RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 ARHGAP5-AS1Q96IT6 56 aa10.98□□□□□ -0.65
PTCH1-217ENST00000548420 YPEL2Q96QA6 119 aa10.98□□□□□ -0.65
PTCH1-217ENST00000548420 PECRQ9BY49 303 aa10.98□□□□□ -0.65
PTCH1-217ENST00000548420 OR51E2Q9H255 320 aa10.98□□□□□ -0.65
PTCH1-217ENST00000548420 ZMAT4Q9H898 229 aa10.98□□□□□ -0.65
PTCH1-217ENST00000548420 GNG12Q9UBI6 72 aa10.98□□□□□ -0.65
PTCH1-217ENST00000548420 AK3Q9UIJ7 227 aa10.98□□□□□ -0.65
PTCH1-217ENST00000548420 JPT1Q9UK76 154 aa10.98□□□□□ -0.65
PTCH1-217ENST00000548420 SSR3Q9UNL2 185 aa10.98□□□□□ -0.65
PTCH1-217ENST00000548420 KCNK7Q9Y2U2 307 aa10.98□□□□□ -0.65
PTCH1-217ENST00000548420 SORL1Q92673 2214 aa10.98□□□□□ -0.65
PTCH1-217ENST00000548420 IGHV1-3A0A0C4DH29 117 aa10.97□□□□□ -0.65
PTCH1-217ENST00000548420 TRIM64CA6NLI5 447 aa10.97□□□□□ -0.65
PTCH1-217ENST00000548420 NOTOA8MTQ0 251 aa10.97□□□□□ -0.65
PTCH1-217ENST00000548420 RAB27BO00194 218 aa10.97□□□□□ -0.65
PTCH1-217ENST00000548420 HSD17B6O14756 317 aa10.97□□□□□ -0.65
PTCH1-217ENST00000548420 PRR18Q8N4B5 295 aa10.97□□□□□ -0.65
PTCH1-217ENST00000548420 OR52L2PQ8NGH6 319 aa10.97□□□□□ -0.65
PTCH1-217ENST00000548420 OR56B4Q8NH76 319 aa10.97□□□□□ -0.65
PTCH1-217ENST00000548420 RTN4IP1Q8WWV3 396 aaPredicted RBP10.97□□□□□ -0.65
PTCH1-217ENST00000548420 GALMQ96C23 342 aa10.97□□□□□ -0.65
PTCH1-217ENST00000548420 AKR1E2Q96JD6 320 aa10.97□□□□□ -0.65
PTCH1-217ENST00000548420 TM2D3Q9BRN9 247 aa10.97□□□□□ -0.65
PTCH1-217ENST00000548420 SLC25A33Q9BSK2 321 aa10.97□□□□□ -0.65
PTCH1-217ENST00000548420 OR2S2Q9NQN1 319 aa10.97□□□□□ -0.65
PTCH1-217ENST00000548420 A0A087WXM4 84 aa10.96□□□□□ -0.65
PTCH1-217ENST00000548420 A0A0B4J203 849 aa10.96□□□□□ -0.65
PTCH1-217ENST00000548420 TNFAIP8O95379 198 aa10.96□□□□□ -0.65
PTCH1-217ENST00000548420 SNRNP70P08621 437 aaKnown RBP10.96□□□□□ -0.65
PTCH1-217ENST00000548420 FRMD6-AS1P0C7T7 363 aa10.96□□□□□ -0.65
PTCH1-217ENST00000548420 CD36P16671 472 aa10.96□□□□□ -0.65
PTCH1-217ENST00000548420 GNMTQ14749 295 aa10.96□□□□□ -0.65
PTCH1-217ENST00000548420 NEDD8Q15843 81 aa10.96□□□□□ -0.65
PTCH1-217ENST00000548420 MOGAT2Q3SYC2 334 aa10.96□□□□□ -0.65
PTCH1-217ENST00000548420 MOB1BQ7L9L4 216 aa10.96□□□□□ -0.65
PTCH1-217ENST00000548420 ODF3L1Q8IXM7 274 aa10.96□□□□□ -0.65
PTCH1-217ENST00000548420 Q8N6K4 173 aa10.96□□□□□ -0.65
PTCH1-217ENST00000548420 OR10V1Q8NGI7 309 aa10.96□□□□□ -0.65
PTCH1-217ENST00000548420 CAPSLQ8WWF8 208 aa10.96□□□□□ -0.65
PTCH1-217ENST00000548420 HDHD3Q9BSH5 251 aaPredicted RBP10.96□□□□□ -0.65
PTCH1-217ENST00000548420 Q9N2K0 584 aa10.96□□□□□ -0.65
PTCH1-217ENST00000548420 SCOCQ9UIL1 159 aa10.96□□□□□ -0.65
PTCH1-217ENST00000548420 MGAT4AQ9UM21 535 aa10.96□□□□□ -0.65
PTCH1-217ENST00000548420 UBR4Q5T4S7 5183 aa10.96□□□□□ -0.66
PTCH1-217ENST00000548420 M0QZK8 103 aa10.95□□□□□ -0.66
PTCH1-217ENST00000548420 LANCL1O43813 399 aa10.95□□□□□ -0.66
PTCH1-217ENST00000548420 SLC2A2P11168 524 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-217ENST00000548420 GADD45AP24522 165 aa10.95□□□□□ -0.66
PTCH1-217ENST00000548420 IL3RAP26951 378 aa10.95□□□□□ -0.66
PTCH1-217ENST00000548420 CD1BP29016 333 aa10.95□□□□□ -0.66
PTCH1-217ENST00000548420 SDC2P34741 201 aa10.95□□□□□ -0.66
PTCH1-217ENST00000548420 PPP1CCP36873 323 aaKnown RBP10.95□□□□□ -0.66
PTCH1-217ENST00000548420 IZUMO1Q8IYV9 350 aa10.95□□□□□ -0.66
PTCH1-217ENST00000548420 TSPAN14Q8NG11 270 aa10.95□□□□□ -0.66
PTCH1-217ENST00000548420 OR10R2Q8NGX6 335 aa10.95□□□□□ -0.66
PTCH1-217ENST00000548420 KCTD7Q96MP8 289 aa10.95□□□□□ -0.66
PTCH1-217ENST00000548420 P2RX4Q99571 388 aa10.95□□□□□ -0.66
PTCH1-217ENST00000548420 C12orf4Q9NQ89 552 aa10.95□□□□□ -0.66
PTCH1-217ENST00000548420 PKHD1P08F94 4074 aa10.94□□□□□ -0.66
PTCH1-217ENST00000548420 MFNGO00587 321 aa10.94□□□□□ -0.66
PTCH1-217ENST00000548420 ITGB1BP1O14713 200 aa10.94□□□□□ -0.66
PTCH1-217ENST00000548420 FGF16O43320 207 aa10.94□□□□□ -0.66
PTCH1-217ENST00000548420 TXNL1O43396 289 aa10.94□□□□□ -0.66
PTCH1-217ENST00000548420 RGS11O94810 467 aa10.94□□□□□ -0.66
PTCH1-217ENST00000548420 REG1BP48304 166 aa10.94□□□□□ -0.66
PTCH1-217ENST00000548420 KHDC1LQ5JSQ8 128 aa10.94□□□□□ -0.66
PTCH1-217ENST00000548420 CENPVQ7Z7K6 275 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-217ENST00000548420 MOB3BQ86TA1 216 aa10.94□□□□□ -0.66
PTCH1-217ENST00000548420 RPP25LQ8N5L8 163 aaKnown RBP10.94□□□□□ -0.66
PTCH1-217ENST00000548420 RAB3CQ96E17 227 aa10.94□□□□□ -0.66
PTCH1-217ENST00000548420 YIPF6Q96EC8 236 aa10.94□□□□□ -0.66
PTCH1-217ENST00000548420 EAF1Q96JC9 268 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-217ENST00000548420 CMSS1Q9BQ75 279 aaKnown RBP10.94□□□□□ -0.66
PTCH1-217ENST00000548420 CHCHD6Q9BRQ6 235 aa10.94□□□□□ -0.66
PTCH1-217ENST00000548420 CENPOQ9BU64 300 aa10.94□□□□□ -0.66
PTCH1-217ENST00000548420 ABHD14AQ9BUJ0 271 aa10.94□□□□□ -0.66
PTCH1-217ENST00000548420 RNF167Q9H6Y7 350 aa10.94□□□□□ -0.66
PTCH1-217ENST00000548420 CHMP1AQ9HD42 196 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-217ENST00000548420 ABRACLQ9P1F3 81 aa10.94□□□□□ -0.66
PTCH1-217ENST00000548420 MOB4Q9Y3A3 225 aa10.94□□□□□ -0.66
PTCH1-217ENST00000548420 DYNC1H1Q14204 4646 aaKnown RBP10.94□□□□□ -0.66
PTCH1-217ENST00000548420 SMIM30A4D0T7 59 aa10.93□□□□□ -0.66
PTCH1-217ENST00000548420 METTL21EPA6NDL7 271 aa10.93□□□□□ -0.66
PTCH1-217ENST00000548420 IGKV1D-33P01593 117 aa10.93□□□□□ -0.66
PTCH1-217ENST00000548420 IGKV1-33P01594 117 aa10.93□□□□□ -0.66
PTCH1-217ENST00000548420 CLEC2LP0C7M8 214 aa10.93□□□□□ -0.66
PTCH1-217ENST00000548420 HIST1H1DP16402 221 aaKnown RBP10.93□□□□□ -0.66
PTCH1-217ENST00000548420 HLA-DRB3P79483 266 aa10.93□□□□□ -0.66
PTCH1-217ENST00000548420 ABCA11PQ4W5N1 156 aa10.93□□□□□ -0.66
PTCH1-217ENST00000548420 ARSJQ5FYB0 599 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-217ENST00000548420 SFXN4Q6P4A7 337 aa10.93□□□□□ -0.66
PTCH1-217ENST00000548420 TGIF2LXQ8IUE1 241 aa10.93□□□□□ -0.66
PTCH1-217ENST00000548420 C5orf56Q8N8D9 126 aa10.93□□□□□ -0.66
PTCH1-217ENST00000548420 AGMATQ9BSE5 352 aa10.93□□□□□ -0.66
PTCH1-217ENST00000548420 TOLLIPQ9H0E2 274 aa10.93□□□□□ -0.66
PTCH1-217ENST00000548420 PLSCR3Q9NRY6 295 aa10.93□□□□□ -0.66
PTCH1-217ENST00000548420 IGHV3-72A0A0B4J1Y9 119 aa10.92□□□□□ -0.66
PTCH1-217ENST00000548420 IGKV1-6A0A0C4DH72 117 aa10.92□□□□□ -0.66
PTCH1-217ENST00000548420 SERPINE3A8MV23 424 aa10.92□□□□□ -0.66
PTCH1-217ENST00000548420 ZNF736B4DX44 427 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms