RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 ANKRD20A5PA0PJZ0 165 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 J3QRK9 145 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 CRLF1O75462 422 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 RAB3DO95716 219 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 AKAIN1P0CW23 69 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 IL3RAP26951 378 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 CEACAM3P40198 252 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 PPP5CP53041 499 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 AP3S2P59780 193 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 LSAMPQ13449 338 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 SSX2Q16385 188 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 VAX1Q5SQQ9 334 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 LDLRAD2Q5SZI1 272 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 ZNF57Q68EA5 555 aaPredicted RBP9.4□□□□□ -0.9
YBX3-213ENST00000542641 DHRS11Q6UWP2 260 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 C9orf139Q6ZV77 190 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 TOMM5Q8N4H5 51 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 OR6F1Q8NGZ6 308 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 C17orf50Q8WW18 174 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 GIMAP1Q8WWP7 306 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 TRIM63Q969Q1 353 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 MALSU1Q96EH3 234 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 SDHCQ99643 169 aaPredicted RBP9.4□□□□□ -0.9
YBX3-213ENST00000542641 AGMATQ9BSE5 352 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 TINAGL1Q9GZM7 467 aaPredicted RBP9.4□□□□□ -0.9
YBX3-213ENST00000542641 GHITMQ9H3K2 345 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 RNF150Q9ULK6 438 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 OR2W1Q9Y3N9 320 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 HILPDAQ9Y5L2 63 aa9.4□□□□□ -0.9
YBX3-213ENST00000542641 LY6LH3BQJ8 138 aa9.39□□□□□ -0.91
YBX3-213ENST00000542641 RAB29O14966 203 aa9.39□□□□□ -0.91
YBX3-213ENST00000542641 TUSC2O75896 110 aa9.39□□□□□ -0.91
YBX3-213ENST00000542641 PPYP01298 95 aa9.39□□□□□ -0.91
YBX3-213ENST00000542641 CD74P04233 296 aa9.39□□□□□ -0.91
YBX3-213ENST00000542641 FBP1P09467 338 aa9.39□□□□□ -0.91
YBX3-213ENST00000542641 IL7P13232 177 aa9.39□□□□□ -0.91
YBX3-213ENST00000542641 AADACP22760 399 aa9.39□□□□□ -0.91
YBX3-213ENST00000542641 CD40LGP29965 261 aa9.39□□□□□ -0.91
YBX3-213ENST00000542641 GPR12P47775 334 aa9.39□□□□□ -0.91
YBX3-213ENST00000542641 LUMP51884 338 aaPredicted RBP9.39□□□□□ -0.91
YBX3-213ENST00000542641 HERV-K104P61576 105 aa9.39□□□□□ -0.91
YBX3-213ENST00000542641 MEF2DQ14814 521 aa9.39□□□□□ -0.91
YBX3-213ENST00000542641 DEFB112Q30KQ8 113 aa9.39□□□□□ -0.91
YBX3-213ENST00000542641 TPTE2P1Q5T6R2 138 aa9.39□□□□□ -0.91
YBX3-213ENST00000542641 TMEM17Q86X19 198 aa9.39□□□□□ -0.91
YBX3-213ENST00000542641 OR4D10Q8NGI6 311 aa9.39□□□□□ -0.91
YBX3-213ENST00000542641 FAM216AQ8WUB2 273 aa9.39□□□□□ -0.91
YBX3-213ENST00000542641 RPEQ96AT9 228 aa9.39□□□□□ -0.91
YBX3-213ENST00000542641 AJUBAQ96IF1 538 aa9.39□□□□□ -0.91
YBX3-213ENST00000542641 ABHD14BQ96IU4 210 aa9.39□□□□□ -0.91
YBX3-213ENST00000542641 ZNF2Q9BSG1 426 aaPredicted RBP9.39□□□□□ -0.91
YBX3-213ENST00000542641 IFI27L2Q9H2X8 130 aa9.39□□□□□ -0.91
YBX3-213ENST00000542641 PIPOXQ9P0Z9 390 aa9.39□□□□□ -0.91
YBX3-213ENST00000542641 ZNF221Q9UK13 617 aa9.39□□□□□ -0.91
YBX3-213ENST00000542641 DISC1C4P0D8 188 aa9.38□□□□□ -0.91
YBX3-213ENST00000542641 GAPDHP04406 335 aaKnown RBP9.38□□□□□ -0.91
YBX3-213ENST00000542641 AMY2AP04746 511 aa9.38□□□□□ -0.91
YBX3-213ENST00000542641 FAM157CP0CG43 387 aa9.38□□□□□ -0.91
YBX3-213ENST00000542641 PAX6P26367 422 aa9.38□□□□□ -0.91
YBX3-213ENST00000542641 FAUP35544 74 aaKnown RBP9.38□□□□□ -0.91
YBX3-213ENST00000542641 FXYD4P59646 89 aa9.38□□□□□ -0.91
YBX3-213ENST00000542641 KLF9Q13886 244 aaPredicted RBP9.38□□□□□ -0.91
YBX3-213ENST00000542641 ZNF660Q6AZW8 331 aaPredicted RBP9.38□□□□□ -0.91
YBX3-213ENST00000542641 FAAP20Q6NZ36 180 aa9.38□□□□□ -0.91
YBX3-213ENST00000542641 ODF3L1Q8IXM7 274 aa9.38□□□□□ -0.91
YBX3-213ENST00000542641 ARRDC1Q8N5I2 433 aa9.38□□□□□ -0.91
YBX3-213ENST00000542641 OR4C16Q8NGL9 310 aa9.38□□□□□ -0.91
YBX3-213ENST00000542641 OR56B4Q8NH76 319 aa9.38□□□□□ -0.91
YBX3-213ENST00000542641 TOMM40LQ969M1 308 aa9.38□□□□□ -0.91
YBX3-213ENST00000542641 S1PR3Q99500 378 aa9.38□□□□□ -0.91
YBX3-213ENST00000542641 SLC6A7Q99884 636 aa9.38□□□□□ -0.91
YBX3-213ENST00000542641 CCDC32Q9BV29 185 aa9.38□□□□□ -0.91
YBX3-213ENST00000542641 OR2D2Q9H210 308 aa9.38□□□□□ -0.91
YBX3-213ENST00000542641 MCUBQ9NWR8 336 aa9.38□□□□□ -0.91
YBX3-213ENST00000542641 SONP18583 2426 aaKnown RBP9.37□□□□□ -0.91
YBX3-213ENST00000542641 SAA2-SAA4A0A096LPE2 208 aa9.37□□□□□ -0.91
YBX3-213ENST00000542641 IGKV1D-13A0A0B4J2D9 117 aa9.37□□□□□ -0.91
YBX3-213ENST00000542641 LINC00854A0A1B0GVQ3 168 aa9.37□□□□□ -0.91
YBX3-213ENST00000542641 MDFIC2A0A1B0GVS7 189 aa9.37□□□□□ -0.91
YBX3-213ENST00000542641 OOSP1A8MZH6 123 aa9.37□□□□□ -0.91
YBX3-213ENST00000542641 HSD17B6O14756 317 aa9.37□□□□□ -0.91
YBX3-213ENST00000542641 SAA2P0DJI9 122 aaPredicted RBP9.37□□□□□ -0.91
YBX3-213ENST00000542641 IGKV1-13P0DP09 117 aa9.37□□□□□ -0.91
YBX3-213ENST00000542641 REG1BP48304 166 aa9.37□□□□□ -0.91
YBX3-213ENST00000542641 ARHGDIBP52566 201 aa9.37□□□□□ -0.91
YBX3-213ENST00000542641 ZNF137PP52743 207 aa9.37□□□□□ -0.91
YBX3-213ENST00000542641 DIAPH2-AS1Q14236 149 aa9.37□□□□□ -0.91
YBX3-213ENST00000542641 SCGB2B2Q4G0G5 96 aa9.37□□□□□ -0.91
YBX3-213ENST00000542641 PLA1AQ53H76 456 aa9.37□□□□□ -0.91
YBX3-213ENST00000542641 CCDC144NLQ6NUI1 221 aa9.37□□□□□ -0.91
YBX3-213ENST00000542641 RBMS3Q6XE24 437 aaKnown RBP9.37□□□□□ -0.91
YBX3-213ENST00000542641 LDLRAD3Q86YD5 345 aa9.37□□□□□ -0.91
YBX3-213ENST00000542641 TGIF2LXQ8IUE1 241 aa9.37□□□□□ -0.91
YBX3-213ENST00000542641 DYNAPQ8N1N2 210 aa9.37□□□□□ -0.91
YBX3-213ENST00000542641 SIGLECL1Q8N7X8 197 aa9.37□□□□□ -0.91
YBX3-213ENST00000542641 SECTM1Q8WVN6 248 aa9.37□□□□□ -0.91
YBX3-213ENST00000542641 RTN4IP1Q8WWV3 396 aaPredicted RBP9.37□□□□□ -0.91
YBX3-213ENST00000542641 ST6GALNAC6Q969X2 333 aa9.37□□□□□ -0.91
YBX3-213ENST00000542641 TSC22D3Q99576 134 aa9.37□□□□□ -0.91
YBX3-213ENST00000542641 SLC5A7Q9GZV3 580 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms