RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 C1orf229Q6ZS94 237 aaPredicted RBP10.87□□□□□ -0.67
CHFR-221ENST00000542714 KCTD9Q7L273 389 aa10.87□□□□□ -0.67
CHFR-221ENST00000542714 TCTE3Q8IZS6 198 aa10.87□□□□□ -0.67
CHFR-221ENST00000542714 COQ8AQ8NI60 647 aa10.87□□□□□ -0.67
CHFR-221ENST00000542714 LHFPL5Q8TAF8 219 aa10.87□□□□□ -0.67
CHFR-221ENST00000542714 GLYATL2Q8WU03 294 aa10.87□□□□□ -0.67
CHFR-221ENST00000542714 MSI2Q96DH6 328 aaKnown RBP10.87□□□□□ -0.67
CHFR-221ENST00000542714 DMRTB1Q96MA1 342 aa10.87□□□□□ -0.67
CHFR-221ENST00000542714 PIMREGQ9BSJ6 248 aa10.87□□□□□ -0.67
CHFR-221ENST00000542714 ABHD14AQ9BUJ0 271 aa10.87□□□□□ -0.67
CHFR-221ENST00000542714 SUCNR1Q9BXA5 334 aa10.87□□□□□ -0.67
CHFR-221ENST00000542714 ZNF436Q9C0F3 470 aaPredicted RBP10.87□□□□□ -0.67
CHFR-221ENST00000542714 SDHAF2Q9NX18 166 aa10.87□□□□□ -0.67
CHFR-221ENST00000542714 ARID1AO14497 2285 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 LOC105371242A0A075B767 164 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 IGHV4-30-2A0A087WSY4 118 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 A0A087X0M5 115 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 A0A1B0GX30 115 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 A8MXK9 166 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 H0Y980 276 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 SMLR1H3BR10 107 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 NDUFS8O00217 210 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 OR2A4O95047 310 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 IGHV1-8P0DP01 117 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 F2RP25116 425 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 GNG10P50151 68 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 H2BFSP57053 126 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 RPL30P62888 115 aaKnown RBP10.86□□□□□ -0.67
CHFR-221ENST00000542714 PAX2Q02962 417 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 Q3ZCU0 254 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 ESCO2Q56NI9 601 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 BTNL3Q6UXE8 466 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 SLC25A48Q6ZT89 311 aaKnown RBP10.86□□□□□ -0.67
CHFR-221ENST00000542714 ODF3L1Q8IXM7 274 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 CMTM1Q8IZ96 169 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 ZBTB34Q8NCN2 500 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 OR5M8Q8NGP6 311 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 OR2A7Q96R45 310 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 ZNRD1Q9P1U0 126 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 KCNIP3Q9Y2W7 256 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 FBN2P35556 2912 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 ABCA2Q9BZC7 2435 aa10.86□□□□□ -0.67
CHFR-221ENST00000542714 IGHV4-61A0A0C4DH41 118 aa10.85□□□□□ -0.67
CHFR-221ENST00000542714 G3V3Q6 166 aa10.85□□□□□ -0.67
CHFR-221ENST00000542714 ADAP1O75689 374 aa10.85□□□□□ -0.67
CHFR-221ENST00000542714 RBP4P02753 201 aa10.85□□□□□ -0.67
CHFR-221ENST00000542714 LIPFP07098 398 aa10.85□□□□□ -0.67
CHFR-221ENST00000542714 GIPP09681 153 aaPredicted RBP10.85□□□□□ -0.67
CHFR-221ENST00000542714 ANXA3P12429 323 aa10.85□□□□□ -0.67
CHFR-221ENST00000542714 UCP1P25874 307 aa10.85□□□□□ -0.67
CHFR-221ENST00000542714 GPR12P47775 334 aa10.85□□□□□ -0.67
CHFR-221ENST00000542714 RAB7AP51149 207 aa10.85□□□□□ -0.67
CHFR-221ENST00000542714 DLX1P56177 255 aa10.85□□□□□ -0.67
CHFR-221ENST00000542714 SRSF4Q08170 494 aaKnown RBP10.85□□□□□ -0.67
CHFR-221ENST00000542714 C11orf91Q3C1V1 193 aa10.85□□□□□ -0.67
CHFR-221ENST00000542714 RPL39P5Q59GN2 51 aa10.85□□□□□ -0.67
CHFR-221ENST00000542714 CLEC2AQ6UVW9 174 aa10.85□□□□□ -0.67
CHFR-221ENST00000542714 LIAT1Q6ZQX7 453 aa10.85□□□□□ -0.67
CHFR-221ENST00000542714 Q8N7P7 452 aa10.85□□□□□ -0.67
CHFR-221ENST00000542714 LRTM2Q8N967 370 aa10.85□□□□□ -0.67
CHFR-221ENST00000542714 OR51H1Q8NH63 302 aa10.85□□□□□ -0.67
CHFR-221ENST00000542714 ZNF596Q8TC21 504 aa10.85□□□□□ -0.67
CHFR-221ENST00000542714 C18orf12Q96KH6 178 aa10.85□□□□□ -0.67
CHFR-221ENST00000542714 ZNF251Q9BRH9 671 aa10.85□□□□□ -0.67
CHFR-221ENST00000542714 CHIAQ9BZP6 476 aa10.85□□□□□ -0.67
CHFR-221ENST00000542714 TMEM222Q9H0R3 208 aa10.85□□□□□ -0.67
CHFR-221ENST00000542714 GAB2Q9UQC2 676 aa10.85□□□□□ -0.67
CHFR-221ENST00000542714 SESN1Q9Y6P5 492 aa10.85□□□□□ -0.67
CHFR-221ENST00000542714 HNRNPCP07910 306 aaKnown RBP eCLIP10.84□□□□□ -0.67
CHFR-221ENST00000542714 BRWD1-AS2P59051 145 aa10.84□□□□□ -0.67
CHFR-221ENST00000542714 LINC00205P59089 165 aa10.84□□□□□ -0.67
CHFR-221ENST00000542714 C11orf88Q6PI97 169 aa10.84□□□□□ -0.67
CHFR-221ENST00000542714 LINC00311Q8N616 119 aa10.84□□□□□ -0.67
CHFR-221ENST00000542714 C8orf31Q8N9H6 132 aa10.84□□□□□ -0.67
CHFR-221ENST00000542714 TMEM56Q96MV1 263 aa10.84□□□□□ -0.67
CHFR-221ENST00000542714 RAB18Q9NP72 206 aa10.84□□□□□ -0.67
CHFR-221ENST00000542714 BEX4Q9NWD9 120 aaPredicted RBP10.84□□□□□ -0.67
CHFR-221ENST00000542714 ONECUT1Q9UBC0 465 aa10.84□□□□□ -0.67
CHFR-221ENST00000542714 TMEM56-RWDD3S4R434 201 aa10.84□□□□□ -0.67
CHFR-221ENST00000542714 SAA2-SAA4A0A096LPE2 208 aa10.83□□□□□ -0.68
CHFR-221ENST00000542714 A0A1W2PPH5 198 aa10.83□□□□□ -0.68
CHFR-221ENST00000542714 LINC00473A8K010 186 aa10.83□□□□□ -0.68
CHFR-221ENST00000542714 MPTX1A8MV57 137 aa10.83□□□□□ -0.68
CHFR-221ENST00000542714 FAM157AC9JC47 383 aa10.83□□□□□ -0.68
CHFR-221ENST00000542714 IGKV1-39P01597 117 aa10.83□□□□□ -0.68
CHFR-221ENST00000542714 IGKV1D-39P04432 117 aa10.83□□□□□ -0.68
CHFR-221ENST00000542714 HOXB5P09067 269 aa10.83□□□□□ -0.68
CHFR-221ENST00000542714 SAA2P0DJI9 122 aaPredicted RBP10.83□□□□□ -0.68
CHFR-221ENST00000542714 S100GP29377 79 aa10.83□□□□□ -0.68
CHFR-221ENST00000542714 LCN2P80188 198 aa10.83□□□□□ -0.68
CHFR-221ENST00000542714 PRB3Q04118 309 aaPredicted RBP10.83□□□□□ -0.68
CHFR-221ENST00000542714 ZNF585BQ52M93 769 aa10.83□□□□□ -0.68
CHFR-221ENST00000542714 Q5BKY6 102 aa10.83□□□□□ -0.68
CHFR-221ENST00000542714 ZNF66Q6ZN08 573 aa10.83□□□□□ -0.68
CHFR-221ENST00000542714 LYZL2Q7Z4W2 148 aa10.83□□□□□ -0.68
CHFR-221ENST00000542714 SELENOHQ8IZQ5 122 aaKnown RBP10.83□□□□□ -0.68
CHFR-221ENST00000542714 LGI3Q8N145 548 aa10.83□□□□□ -0.68
CHFR-221ENST00000542714 LYG1Q8N1E2 194 aa10.83□□□□□ -0.68
CHFR-221ENST00000542714 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.83□□□□□ -0.68
CHFR-221ENST00000542714 RAB39BQ96DA2 213 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms