RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 Q96M66 194 aa9.97□□□□□ -0.81
PTCH1-218ENST00000548945 YPEL2Q96QA6 119 aa9.97□□□□□ -0.81
PTCH1-218ENST00000548945 MGLLQ99685 303 aa9.97□□□□□ -0.81
PTCH1-218ENST00000548945 NABP2Q9BQ15 211 aa9.97□□□□□ -0.81
PTCH1-218ENST00000548945 CST11Q9H112 138 aa9.97□□□□□ -0.81
PTCH1-218ENST00000548945 ISYNA1Q9NPH2 558 aa9.97□□□□□ -0.81
PTCH1-218ENST00000548945 PARP11Q9NR21 331 aa9.97□□□□□ -0.81
PTCH1-218ENST00000548945 NOL3O60936 208 aaKnown RBP9.96□□□□□ -0.82
PTCH1-218ENST00000548945 HSMCR30P0CW71 290 aa9.96□□□□□ -0.82
PTCH1-218ENST00000548945 BLVRBP30043 206 aaPredicted RBP9.96□□□□□ -0.82
PTCH1-218ENST00000548945 MLLT11Q13015 90 aaPredicted RBP9.96□□□□□ -0.82
PTCH1-218ENST00000548945 C19orf54Q5BKX5 351 aa9.96□□□□□ -0.82
PTCH1-218ENST00000548945 AWAT2Q6E213 333 aa9.96□□□□□ -0.82
PTCH1-218ENST00000548945 LIN54Q6MZP7 749 aa9.96□□□□□ -0.82
PTCH1-218ENST00000548945 FAM71F2Q6NXP2 309 aa9.96□□□□□ -0.82
PTCH1-218ENST00000548945 ZNF833PQ6ZTB9 187 aa9.96□□□□□ -0.82
PTCH1-218ENST00000548945 LYPD6Q86Y78 171 aa9.96□□□□□ -0.82
PTCH1-218ENST00000548945 SBSPONQ8IVN8 264 aa9.96□□□□□ -0.82
PTCH1-218ENST00000548945 TCTEX1D1Q8N7M0 179 aa9.96□□□□□ -0.82
PTCH1-218ENST00000548945 ZNF485Q8NCK3 441 aa9.96□□□□□ -0.82
PTCH1-218ENST00000548945 DCUN1D4Q92564 292 aa9.96□□□□□ -0.82
PTCH1-218ENST00000548945 PGLYRP3Q96LB9 341 aa9.96□□□□□ -0.82
PTCH1-218ENST00000548945 RCHY1Q96PM5 261 aa9.96□□□□□ -0.82
PTCH1-218ENST00000548945 UQCC2Q9BRT2 126 aa9.96□□□□□ -0.82
PTCH1-218ENST00000548945 MRPL20Q9BYC9 149 aaKnown RBP9.96□□□□□ -0.82
PTCH1-218ENST00000548945 SELENOIQ9C0D9 397 aa9.96□□□□□ -0.82
PTCH1-218ENST00000548945 RBM38Q9H0Z9 239 aaKnown RBP9.96□□□□□ -0.82
PTCH1-218ENST00000548945 KIAA1456Q9P272 454 aa9.96□□□□□ -0.82
PTCH1-218ENST00000548945 RYR2Q92736 4967 aa9.95□□□□□ -0.82
PTCH1-218ENST00000548945 TNCP24821 2201 aa9.95□□□□□ -0.82
PTCH1-218ENST00000548945 CCDC160A6NGH7 325 aa9.95□□□□□ -0.82
PTCH1-218ENST00000548945 ZNF701M0R085 212 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-218ENST00000548945 PDCD6O75340 191 aa9.95□□□□□ -0.82
PTCH1-218ENST00000548945 CRTAPO75718 401 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-218ENST00000548945 PPP1CCP36873 323 aaKnown RBP9.95□□□□□ -0.82
PTCH1-218ENST00000548945 TAS2R43P59537 309 aa9.95□□□□□ -0.82
PTCH1-218ENST00000548945 DOC2BQ14184 412 aa9.95□□□□□ -0.82
PTCH1-218ENST00000548945 GNMTQ14749 295 aa9.95□□□□□ -0.82
PTCH1-218ENST00000548945 ZNF660Q6AZW8 331 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-218ENST00000548945 SIGIRRQ6IA17 410 aa9.95□□□□□ -0.82
PTCH1-218ENST00000548945 CLVS1Q8IUQ0 354 aaPredicted RBP9.95□□□□□ -0.82
PTCH1-218ENST00000548945 NKAIN3Q8N8D7 197 aa9.95□□□□□ -0.82
PTCH1-218ENST00000548945 OR52L2PQ8NGH6 319 aa9.95□□□□□ -0.82
PTCH1-218ENST00000548945 MRPL30Q8TCC3 161 aaKnown RBP9.95□□□□□ -0.82
PTCH1-218ENST00000548945 THRSPQ92748 146 aa9.95□□□□□ -0.82
PTCH1-218ENST00000548945 GALMQ96C23 342 aa9.95□□□□□ -0.82
PTCH1-218ENST00000548945 DGCR14Q96DF8 476 aaKnown RBP9.95□□□□□ -0.82
PTCH1-218ENST00000548945 RBMXL1Q96E39 390 aaKnown RBP9.95□□□□□ -0.82
PTCH1-218ENST00000548945 YIPF6Q96EC8 236 aa9.95□□□□□ -0.82
PTCH1-218ENST00000548945 RITA1Q96K30 269 aa9.95□□□□□ -0.82
PTCH1-218ENST00000548945 OR5B12Q96R08 314 aa9.95□□□□□ -0.82
PTCH1-218ENST00000548945 OR14A2Q96R54 314 aa9.95□□□□□ -0.82
PTCH1-218ENST00000548945 TOLLIPQ9H0E2 274 aa9.95□□□□□ -0.82
PTCH1-218ENST00000548945 GHITMQ9H3K2 345 aa9.95□□□□□ -0.82
PTCH1-218ENST00000548945 BANF2Q9H503 90 aa9.95□□□□□ -0.82
PTCH1-218ENST00000548945 GHRLQ9UBU3 117 aa9.95□□□□□ -0.82
PTCH1-218ENST00000548945 CEPT1Q9Y6K0 416 aa9.95□□□□□ -0.82
PTCH1-218ENST00000548945 SAA2-SAA4A0A096LPE2 208 aa9.94□□□□□ -0.82
PTCH1-218ENST00000548945 UBE2QL1A1L167 161 aa9.94□□□□□ -0.82
PTCH1-218ENST00000548945 LINC01619G3V211 115 aa9.94□□□□□ -0.82
PTCH1-218ENST00000548945 ARPC1BO15143 372 aaKnown RBP9.94□□□□□ -0.82
PTCH1-218ENST00000548945 SAP30O75446 220 aa9.94□□□□□ -0.82
PTCH1-218ENST00000548945 MAS1P04201 325 aa9.94□□□□□ -0.82
PTCH1-218ENST00000548945 CD1AP06126 327 aa9.94□□□□□ -0.82
PTCH1-218ENST00000548945 LGALS1P09382 135 aaKnown RBP9.94□□□□□ -0.82
PTCH1-218ENST00000548945 SAA2P0DJI9 122 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-218ENST00000548945 CD36P16671 472 aa9.94□□□□□ -0.82
PTCH1-218ENST00000548945 CNTFRP26992 372 aa9.94□□□□□ -0.82
PTCH1-218ENST00000548945 TMBIM6P55061 237 aa9.94□□□□□ -0.82
PTCH1-218ENST00000548945 GPR107Q5VW38 600 aa9.94□□□□□ -0.82
PTCH1-218ENST00000548945 PYHIN1Q6K0P9 492 aa9.94□□□□□ -0.82
PTCH1-218ENST00000548945 ACSM6Q6P461 480 aa9.94□□□□□ -0.82
PTCH1-218ENST00000548945 ANKRD13BQ86YJ7 626 aa9.94□□□□□ -0.82
PTCH1-218ENST00000548945 OR2AK2Q8NG84 335 aa9.94□□□□□ -0.82
PTCH1-218ENST00000548945 OR6Q1Q8NGQ2 317 aa9.94□□□□□ -0.82
PTCH1-218ENST00000548945 RAB2BQ8WUD1 216 aa9.94□□□□□ -0.82
PTCH1-218ENST00000548945 DLX4Q92988 240 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-218ENST00000548945 DERL3Q96Q80 235 aa9.94□□□□□ -0.82
PTCH1-218ENST00000548945 BCL7BQ9BQE9 202 aa9.94□□□□□ -0.82
PTCH1-218ENST00000548945 FUNDC2Q9BWH2 189 aa9.94□□□□□ -0.82
PTCH1-218ENST00000548945 ZMAT4Q9H898 229 aa9.94□□□□□ -0.82
PTCH1-218ENST00000548945 TPSG1Q9NRR2 321 aa9.94□□□□□ -0.82
PTCH1-218ENST00000548945 RSL24D1Q9UHA3 163 aaKnown RBP9.94□□□□□ -0.82
PTCH1-218ENST00000548945 FOXA2Q9Y261 457 aaPredicted RBP9.94□□□□□ -0.82
PTCH1-218ENST00000548945 SOX15O60248 233 aa9.93□□□□□ -0.82
PTCH1-218ENST00000548945 OR8U9P0C7N5 309 aa9.93□□□□□ -0.82
PTCH1-218ENST00000548945 FRMD6-AS1P0C7T7 363 aa9.93□□□□□ -0.82
PTCH1-218ENST00000548945 UBBP0CG47 229 aa9.93□□□□□ -0.82
PTCH1-218ENST00000548945 GP9P14770 177 aa9.93□□□□□ -0.82
PTCH1-218ENST00000548945 SPNP16150 400 aa9.93□□□□□ -0.82
PTCH1-218ENST00000548945 CPEP16870 476 aa9.93□□□□□ -0.82
PTCH1-218ENST00000548945 MAPK3P27361 379 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-218ENST00000548945 OR3A3P47888 321 aa9.93□□□□□ -0.82
PTCH1-218ENST00000548945 NDPQ00604 133 aa9.93□□□□□ -0.82
PTCH1-218ENST00000548945 TMEM267Q0VDI3 215 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-218ENST00000548945 TPBGQ13641 420 aa9.93□□□□□ -0.82
PTCH1-218ENST00000548945 HMGN3Q15651 99 aa9.93□□□□□ -0.82
PTCH1-218ENST00000548945 TIMM50Q3ZCQ8 353 aa9.93□□□□□ -0.82
PTCH1-218ENST00000548945 CD200R1LQ6Q8B3 271 aa9.93□□□□□ -0.82
PTCH1-218ENST00000548945 UFD1Q92890 307 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms