RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 VCXQ9H320 206 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 METTL17Q9H7H0 456 aaPredicted RBP2.45□□□□□ -2.02
PTCH1-216ENST00000548379 PATZ1Q9HBE1 687 aaKnown RBP2.45□□□□□ -2.02
PTCH1-216ENST00000548379 DYNLRB1Q9NP97 96 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 UBQLN4Q9NRR5 601 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 CLN6Q9NWW5 311 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 DUX4Q9UBX2 424 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 CD300AQ9UGN4 299 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 ZNF229Q9UJW7 825 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 CES1P1Q9UKY3 287 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 ITPR3Q14573 2671 aa2.45□□□□□ -2.02
PTCH1-216ENST00000548379 ANKHD1Q8IWZ3 2542 aaKnown RBP2.45□□□□□ -2.02
PTCH1-216ENST00000548379 A0A096LNT2 108 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 IGHV3-15A0A0B4J1V0 119 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 GOLGA8QA0A0J9YX86 632 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 A0A1W2PQD3 144 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 A0A1W2PRF3 423 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 A0A1W2PRM7 423 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 FAM159BA6NKW6 160 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 H3BQF6 201 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 GOLGA8RI6L899 631 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 UPK1AO00322 258 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 RFXANKO14593 260 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 RAD51CO43502 376 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 ENTPD5O75356 428 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 ZNF324O75467 553 aaPredicted RBP2.44□□□□□ -2.02
PTCH1-216ENST00000548379 PIAS1O75925 651 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 WISP3O95389 354 aaPredicted RBP2.44□□□□□ -2.02
PTCH1-216ENST00000548379 OXTP01178 125 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 ARG1P05089 322 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 TACSTD2P09758 323 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 FKBP2P26885 142 aaKnown RBP2.44□□□□□ -2.02
PTCH1-216ENST00000548379 CEACAM3P40198 252 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 IDH3GP51553 393 aaPredicted RBP2.44□□□□□ -2.02
PTCH1-216ENST00000548379 P2RX1P51575 399 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 UBE2NP61088 152 aaKnown RBP2.44□□□□□ -2.02
PTCH1-216ENST00000548379 DEFA6Q01524 100 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 CAV1Q03135 178 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 FOXF1Q12946 379 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 PSG3Q16557 428 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 PLPPR5Q32ZL2 321 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 CLEC6AQ6EIG7 209 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 C3orf33Q6P1S2 294 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 PLET1Q6UQ28 207 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 CASP12Q6UXS9 341 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 OR2W3Q7Z3T1 314 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 CYB561D1Q8N8Q1 229 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 COX18Q8N8Q8 333 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 C11orf72Q8NBR9 251 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 OR51F2Q8NH61 342 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 OR5W2Q8NH69 310 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 ANGPTL6Q8NI99 470 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 PIGXQ8TBF5 258 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 C16orf78Q8WTQ4 265 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 DCAKDQ8WVC6 231 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 TMEM234Q8WY98 164 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 HBEGFQ99075 208 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 SUCNR1Q9BXA5 334 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 C1QTNF6Q9BXI9 259 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 EBPLQ9BY08 206 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 BPESC1Q9GZL8 116 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 TMEM38AQ9H6F2 299 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 C12orf10Q9HB07 376 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 PCTPQ9UKL6 214 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 SNX12Q9UMY4 172 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 SNX24Q9Y343 169 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 UTP11Q9Y3A2 253 aaKnown RBP2.44□□□□□ -2.02
PTCH1-216ENST00000548379 CACNA1DQ01668 2161 aa2.44□□□□□ -2.02
PTCH1-216ENST00000548379 HIVEP3Q5T1R4 2406 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 NIPBLQ6KC79 2804 aaeCLIP2.43□□□□□ -2.02
PTCH1-216ENST00000548379 NAV3Q8IVL0 2385 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 A0A0U1RQV1 116 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 C17orf51A8MQB3 221 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 ATP6V1G2-DDX39BF2Z307 99 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 MANBAO00462 879 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 EIF1BO60739 113 aaKnown RBP2.43□□□□□ -2.02
PTCH1-216ENST00000548379 E2F6O75461 281 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 LY6HO94772 140 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 KCNK2O95069 426 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 CD3GP09693 182 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 IFI6P09912 130 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 OR4A8P0C604 315 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 IVDP26440 423 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 SERPINB9P50453 376 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 NAA20P61599 178 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 ZNF117Q03924 483 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 AVPI1Q5T686 147 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 TMPRSS11AQ6ZMR5 421 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 TMPPEQ6ZT21 453 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 MBOAT2Q6ZWT7 520 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 LRRC8AQ8IWT6 810 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 PGAM4Q8N0Y7 254 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 SYS1Q8N2H4 156 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 SLC35F6Q8N357 371 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 OR52E2Q8NGJ4 325 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 ZNF563Q8TA94 476 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 UBALD1Q8TB05 177 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 C15orf40Q8WUR7 153 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 BAALCQ8WXS3 180 aa2.43□□□□□ -2.02
PTCH1-216ENST00000548379 TMEM230Q96A57 120 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms