RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 MRPL20Q9BYC9 149 aaKnown RBP12.59□□□□□ -0.39
DDX54-204ENST00000546898 ABCG5Q9H222 651 aa12.59□□□□□ -0.39
DDX54-204ENST00000546898 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.59□□□□□ -0.39
DDX54-204ENST00000546898 LOC100506127A0A0U1RQW1 187 aa12.58□□□□□ -0.4
DDX54-204ENST00000546898 PSMB11A5LHX3 300 aa12.58□□□□□ -0.4
DDX54-204ENST00000546898 ADARB2-AS1A8MUL3 147 aa12.58□□□□□ -0.4
DDX54-204ENST00000546898 FCGR3AP08637 254 aa12.58□□□□□ -0.4
DDX54-204ENST00000546898 SCTP09683 121 aa12.58□□□□□ -0.4
DDX54-204ENST00000546898 GNB3P16520 340 aa12.58□□□□□ -0.4
DDX54-204ENST00000546898 SDC2P34741 201 aa12.58□□□□□ -0.4
DDX54-204ENST00000546898 CEACAM6P40199 344 aa12.58□□□□□ -0.4
DDX54-204ENST00000546898 OR3A3P47888 321 aa12.58□□□□□ -0.4
DDX54-204ENST00000546898 SERPINB10P48595 397 aa12.58□□□□□ -0.4
DDX54-204ENST00000546898 SCAND1P57086 179 aa12.58□□□□□ -0.4
DDX54-204ENST00000546898 FAM71E2Q8N5Q1 922 aa12.58□□□□□ -0.4
DDX54-204ENST00000546898 TSPAN14Q8NG11 270 aa12.58□□□□□ -0.4
DDX54-204ENST00000546898 RASL11BQ9BPW5 248 aa12.58□□□□□ -0.4
DDX54-204ENST00000546898 CENPOQ9BU64 300 aa12.58□□□□□ -0.4
DDX54-204ENST00000546898 TOLLIPQ9H0E2 274 aa12.58□□□□□ -0.4
DDX54-204ENST00000546898 ATG5Q9H1Y0 275 aa12.58□□□□□ -0.4
DDX54-204ENST00000546898 PLSCR3Q9NRY6 295 aa12.58□□□□□ -0.4
DDX54-204ENST00000546898 OR1A1Q9P1Q5 309 aa12.58□□□□□ -0.4
DDX54-204ENST00000546898 DAPK2Q9UIK4 370 aa12.58□□□□□ -0.4
DDX54-204ENST00000546898 TSSC4Q9Y5U2 329 aaPredicted RBP12.58□□□□□ -0.4
DDX54-204ENST00000546898 A0A075B6Q4 140 aa12.57□□□□□ -0.4
DDX54-204ENST00000546898 AP4M1O00189 453 aa12.57□□□□□ -0.4
DDX54-204ENST00000546898 FABP7O15540 132 aa12.57□□□□□ -0.4
DDX54-204ENST00000546898 TMEM127O75204 238 aa12.57□□□□□ -0.4
DDX54-204ENST00000546898 GPR12P47775 334 aa12.57□□□□□ -0.4
DDX54-204ENST00000546898 SRSF7Q16629 238 aaKnown RBP eCLIP12.57□□□□□ -0.4
DDX54-204ENST00000546898 LGALS14Q8TCE9 139 aa12.57□□□□□ -0.4
DDX54-204ENST00000546898 R3HDM4Q96D70 268 aa12.57□□□□□ -0.4
DDX54-204ENST00000546898 ZNF251Q9BRH9 671 aa12.57□□□□□ -0.4
DDX54-204ENST00000546898 AGMATQ9BSE5 352 aa12.57□□□□□ -0.4
DDX54-204ENST00000546898 CABLES2Q9BTV7 478 aa12.57□□□□□ -0.4
DDX54-204ENST00000546898 C11orf54Q9H0W9 315 aaPredicted RBP12.57□□□□□ -0.4
DDX54-204ENST00000546898 IGKV1-6A0A0C4DH72 117 aa12.56□□□□□ -0.4
DDX54-204ENST00000546898 TCRBV4S1A1TA0A5B7 111 aa12.56□□□□□ -0.4
DDX54-204ENST00000546898 OR5H14A6NHG9 310 aa12.56□□□□□ -0.4
DDX54-204ENST00000546898 TALDO1P37837 337 aa12.56□□□□□ -0.4
DDX54-204ENST00000546898 SLC35B1P78383 322 aa12.56□□□□□ -0.4
DDX54-204ENST00000546898 MXD1Q05195 221 aa12.56□□□□□ -0.4
DDX54-204ENST00000546898 ARFRP1Q13795 201 aa12.56□□□□□ -0.4
DDX54-204ENST00000546898 MMDQ15546 238 aa12.56□□□□□ -0.4
DDX54-204ENST00000546898 TCTEX1D4Q5JR98 221 aa12.56□□□□□ -0.4
DDX54-204ENST00000546898 Q6ZS49 121 aa12.56□□□□□ -0.4
DDX54-204ENST00000546898 STPG2Q8N412 459 aa12.56□□□□□ -0.4
DDX54-204ENST00000546898 COMMD1Q8N668 190 aa12.56□□□□□ -0.4
DDX54-204ENST00000546898 PHF21AQ96BD5 680 aa12.56□□□□□ -0.4
DDX54-204ENST00000546898 GON7Q9BXV9 100 aa12.56□□□□□ -0.4
DDX54-204ENST00000546898 PARP12Q9H0J9 701 aaKnown RBP12.56□□□□□ -0.4
DDX54-204ENST00000546898 RDH8Q9NYR8 311 aa12.56□□□□□ -0.4
DDX54-204ENST00000546898 ETV7Q9Y603 341 aa12.56□□□□□ -0.4
DDX54-204ENST00000546898 RRP9O43818 475 aaKnown RBP12.55□□□□□ -0.4
DDX54-204ENST00000546898 GSTP1P09211 210 aaKnown RBP12.55□□□□□ -0.4
DDX54-204ENST00000546898 SNRPBP14678 240 aaKnown RBP12.55□□□□□ -0.4
DDX54-204ENST00000546898 DTYMKP23919 212 aa12.55□□□□□ -0.4
DDX54-204ENST00000546898 MC5RP33032 325 aa12.55□□□□□ -0.4
DDX54-204ENST00000546898 SOX6P35712 828 aa12.55□□□□□ -0.4
DDX54-204ENST00000546898 F2RL1P55085 397 aa12.55□□□□□ -0.4
DDX54-204ENST00000546898 ACTBP60709 375 aa12.55□□□□□ -0.4
DDX54-204ENST00000546898 RPL39P5Q59GN2 51 aa12.55□□□□□ -0.4
DDX54-204ENST00000546898 C10orf99Q6UWK7 81 aa12.55□□□□□ -0.4
DDX54-204ENST00000546898 ABHD14BQ96IU4 210 aa12.55□□□□□ -0.4
DDX54-204ENST00000546898 NOL4LQ96MY1 436 aaPredicted RBP12.55□□□□□ -0.4
DDX54-204ENST00000546898 RNF167Q9H6Y7 350 aa12.55□□□□□ -0.4
DDX54-204ENST00000546898 RHBDL2Q9NX52 303 aa12.55□□□□□ -0.4
DDX54-204ENST00000546898 ZNF580Q9UK33 172 aa12.55□□□□□ -0.4
DDX54-204ENST00000546898 TRBV6-7A0A0A0MS04 114 aa12.54□□□□□ -0.4
DDX54-204ENST00000546898 NBR2O15453 112 aa12.54□□□□□ -0.4
DDX54-204ENST00000546898 CLEC2LP0C7M8 214 aa12.54□□□□□ -0.4
DDX54-204ENST00000546898 CT45A6P0DMU7 189 aa12.54□□□□□ -0.4
DDX54-204ENST00000546898 CT45A5P0DMU8 189 aa12.54□□□□□ -0.4
DDX54-204ENST00000546898 CT45A7P0DMV0 189 aa12.54□□□□□ -0.4
DDX54-204ENST00000546898 PITPNAQ00169 270 aa12.54□□□□□ -0.4
DDX54-204ENST00000546898 CDNFQ49AH0 187 aa12.54□□□□□ -0.4
DDX54-204ENST00000546898 FAM131AQ6UXB0 335 aa12.54□□□□□ -0.4
DDX54-204ENST00000546898 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.54□□□□□ -0.4
DDX54-204ENST00000546898 OR10J5Q8NHC4 309 aa12.54□□□□□ -0.4
DDX54-204ENST00000546898 YIPF6Q96EC8 236 aa12.54□□□□□ -0.4
DDX54-204ENST00000546898 ZNF221Q9UK13 617 aa12.54□□□□□ -0.4
DDX54-204ENST00000546898 NOTCH3Q9UM47 2321 aa12.53□□□□□ -0.4
DDX54-204ENST00000546898 A0A1W2PRX2 142 aa12.53□□□□□ -0.4
DDX54-204ENST00000546898 TRIM64CA6NLI5 447 aa12.53□□□□□ -0.4
DDX54-204ENST00000546898 H0YJW9 148 aa12.53□□□□□ -0.4
DDX54-204ENST00000546898 BET1O15155 118 aa12.53□□□□□ -0.4
DDX54-204ENST00000546898 AIREO43918 545 aa12.53□□□□□ -0.4
DDX54-204ENST00000546898 RBBP9O75884 186 aa12.53□□□□□ -0.4
DDX54-204ENST00000546898 NDUFA3O95167 84 aa12.53□□□□□ -0.4
DDX54-204ENST00000546898 HLA-DRB1P01911 266 aa12.53□□□□□ -0.4
DDX54-204ENST00000546898 GSTT2P0CG29 244 aa12.53□□□□□ -0.4
DDX54-204ENST00000546898 GSTT2BP0CG30 244 aa12.53□□□□□ -0.4
DDX54-204ENST00000546898 PF4V1P10720 104 aa12.53□□□□□ -0.4
DDX54-204ENST00000546898 PNLIPRP3Q17RR3 467 aa12.53□□□□□ -0.4
DDX54-204ENST00000546898 IGSF11Q5DX21 431 aa12.53□□□□□ -0.4
DDX54-204ENST00000546898 KHDC1LQ5JSQ8 128 aa12.53□□□□□ -0.4
DDX54-204ENST00000546898 HACD4Q5VWC8 232 aa12.53□□□□□ -0.4
DDX54-204ENST00000546898 ZNF329Q86UD4 541 aa12.53□□□□□ -0.4
DDX54-204ENST00000546898 CROCCP3Q8IVE0 287 aa12.53□□□□□ -0.4
DDX54-204ENST00000546898 NPBQ8NG41 125 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms