RNA–Protein interactions for RNA: ENST00000542397.5

C12orf56-205, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best)

Gene C12orf56, Length 935 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-205ENST00000542397 ZNF420Q8TAQ5 688 aaPredicted RBP3.89□□□□□ -1.79
C12orf56-205ENST00000542397 AQP3Q92482 292 aa3.89□□□□□ -1.79
C12orf56-205ENST00000542397 PIGCQ92535 297 aa3.89□□□□□ -1.79
C12orf56-205ENST00000542397 RGP1Q92546 391 aaPredicted RBP3.89□□□□□ -1.79
C12orf56-205ENST00000542397 C12orf43Q96C57 262 aaKnown RBP3.89□□□□□ -1.79
C12orf56-205ENST00000542397 ADAT3Q96EY9 351 aaPredicted RBP3.89□□□□□ -1.79
C12orf56-205ENST00000542397 RNF170Q96K19 258 aa3.89□□□□□ -1.79
C12orf56-205ENST00000542397 PGLYRP3Q96LB9 341 aa3.89□□□□□ -1.79
C12orf56-205ENST00000542397 PDCD1LG2Q9BQ51 273 aa3.89□□□□□ -1.79
C12orf56-205ENST00000542397 MND1Q9BWT6 205 aa3.89□□□□□ -1.79
C12orf56-205ENST00000542397 YTHDF1Q9BYJ9 559 aaKnown RBP3.89□□□□□ -1.79
C12orf56-205ENST00000542397 PKIBQ9C010 78 aa3.89□□□□□ -1.79
C12orf56-205ENST00000542397 COMMD4Q9H0A8 199 aa3.89□□□□□ -1.79
C12orf56-205ENST00000542397 PLEKHA1Q9HB21 404 aa3.89□□□□□ -1.79
C12orf56-205ENST00000542397 PATZ1Q9HBE1 687 aaKnown RBP3.89□□□□□ -1.79
C12orf56-205ENST00000542397 TMEM165Q9HC07 324 aa3.89□□□□□ -1.79
C12orf56-205ENST00000542397 ISYNA1Q9NPH2 558 aa3.89□□□□□ -1.79
C12orf56-205ENST00000542397 UFSP2Q9NUQ7 469 aa3.89□□□□□ -1.79
C12orf56-205ENST00000542397 TECRQ9NZ01 308 aaKnown RBP3.89□□□□□ -1.79
C12orf56-205ENST00000542397 ERVK-18Q9QC07 812 aa3.89□□□□□ -1.79
C12orf56-205ENST00000542397 KAAG1Q9UBP8 84 aa3.89□□□□□ -1.79
C12orf56-205ENST00000542397 ERGIC3Q9Y282 383 aa3.89□□□□□ -1.79
C12orf56-205ENST00000542397 PPIAL4AQ9Y536 164 aa3.89□□□□□ -1.79
C12orf56-205ENST00000542397 RYR2Q92736 4967 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 IGKV1-27A0A075B6S5 117 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 IGHV3-64DA0A0J9YX35 117 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 CDIPTO14735 213 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 GPX5O75715 221 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 IGKV3-20P01619 116 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 ALDOBP05062 364 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 MSMBP08118 114 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 WNT2P09544 360 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 PGA5P0DJD9 388 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 RRASP10301 218 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 IGFBP3P17936 291 aaPredicted RBP3.88□□□□□ -1.79
C12orf56-205ENST00000542397 ATF1P18846 271 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 PRKACBP22694 351 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 SRP14P37108 136 aaKnown RBP3.88□□□□□ -1.79
C12orf56-205ENST00000542397 RBP2P50120 134 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 ERVK11-1P61568 191 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 RPS11P62280 158 aaKnown RBP eCLIP3.88□□□□□ -1.79
C12orf56-205ENST00000542397 IL24Q13007 206 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 TPBGQ13641 420 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 MICBQ29980 383 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 YIF1BQ5BJH7 314 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 FAM201AQ5SY85 155 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 STUMQ69YW2 141 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 ASPHD2Q6ICH7 369 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 ZNF826PQ6ZT77 177 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 Q6ZVQ6 151 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 SMIM29Q86T20 159 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 OR5D14Q8NGL3 314 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 ZNF671Q8TAW3 534 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 LRRC29Q8WV35 223 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 TAF15Q92804 592 aaKnown RBP eCLIP3.88□□□□□ -1.79
C12orf56-205ENST00000542397 GHSRQ92847 366 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 RPL3LQ92901 407 aaKnown RBP3.88□□□□□ -1.79
C12orf56-205ENST00000542397 FGGYQ96C11 551 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 CNBD2Q96M20 576 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 NRIP2Q9BQI9 281 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 TMEM246Q9BRR3 403 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 UQCC2Q9BRT2 126 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 DNTTIP1Q9H147 329 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 NEK6Q9HC98 313 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 HES4Q9HCC6 221 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 C1orf123Q9NWV4 160 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 RASL12Q9NYN1 266 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 TREM2Q9NZC2 230 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 MIOXQ9UGB7 285 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 SLC7A11Q9UPY5 501 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 POLDIP2Q9Y2S7 368 aa3.88□□□□□ -1.79
C12orf56-205ENST00000542397 ISPDA4D126 451 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 A6NIN4 97 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 SMIM1B2RUZ4 78 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 H3BSH0 61 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 J3QLI3 93 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 SIGLEC5O15389 551 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 BUB3O43684 328 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 SULT1B1O43704 296 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 SYNGR1O43759 233 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 FOXH1O75593 365 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 RHBDL1O75783 438 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 SC5DO75845 299 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 NDUFA7O95182 113 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 CD2P06729 351 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 OCM2P0CE71 109 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 CELP19835 753 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 HNF1AP20823 631 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 PCMT1P22061 227 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 GALP22466 123 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 CD80P33681 288 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 HAAOP46952 286 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 FHITP49789 147 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 ATP1B3P54709 279 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 PAX2Q02962 417 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 ARL16Q0P5N6 197 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 MLLT11Q13015 90 aaPredicted RBP3.87□□□□□ -1.79
C12orf56-205ENST00000542397 RIGQ13278 110 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 SMIM21Q3B7S5 101 aa3.87□□□□□ -1.79
C12orf56-205ENST00000542397 Q499Y3 187 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms