST00000550013 H7C2Y5 167 aa11.82□□□□□ -0.52
RAB5C-205ENST00000550013 RAB29O14966 203 aa11.82□□□□□ -0.52
RAB5C-205ENST00000550013 LDLRAD4O15165 306 aa11.82□□□□□ -0.52
RAB5C-205ENST00000550013 GSTP1P09211 210 aaKnown RBP11.82□□□□□ -0.52
RAB5C-205ENST00000550013 TMEM267Q0VDI3 215 aaPredicted RBP11.82□□□□□ -0.52
RAB5C-205ENST00000550013 PYHIN1Q6K0P9 492 aa11.82□□□□□ -0.52
RAB5C-205ENST00000550013 SVOPQ8N4V2 548 aa11.82□□□□□ -0.52
RAB5C-205ENST00000550013 NKAIN3Q8N8D7 197 aa11.82□□□□□ -0.52
RAB5C-205ENST00000550013 LFNGQ8NES3 379 aa11.82□□□□□ -0.52
RAB5C-205ENST00000550013 GGHQ92820 318 aa11.82□□□□□ -0.52
RAB5C-205ENST00000550013 ABHD14BQ96IU4 210 aa11.82□□□□□ -0.52
RAB5C-205ENST00000550013 RHOVQ96L33 236 aa11.82□□□□□ -0.52
RAB5C-205ENST00000550013 NEDD4LQ96PU5 975 aa11.82□□□□□ -0.52
RAB5C-205ENST00000550013 UQCC2Q9BRT2 126 aa11.82□□□□□ -0.52
RAB5C-205ENST00000550013 RSRP1Q9BUV0 290 aa11.82□□□□□ -0.52
RAB5C-205ENST00000550013 EDA2RQ9HAV5 297 aa11.82□□□□□ -0.52
RAB5C-205ENST00000550013 C19orf73Q9NVV2 129 aa11.82□□□□□ -0.52
RAB5C-205ENST00000550013 CNOT2Q9NZN8 540 aaKnown RBP11.82□□□□□ -0.52
RAB5C-205ENST00000550013 PIPOXQ9P0Z9 390 aa11.82□□□□□ -0.52
RAB5C-205ENST00000550013 SLC23A1Q9UHI7 598 aa11.82□□□□□ -0.52
RAB5C-205ENST00000550013 LRRC42Q9Y546 428 aa11.82□□□□□ -0.52
RAB5C-205ENST00000550013 OR5H14A6NHG9 310 aa11.81□□□□□ -0.52
RAB5C-205ENST00000550013 HSPA12AO43301 675 aa11.81□□□□□ -0.52
RAB5C-205ENST00000550013 IGLV1-51P01701 117 aa11.81□□□□□ -0.52
RAB5C-205ENST00000550013 CELP19835 753 aa11.81□□□□□ -0.52
RAB5C-205ENST00000550013 TAS2R43P59537 309 aa11.81□□□□□ -0.52
RAB5C-205ENST00000550013 ST3GAL4Q11206 333 aa11.81□□□□□ -0.52
RAB5C-205ENST00000550013 MED21Q13503 144 aa11.81□□□□□ -0.52
RAB5C-205ENST00000550013 PSG5Q15238 335 aa11.81□□□□□ -0.52
RAB5C-205ENST00000550013 AKIRIN2Q53H80 203 aa11.81□□□□□ -0.52
RAB5C-205ENST00000550013 ADAMTSL5Q6ZMM2 481 aa11.81□□□□□ -0.52
RAB5C-205ENST00000550013 SETD6Q8TBK2 473 aa11.81□□□□□ -0.52
RAB5C-205ENST00000550013 ISOC1Q96CN7 298 aa11.81□□□□□ -0.52
RAB5C-205ENST00000550013 NICN1Q9BSH3 213 aa11.81□□□□□ -0.52
RAB5C-205ENST00000550013 ELOVL1Q9BW60 279 aa11.81□□□□□ -0.52
RAB5C-205ENST00000550013 KCNK15Q9H427 330 aa11.81□□□□□ -0.52
RAB5C-205ENST00000550013 CHMP1AQ9HD42 196 aaPredicted RBP11.81□□□□□ -0.52
RAB5C-205ENST00000550013 METTL1Q9UBP6 276 aaKnown RBP11.81□□□□□ -0.52
RAB5C-205ENST00000550013 RNF150Q9ULK6 438 aa11.81□□□□□ -0.52
RAB5C-205ENST00000550013 STUB1Q9UNE7 303 aa11.81□□□□□ -0.52
RAB5C-205ENST00000550013 WASHC3Q9Y3C0 194 aa11.81□□□□□ -0.52
RAB5C-205ENST00000550013 NAPSAO96009 420 aa11.8□□□□□ -0.52
RAB5C-205ENST00000550013 CA2P00918 260 aa11.8□□□□□ -0.52
RAB5C-205ENST00000550013 TRGV3P03979 118 aa11.8□□□□□ -0.52
RAB5C-205ENST00000550013 HTR2CP28335 458 aa11.8□□□□□ -0.52
RAB5C-205ENST00000550013 INSL4Q14641 139 aa11.8□□□□□ -0.52
RAB5C-205ENST00000550013 ZNF880Q6PDB4 577 aa11.8□□□□□ -0.52
RAB5C-205ENST00000550013 ANKRD13BQ86YJ7 626 aa11.8□□□□□ -0.52
RAB5C-205ENST00000550013 C10orf67Q8IYJ2 551 aa11.8□□□□□ -0.52
RAB5C-205ENST00000550013 DRAXINQ8NBI3 349 aaPredicted RBP11.8□□□□□ -0.52
RAB5C-205ENST00000550013 OR5AN1Q8NGI8 311 aa11.8□□□□□ -0.52
RAB5C-205ENST00000550013 CYGBQ8WWM9 190 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms