RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 FAM78BQ5VT40 261 aa13.75□□□□□ -0.21
VARS2-212ENST00000542001 ZNF703Q9H7S9 590 aaPredicted RBP13.75□□□□□ -0.21
VARS2-212ENST00000542001 PNRC2Q9NPJ4 139 aaKnown RBP13.75□□□□□ -0.21
VARS2-212ENST00000542001 ZNF716A6NP11 495 aa13.75□□□□□ -0.21
VARS2-212ENST00000542001 F6UZH7 168 aa13.75□□□□□ -0.21
VARS2-212ENST00000542001 DEFA4P12838 97 aa13.75□□□□□ -0.21
VARS2-212ENST00000542001 SLC35B1P78383 322 aa13.75□□□□□ -0.21
VARS2-212ENST00000542001 TNFAIP6P98066 277 aaPredicted RBP13.75□□□□□ -0.21
VARS2-212ENST00000542001 Q0VFX4 171 aa13.75□□□□□ -0.21
VARS2-212ENST00000542001 VWA1Q6PCB0 445 aa13.75□□□□□ -0.21
VARS2-212ENST00000542001 NABP1Q96AH0 204 aa13.75□□□□□ -0.21
VARS2-212ENST00000542001 RPRMQ9NS64 109 aa13.75□□□□□ -0.21
VARS2-212ENST00000542001 GALR2O43603 387 aaPredicted RBP13.75□□□□□ -0.21
VARS2-212ENST00000542001 FOSL1P15407 271 aa13.75□□□□□ -0.21
VARS2-212ENST00000542001 KLF3P57682 345 aaPredicted RBP13.75□□□□□ -0.21
VARS2-212ENST00000542001 CISD2Q8N5K1 135 aaKnown RBP13.75□□□□□ -0.21
VARS2-212ENST00000542001 C15orf54Q8N8G6 183 aa13.75□□□□□ -0.21
VARS2-212ENST00000542001 ZNF355PQ9NSJ1 428 aa13.75□□□□□ -0.21
VARS2-212ENST00000542001 RALYQ9UKM9 306 aaKnown RBP13.75□□□□□ -0.21
VARS2-212ENST00000542001 SSUH2Q9Y2M2 353 aa13.75□□□□□ -0.21
VARS2-212ENST00000542001 PTPRQQ9UMZ3 2332 aa13.74□□□□□ -0.21
VARS2-212ENST00000542001 LRRC30A6NM36 301 aa13.74□□□□□ -0.21
VARS2-212ENST00000542001 AP4M1O00189 453 aa13.74□□□□□ -0.21
VARS2-212ENST00000542001 MDH2P40926 338 aaKnown RBP13.74□□□□□ -0.21
VARS2-212ENST00000542001 CCL20P78556 96 aa13.74□□□□□ -0.21
VARS2-212ENST00000542001 ZNRF1Q8ND25 227 aa13.74□□□□□ -0.21
VARS2-212ENST00000542001 KLF14Q8TD94 323 aaPredicted RBP13.74□□□□□ -0.21
VARS2-212ENST00000542001 CIB3Q96Q77 187 aaPredicted RBP13.74□□□□□ -0.21
VARS2-212ENST00000542001 LRRC3CA6NJW4 275 aa13.74□□□□□ -0.21
VARS2-212ENST00000542001 ZG16O60844 167 aa13.74□□□□□ -0.21
VARS2-212ENST00000542001 CLDN14O95500 239 aa13.74□□□□□ -0.21
VARS2-212ENST00000542001 APOA2P02652 100 aa13.74□□□□□ -0.21
VARS2-212ENST00000542001 GAPDHP04406 335 aaKnown RBP13.74□□□□□ -0.21
VARS2-212ENST00000542001 S100A8P05109 93 aa13.74□□□□□ -0.21
VARS2-212ENST00000542001 BSXQ3C1V8 233 aa13.74□□□□□ -0.21
VARS2-212ENST00000542001 FAM214BQ7L5A3 538 aa13.74□□□□□ -0.21
VARS2-212ENST00000542001 TAAR6Q96RI8 345 aa13.74□□□□□ -0.21
VARS2-212ENST00000542001 IGF2RP11717 2491 aa13.74□□□□□ -0.21
VARS2-212ENST00000542001 ARFGEF3Q5TH69 2177 aa13.74□□□□□ -0.21
VARS2-212ENST00000542001 TANC1Q9C0D5 1861 aa13.74□□□□□ -0.21
VARS2-212ENST00000542001 WIPF3A6NGB9 483 aa13.74□□□□□ -0.21
VARS2-212ENST00000542001 HSPB1P04792 205 aaKnown RBP13.74□□□□□ -0.21
VARS2-212ENST00000542001 GALR1P47211 349 aa13.74□□□□□ -0.21
VARS2-212ENST00000542001 GFRALQ6UXV0 394 aa13.74□□□□□ -0.21
VARS2-212ENST00000542001 RNF166Q96A37 237 aaPredicted RBP13.74□□□□□ -0.21
VARS2-212ENST00000542001 CXXC4Q9H2H0 198 aa13.74□□□□□ -0.21
VARS2-212ENST00000542001 ZDHHC11Q9H8X9 412 aa13.74□□□□□ -0.21
VARS2-212ENST00000542001 C2orf16Q68DN1 1984 aa13.73□□□□□ -0.21
VARS2-212ENST00000542001 TLN1Q9Y490 2541 aaKnown RBP13.73□□□□□ -0.21
VARS2-212ENST00000542001 SLC25A53Q5H9E4 307 aa13.73□□□□□ -0.21
VARS2-212ENST00000542001 RAB9BQ9NP90 201 aa13.73□□□□□ -0.21
VARS2-212ENST00000542001 TGIF2-C20orf24A0A0A6YYL0 155 aa13.73□□□□□ -0.21
VARS2-212ENST00000542001 BTBD17A6NE02 478 aa13.73□□□□□ -0.21
VARS2-212ENST00000542001 NKX6-3A6NJ46 265 aa13.73□□□□□ -0.21
VARS2-212ENST00000542001 S1PR2O95136 353 aa13.73□□□□□ -0.21
VARS2-212ENST00000542001 MMP7P09237 267 aaPredicted RBP13.73□□□□□ -0.21
VARS2-212ENST00000542001 ERVFC1-1P60608 527 aa13.73□□□□□ -0.21
VARS2-212ENST00000542001 SRSF6Q13247 344 aaKnown RBP13.73□□□□□ -0.21
VARS2-212ENST00000542001 MOB1BQ7L9L4 216 aa13.73□□□□□ -0.21
VARS2-212ENST00000542001 HSD17B10Q99714 261 aaKnown RBP13.73□□□□□ -0.21
VARS2-212ENST00000542001 MYOZ1Q9NP98 299 aaPredicted RBP13.73□□□□□ -0.21
VARS2-212ENST00000542001 IGHV3-72A0A0B4J1Y9 119 aa13.73□□□□□ -0.21
VARS2-212ENST00000542001 TRAV38-1A0A0B4J264 116 aa13.73□□□□□ -0.21
VARS2-212ENST00000542001 MRPS11P82912 194 aaKnown RBP13.73□□□□□ -0.21
VARS2-212ENST00000542001 PRB3Q04118 309 aaPredicted RBP13.73□□□□□ -0.21
VARS2-212ENST00000542001 WBP1Q96G27 269 aa13.73□□□□□ -0.21
VARS2-212ENST00000542001 BOD1Q96IK1 185 aa13.73□□□□□ -0.21
VARS2-212ENST00000542001 TM2D1Q9BX74 207 aa13.73□□□□□ -0.21
VARS2-212ENST00000542001 ARHGAP21Q5T5U3 1957 aa13.73□□□□□ -0.21
VARS2-212ENST00000542001 MKRN2OSH3BPM6 223 aa13.72□□□□□ -0.21
VARS2-212ENST00000542001 COX7A1P24310 79 aa13.72□□□□□ -0.21
VARS2-212ENST00000542001 G0S2P27469 103 aa13.72□□□□□ -0.21
VARS2-212ENST00000542001 ZDHHC16Q969W1 377 aa13.72□□□□□ -0.21
VARS2-212ENST00000542001 MARVELD3Q96A59 401 aa13.72□□□□□ -0.21
VARS2-212ENST00000542001 CCL13Q99616 98 aa13.72□□□□□ -0.21
VARS2-212ENST00000542001 ZNF251Q9BRH9 671 aa13.72□□□□□ -0.21
VARS2-212ENST00000542001 WFDC1Q9HC57 220 aa13.72□□□□□ -0.21
VARS2-212ENST00000542001 PRDX2P32119 198 aa13.72□□□□□ -0.21
VARS2-212ENST00000542001 LINC00205P59089 165 aa13.72□□□□□ -0.21
VARS2-212ENST00000542001 HFEQ30201 348 aa13.72□□□□□ -0.21
VARS2-212ENST00000542001 RNF212Q495C1 297 aa13.72□□□□□ -0.21
VARS2-212ENST00000542001 DRAM1Q8N682 238 aa13.72□□□□□ -0.21
VARS2-212ENST00000542001 OR5D13Q8NGL4 314 aa13.72□□□□□ -0.21
VARS2-212ENST00000542001 C11orf94C9JXX5 98 aa13.72□□□□□ -0.21
VARS2-212ENST00000542001 DANCRP0C864 163 aa13.72□□□□□ -0.21
VARS2-212ENST00000542001 FAM3BP58499 235 aaPredicted RBP13.72□□□□□ -0.21
VARS2-212ENST00000542001 QRFPP83859 136 aa13.72□□□□□ -0.21
VARS2-212ENST00000542001 KCNMB1Q16558 191 aa13.72□□□□□ -0.21
VARS2-212ENST00000542001 MRPL30Q8TCC3 161 aaKnown RBP13.72□□□□□ -0.21
VARS2-212ENST00000542001 HIST1H2BAQ96A08 127 aa13.72□□□□□ -0.21
VARS2-212ENST00000542001 DAZAP1Q96EP5 407 aaKnown RBP13.72□□□□□ -0.21
VARS2-212ENST00000542001 EGLN1Q9GZT9 426 aa13.72□□□□□ -0.21
VARS2-212ENST00000542001 OR10J4P0C629 311 aa13.71□□□□□ -0.21
VARS2-212ENST00000542001 NTF4P34130 210 aa13.71□□□□□ -0.21
VARS2-212ENST00000542001 THBS3P49746 956 aa13.71□□□□□ -0.21
VARS2-212ENST00000542001 ZCCHC24Q8N2G6 241 aaKnown RBP13.71□□□□□ -0.21
VARS2-212ENST00000542001 FAM89BQ8N5H3 189 aa13.71□□□□□ -0.21
VARS2-212ENST00000542001 SLC35E1Q96K37 410 aa13.71□□□□□ -0.21
VARS2-212ENST00000542001 REPIN1Q9BWE0 567 aaKnown RBP13.71□□□□□ -0.21
VARS2-212ENST00000542001 PRDM14Q9GZV8 571 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms