RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	AADAC	P22760	399 aa		8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	FAU	P35544	74 aa	Known RBP	8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	REG1B	P48304	166 aa		8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	ARHGDIB	P52566	201 aa		8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	PPP5C	P53041	499 aa		8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	LSAMP	Q13449	338 aa		8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	MEF2D	Q14814	521 aa		8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	BAK1	Q16611	211 aa		8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	DEFB112	Q30KQ8	113 aa		8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	SCGB2B2	Q4G0G5	96 aa		8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	LY6G6F	Q5SQ64	297 aa		8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	VAX1	Q5SQQ9	334 aa		8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	TPTE2P1	Q5T6R2	138 aa		8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	ZNF439	Q8NDP4	499 aa		8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	SECTM1	Q8WVN6	248 aa		8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	GIMAP1	Q8WWP7	306 aa		8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	TOMM40L	Q969M1	308 aa		8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	MALSU1	Q96EH3	234 aa		8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	S1PR3	Q99500	378 aa		8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	TSC22D3	Q99576	134 aa		8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	SLC6A7	Q99884	636 aa		8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	TOLLIP	Q9H0E2	274 aa		8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	OR2D2	Q9H210	308 aa		8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	ABCB10	Q9NRK6	738 aa		8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	PIPOX	Q9P0Z9	390 aa		8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	SON	P18583	2426 aa	Known RBP	8.24	□□□□□ -1.09
CPSF7-221	ENST00000543545	ZAN	Q9Y493	2812 aa		8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	MDFIC2	A0A1B0GVS7	189 aa		8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	ANKRD20A5P	A0PJZ0	165 aa		8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	HSD17B6	O14756	317 aa		8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	PPY	P01298	95 aa		8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	CD74	P04233	296 aa		8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	GAPDH	P04406	335 aa	Known RBP	8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	IL7	P13232	177 aa		8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	PGAM2	P15259	253 aa		8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	PAX6	P26367	422 aa		8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	CD40LG	P29965	261 aa		8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	CCDC144NL	Q6NUI1	221 aa		8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	FAAP20	Q6NZ36	180 aa		8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	DHRS11	Q6UWP2	260 aa		8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	MOB3B	Q86TA1	216 aa		8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	TGIF2LX	Q8IUE1	241 aa		8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	OR4D10	Q8NGI6	311 aa		8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	OR4C16	Q8NGL9	310 aa		8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	OR56B4	Q8NH76	319 aa		8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	TRIM63	Q969Q1	353 aa		8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	SDHC	Q99643	169 aa	Predicted RBP	8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	CCDC32	Q9BV29	185 aa		8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	SLC5A7	Q9GZV3	580 aa		8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	IFI27L2	Q9H2X8	130 aa		8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	GHITM	Q9H3K2	345 aa		8.23	□□□□□ -1.09
CPSF7-221	ENST00000543545	CELSR1	Q9NYQ6	3014 aa		8.22	□□□□□ -1.09
CPSF7-221	ENST00000543545	ANK3	Q12955	4377 aa	Known RBP	8.22	□□□□□ -1.09
CPSF7-221	ENST00000543545	CENPX	A8MT69	81 aa		8.22	□□□□□ -1.09
CPSF7-221	ENST00000543545		M0R1X1	148 aa		8.22	□□□□□ -1.09
CPSF7-221	ENST00000543545	TUSC2	O75896	110 aa		8.22	□□□□□ -1.09
CPSF7-221	ENST00000543545	FAM157C	P0CG43	387 aa		8.22	□□□□□ -1.09
CPSF7-221	ENST00000543545	BRS3	P32247	399 aa		8.22	□□□□□ -1.09
CPSF7-221	ENST00000543545	KLF9	Q13886	244 aa	Predicted RBP	8.22	□□□□□ -1.09
CPSF7-221	ENST00000543545	DIAPH2-AS1	Q14236	149 aa		8.22	□□□□□ -1.09
CPSF7-221	ENST00000543545	RPL39P5	Q59GN2	51 aa		8.22	□□□□□ -1.09
CPSF7-221	ENST00000543545	LDLRAD2	Q5SZI1	272 aa		8.22	□□□□□ -1.09
CPSF7-221	ENST00000543545	C9orf139	Q6ZV77	190 aa		8.22	□□□□□ -1.09
CPSF7-221	ENST00000543545	ARRDC1	Q8N5I2	433 aa		8.22	□□□□□ -1.09
CPSF7-221	ENST00000543545	SIGLECL1	Q8N7X8	197 aa		8.22	□□□□□ -1.09
CPSF7-221	ENST00000543545	ZNF418	Q8TF45	676 aa	Predicted RBP	8.22	□□□□□ -1.09
CPSF7-221	ENST00000543545	AGMAT	Q9BSE5	352 aa		8.22	□□□□□ -1.09
CPSF7-221	ENST00000543545	HRASLS	Q9HDD0	168 aa		8.22	□□□□□ -1.09
CPSF7-221	ENST00000543545	TNFRSF19	Q9NS68	423 aa		8.22	□□□□□ -1.09
CPSF7-221	ENST00000543545	SCP2D1	Q9UJQ7	156 aa		8.22	□□□□□ -1.09
CPSF7-221	ENST00000543545	YLPM1	P49750	1951 aa	Known RBP	8.21	□□□□□ -1.09
CPSF7-221	ENST00000543545	SAA2-SAA4	A0A096LPE2	208 aa		8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	IGKV1D-13	A0A0B4J2D9	117 aa		8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	BTBD17	A6NE02	478 aa		8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	OOSP1	A8MZH6	123 aa		8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	LY6L	H3BQJ8	138 aa		8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	SLC22A5	O76082	557 aa		8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	SAA2	P0DJI9	122 aa	Predicted RBP	8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	IGKV1-13	P0DP09	117 aa		8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	RAB13	P51153	203 aa		8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	BAMBI	Q13145	260 aa		8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	LPCAT3	Q6P1A2	487 aa		8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	C16orf87	Q6PH81	154 aa		8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	DYNAP	Q8N1N2	210 aa		8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	DRAM1	Q8N682	238 aa		8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	ZNF645	Q8N7E2	425 aa		8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	OR51S1	Q8NGJ8	323 aa		8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	TERB2	Q8NHR7	220 aa		8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	FAM216A	Q8WUB2	273 aa		8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	CAPSL	Q8WWF8	208 aa		8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	MOB3A	Q96BX8	217 aa		8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	AJUBA	Q96IF1	538 aa		8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	SSX3	Q99909	188 aa		8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	PRRT1	Q99946	306 aa		8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	CCL28	Q9NRJ3	127 aa		8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	SDHAF2	Q9NX18	166 aa		8.21	□□□□□ -1.1
CPSF7-221	ENST00000543545	MTOR	P42345	2549 aa		8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	IGHV3-72	A0A0B4J1Y9	119 aa		8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	IGHV1-3	A0A0C4DH29	117 aa		8.2	□□□□□ -1.1
CPSF7-221	ENST00000543545	OR5H14	A6NHG9	310 aa		8.2	□□□□□ -1.1

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms