RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 HIST1H1DP16402 221 aaKnown RBP11.68□□□□□ -0.54
CCDC38-205ENST00000546947 CEACAM6P40199 344 aa11.68□□□□□ -0.54
CCDC38-205ENST00000546947 F2RL1P55085 397 aa11.68□□□□□ -0.54
CCDC38-205ENST00000546947 DEFA6Q01524 100 aa11.68□□□□□ -0.54
CCDC38-205ENST00000546947 TCTEX1D4Q5JR98 221 aa11.68□□□□□ -0.54
CCDC38-205ENST00000546947 C10orf99Q6UWK7 81 aa11.68□□□□□ -0.54
CCDC38-205ENST00000546947 FAM71E2Q8N5Q1 922 aa11.68□□□□□ -0.54
CCDC38-205ENST00000546947 OR4A4PQ8NGN8 299 aa11.68□□□□□ -0.54
CCDC38-205ENST00000546947 OR1A1Q9P1Q5 309 aa11.68□□□□□ -0.54
CCDC38-205ENST00000546947 AP4M1O00189 453 aa11.67□□□□□ -0.54
CCDC38-205ENST00000546947 FCGR3AP08637 254 aa11.67□□□□□ -0.54
CCDC38-205ENST00000546947 GNB3P16520 340 aa11.67□□□□□ -0.54
CCDC38-205ENST00000546947 CD36P16671 472 aa11.67□□□□□ -0.54
CCDC38-205ENST00000546947 GPR12P47775 334 aa11.67□□□□□ -0.54
CCDC38-205ENST00000546947 OR3A3P47888 321 aa11.67□□□□□ -0.54
CCDC38-205ENST00000546947 SERPINB10P48595 397 aa11.67□□□□□ -0.54
CCDC38-205ENST00000546947 SLC35B1P78383 322 aa11.67□□□□□ -0.54
CCDC38-205ENST00000546947 KIR2DS1Q14954 304 aa11.67□□□□□ -0.54
CCDC38-205ENST00000546947 STPG2Q8N412 459 aa11.67□□□□□ -0.54
CCDC38-205ENST00000546947 COMMD1Q8N668 190 aa11.67□□□□□ -0.54
CCDC38-205ENST00000546947 PHF21AQ96BD5 680 aa11.67□□□□□ -0.54
CCDC38-205ENST00000546947 NOL4LQ96MY1 436 aaPredicted RBP11.67□□□□□ -0.54
CCDC38-205ENST00000546947 ZNF251Q9BRH9 671 aa11.67□□□□□ -0.54
CCDC38-205ENST00000546947 CHCHD6Q9BRQ6 235 aa11.67□□□□□ -0.54
CCDC38-205ENST00000546947 TOLLIPQ9H0E2 274 aa11.67□□□□□ -0.54
CCDC38-205ENST00000546947 ATG5Q9H1Y0 275 aa11.67□□□□□ -0.54
CCDC38-205ENST00000546947 MEGF8Q7Z7M0 2845 aa11.66□□□□□ -0.54
CCDC38-205ENST00000546947 IGKV1-6A0A0C4DH72 117 aa11.66□□□□□ -0.54
CCDC38-205ENST00000546947 A0A1W2PRX2 142 aa11.66□□□□□ -0.54
CCDC38-205ENST00000546947 FABP7O15540 132 aa11.66□□□□□ -0.54
CCDC38-205ENST00000546947 WIPF1O43516 503 aa11.66□□□□□ -0.54
CCDC38-205ENST00000546947 SCGNO76038 276 aa11.66□□□□□ -0.54
CCDC38-205ENST00000546947 TNFAIP8O95379 198 aa11.66□□□□□ -0.54
CCDC38-205ENST00000546947 DIRAS3O95661 229 aa11.66□□□□□ -0.54
CCDC38-205ENST00000546947 SDC2P34741 201 aa11.66□□□□□ -0.54
CCDC38-205ENST00000546947 ACTBP60709 375 aa11.66□□□□□ -0.54
CCDC38-205ENST00000546947 MMDQ15546 238 aa11.66□□□□□ -0.54
CCDC38-205ENST00000546947 SRSF7Q16629 238 aaKnown RBP eCLIP11.66□□□□□ -0.54
CCDC38-205ENST00000546947 SFXN4Q6P4A7 337 aa11.66□□□□□ -0.54
CCDC38-205ENST00000546947 ZNF329Q86UD4 541 aa11.66□□□□□ -0.54
CCDC38-205ENST00000546947 AGMATQ9BSE5 352 aa11.66□□□□□ -0.54
CCDC38-205ENST00000546947 CABLES2Q9BTV7 478 aa11.66□□□□□ -0.54
CCDC38-205ENST00000546947 CENPOQ9BU64 300 aa11.66□□□□□ -0.54
CCDC38-205ENST00000546947 GON7Q9BXV9 100 aa11.66□□□□□ -0.54
CCDC38-205ENST00000546947 PARP12Q9H0J9 701 aaKnown RBP11.66□□□□□ -0.54
CCDC38-205ENST00000546947 C11orf54Q9H0W9 315 aaPredicted RBP11.66□□□□□ -0.54
CCDC38-205ENST00000546947 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.66□□□□□ -0.54
CCDC38-205ENST00000546947 DAPK2Q9UIK4 370 aa11.66□□□□□ -0.54
CCDC38-205ENST00000546947 LINC00527Q9UJ94 153 aa11.66□□□□□ -0.54
CCDC38-205ENST00000546947 A0A075B6Q4 140 aa11.65□□□□□ -0.54
CCDC38-205ENST00000546947 A0A087WXM4 84 aa11.65□□□□□ -0.54
CCDC38-205ENST00000546947 LOC100506127A0A0U1RQW1 187 aa11.65□□□□□ -0.54
CCDC38-205ENST00000546947 LINC01548A6NM66 108 aa11.65□□□□□ -0.54
CCDC38-205ENST00000546947 RRP9O43818 475 aaKnown RBP11.65□□□□□ -0.54
CCDC38-205ENST00000546947 PF4V1P10720 104 aa11.65□□□□□ -0.54
CCDC38-205ENST00000546947 MC5RP33032 325 aa11.65□□□□□ -0.54
CCDC38-205ENST00000546947 SOX6P35712 828 aa11.65□□□□□ -0.54
CCDC38-205ENST00000546947 SCAND1P57086 179 aa11.65□□□□□ -0.54
CCDC38-205ENST00000546947 ARFRP1Q13795 201 aa11.65□□□□□ -0.54
CCDC38-205ENST00000546947 TIMM50Q3ZCQ8 353 aa11.65□□□□□ -0.54
CCDC38-205ENST00000546947 RPL39P5Q59GN2 51 aa11.65□□□□□ -0.54
CCDC38-205ENST00000546947 KHDC1LQ5JSQ8 128 aa11.65□□□□□ -0.54
CCDC38-205ENST00000546947 ABHD14BQ96IU4 210 aa11.65□□□□□ -0.54
CCDC38-205ENST00000546947 VCX3AQ9NNX9 186 aa11.65□□□□□ -0.54
CCDC38-205ENST00000546947 ZFP57Q9NU63 452 aa11.65□□□□□ -0.54
CCDC38-205ENST00000546947 RDH8Q9NYR8 311 aa11.65□□□□□ -0.54
CCDC38-205ENST00000546947 ZNF221Q9UK13 617 aa11.65□□□□□ -0.54
CCDC38-205ENST00000546947 DNAH3Q8TD57 4116 aa11.64□□□□□ -0.55
CCDC38-205ENST00000546947 OR5H14A6NHG9 310 aa11.64□□□□□ -0.55
CCDC38-205ENST00000546947 NBR2O15453 112 aa11.64□□□□□ -0.55
CCDC38-205ENST00000546947 NDUFA3O95167 84 aa11.64□□□□□ -0.55
CCDC38-205ENST00000546947 GSTT2P0CG29 244 aa11.64□□□□□ -0.55
CCDC38-205ENST00000546947 GSTT2BP0CG30 244 aa11.64□□□□□ -0.55
CCDC38-205ENST00000546947 CT45A6P0DMU7 189 aa11.64□□□□□ -0.55
CCDC38-205ENST00000546947 CT45A5P0DMU8 189 aa11.64□□□□□ -0.55
CCDC38-205ENST00000546947 CT45A7P0DMV0 189 aa11.64□□□□□ -0.55
CCDC38-205ENST00000546947 SNRPBP14678 240 aaKnown RBP11.64□□□□□ -0.55
CCDC38-205ENST00000546947 DTYMKP23919 212 aa11.64□□□□□ -0.55
CCDC38-205ENST00000546947 TALDO1P37837 337 aa11.64□□□□□ -0.55
CCDC38-205ENST00000546947 MXD1Q05195 221 aa11.64□□□□□ -0.55
CCDC38-205ENST00000546947 SAMD5Q5TGI4 173 aa11.64□□□□□ -0.55
CCDC38-205ENST00000546947 FAM131AQ6UXB0 335 aa11.64□□□□□ -0.55
CCDC38-205ENST00000546947 Q6ZS49 121 aa11.64□□□□□ -0.55
CCDC38-205ENST00000546947 TSPAN14Q8NG11 270 aa11.64□□□□□ -0.55
CCDC38-205ENST00000546947 NPBQ8NG41 125 aa11.64□□□□□ -0.55
CCDC38-205ENST00000546947 OR10J5Q8NHC4 309 aa11.64□□□□□ -0.55
CCDC38-205ENST00000546947 RBMXL1Q96E39 390 aaKnown RBP11.64□□□□□ -0.55
CCDC38-205ENST00000546947 HSPB9Q9BQS6 159 aa11.64□□□□□ -0.55
CCDC38-205ENST00000546947 RNF167Q9H6Y7 350 aa11.64□□□□□ -0.55
CCDC38-205ENST00000546947 KIAA1456Q9P272 454 aa11.64□□□□□ -0.55
CCDC38-205ENST00000546947 ZNF107Q9UII5 783 aaPredicted RBP11.64□□□□□ -0.55
CCDC38-205ENST00000546947 ZNF580Q9UK33 172 aa11.64□□□□□ -0.55
CCDC38-205ENST00000546947 TRBV6-7A0A0A0MS04 114 aa11.63□□□□□ -0.55
CCDC38-205ENST00000546947 G3V4G9 280 aa11.63□□□□□ -0.55
CCDC38-205ENST00000546947 H0YJW9 148 aa11.63□□□□□ -0.55
CCDC38-205ENST00000546947 BET1O15155 118 aa11.63□□□□□ -0.55
CCDC38-205ENST00000546947 TMEM127O75204 238 aa11.63□□□□□ -0.55
CCDC38-205ENST00000546947 HLA-DRB1P01911 266 aa11.63□□□□□ -0.55
CCDC38-205ENST00000546947 PF4P02776 101 aa11.63□□□□□ -0.55
CCDC38-205ENST00000546947 GSTP1P09211 210 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms