RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 OR13F1Q8NGS4 319 aa13.4□□□□□ -0.26
CD9-209ENST00000540891 ABHD14BQ96IU4 210 aa13.4□□□□□ -0.26
CD9-209ENST00000540891 CABLES2Q9BTV7 478 aa13.4□□□□□ -0.26
CD9-209ENST00000540891 TOLLIPQ9H0E2 274 aa13.4□□□□□ -0.26
CD9-209ENST00000540891 PIPOXQ9P0Z9 390 aa13.4□□□□□ -0.26
CD9-209ENST00000540891 ETV7Q9Y603 341 aa13.4□□□□□ -0.26
CD9-209ENST00000540891 TSPAN15O95858 294 aa13.39□□□□□ -0.27
CD9-209ENST00000540891 ZNF260Q3ZCT1 412 aa13.39□□□□□ -0.27
CD9-209ENST00000540891 RPL39P5Q59GN2 51 aa13.39□□□□□ -0.27
CD9-209ENST00000540891 IGSF11Q5DX21 431 aa13.39□□□□□ -0.27
CD9-209ENST00000540891 C9orf152Q5JTZ5 239 aa13.39□□□□□ -0.27
CD9-209ENST00000540891 HACD4Q5VWC8 232 aa13.39□□□□□ -0.27
CD9-209ENST00000540891 FAM71F2Q6NXP2 309 aa13.39□□□□□ -0.27
CD9-209ENST00000540891 RDH8Q9NYR8 311 aa13.39□□□□□ -0.27
CD9-209ENST00000540891 CMYA5Q8N3K9 4069 aa13.38□□□□□ -0.27
CD9-209ENST00000540891 RAB29O14966 203 aa13.38□□□□□ -0.27
CD9-209ENST00000540891 HSPA12AO43301 675 aa13.38□□□□□ -0.27
CD9-209ENST00000540891 PROP1O75360 226 aa13.38□□□□□ -0.27
CD9-209ENST00000540891 PEX14O75381 377 aa13.38□□□□□ -0.27
CD9-209ENST00000540891 FBXO24O75426 580 aa13.38□□□□□ -0.27
CD9-209ENST00000540891 F2RL1P55085 397 aa13.38□□□□□ -0.27
CD9-209ENST00000540891 NCS1P62166 190 aa13.38□□□□□ -0.27
CD9-209ENST00000540891 KIR2DS1Q14954 304 aa13.38□□□□□ -0.27
CD9-209ENST00000540891 ARL6IP1Q15041 203 aa13.38□□□□□ -0.27
CD9-209ENST00000540891 SRSF7Q16629 238 aaKnown RBP eCLIP13.38□□□□□ -0.27
CD9-209ENST00000540891 C10orf99Q6UWK7 81 aa13.38□□□□□ -0.27
CD9-209ENST00000540891 Q6ZS49 121 aa13.38□□□□□ -0.27
CD9-209ENST00000540891 NUDCD2Q8WVJ2 157 aa13.38□□□□□ -0.27
CD9-209ENST00000540891 EDARADDQ8WWZ3 215 aa13.38□□□□□ -0.27
CD9-209ENST00000540891 RITA1Q96K30 269 aa13.38□□□□□ -0.27
CD9-209ENST00000540891 SPATA2Q9UM82 520 aa13.38□□□□□ -0.27
CD9-209ENST00000540891 TRBV6-7A0A0A0MS04 114 aa13.37□□□□□ -0.27
CD9-209ENST00000540891 TMEM235A6NFC5 223 aa13.37□□□□□ -0.27
CD9-209ENST00000540891 NCBP2LA6PVI3 153 aaKnown RBP13.37□□□□□ -0.27
CD9-209ENST00000540891 ADARB2-AS1A8MUL3 147 aa13.37□□□□□ -0.27
CD9-209ENST00000540891 SSX5O60225 188 aa13.37□□□□□ -0.27
CD9-209ENST00000540891 TMEM127O75204 238 aa13.37□□□□□ -0.27
CD9-209ENST00000540891 SCGNO76038 276 aa13.37□□□□□ -0.27
CD9-209ENST00000540891 GSTP1P09211 210 aaKnown RBP13.37□□□□□ -0.27
CD9-209ENST00000540891 CT45A6P0DMU7 189 aa13.37□□□□□ -0.27
CD9-209ENST00000540891 CT45A5P0DMU8 189 aa13.37□□□□□ -0.27
CD9-209ENST00000540891 CT45A7P0DMV0 189 aa13.37□□□□□ -0.27
CD9-209ENST00000540891 DTYMKP23919 212 aa13.37□□□□□ -0.27
CD9-209ENST00000540891 SERPINB10P48595 397 aa13.37□□□□□ -0.27
CD9-209ENST00000540891 TCTEX1D4Q5JR98 221 aa13.37□□□□□ -0.27
CD9-209ENST00000540891 FAM71E2Q8N5Q1 922 aa13.37□□□□□ -0.27
CD9-209ENST00000540891 S1PR3Q99500 378 aa13.37□□□□□ -0.27
CD9-209ENST00000540891 CITED2Q99967 270 aaPredicted RBP13.37□□□□□ -0.27
CD9-209ENST00000540891 TET2Q6N021 2002 aaPredicted RBP13.37□□□□□ -0.27
CD9-209ENST00000540891 LINC01548A6NM66 108 aa13.36□□□□□ -0.27
CD9-209ENST00000540891 BET1O15155 118 aa13.36□□□□□ -0.27
CD9-209ENST00000540891 DIRAS3O95661 229 aa13.36□□□□□ -0.27
CD9-209ENST00000540891 IGHG2P01859 326 aa13.36□□□□□ -0.27
CD9-209ENST00000540891 TALDO1P37837 337 aa13.36□□□□□ -0.27
CD9-209ENST00000540891 VBP1P61758 197 aa13.36□□□□□ -0.27
CD9-209ENST00000540891 C2orf68Q2NKX9 166 aa13.36□□□□□ -0.27
CD9-209ENST00000540891 CROCCP3Q8IVE0 287 aa13.36□□□□□ -0.27
CD9-209ENST00000540891 OR5AU1Q8NGC0 362 aa13.36□□□□□ -0.27
CD9-209ENST00000540891 OR8H1Q8NGG4 311 aa13.36□□□□□ -0.27
CD9-209ENST00000540891 NAA50Q9GZZ1 169 aaKnown RBP13.36□□□□□ -0.27
CD9-209ENST00000540891 ABCG5Q9H222 651 aa13.36□□□□□ -0.27
CD9-209ENST00000540891 MMP27Q9H306 513 aa13.36□□□□□ -0.27
CD9-209ENST00000540891 GHITMQ9H3K2 345 aa13.36□□□□□ -0.27
CD9-209ENST00000540891 LIN7CQ9NUP9 197 aaKnown RBP13.36□□□□□ -0.27
CD9-209ENST00000540891 RNF150Q9ULK6 438 aa13.36□□□□□ -0.27
CD9-209ENST00000540891 MGAM2Q2M2H8 2515 aa13.36□□□□□ -0.27
CD9-209ENST00000540891 NBEAL1Q6ZS30 2694 aa13.36□□□□□ -0.27
CD9-209ENST00000540891 PKD1L1Q8TDX9 2849 aa13.35□□□□□ -0.27
CD9-209ENST00000540891 CNTFRP26992 372 aa13.35□□□□□ -0.27
CD9-209ENST00000540891 LINC00205P59089 165 aa13.35□□□□□ -0.27
CD9-209ENST00000540891 ACTBP60709 375 aa13.35□□□□□ -0.27
CD9-209ENST00000540891 CD83Q01151 205 aa13.35□□□□□ -0.27
CD9-209ENST00000540891 PNLIPRP3Q17RR3 467 aa13.35□□□□□ -0.27
CD9-209ENST00000540891 GLDNQ6ZMI3 551 aaPredicted RBP13.35□□□□□ -0.27
CD9-209ENST00000540891 CENPVQ7Z7K6 275 aaPredicted RBP13.35□□□□□ -0.27
CD9-209ENST00000540891 SLC25A46Q96AG3 418 aa13.35□□□□□ -0.27
CD9-209ENST00000540891 NOL4LQ96MY1 436 aaPredicted RBP13.35□□□□□ -0.27
CD9-209ENST00000540891 WNK1Q9H4A3 2382 aa13.34□□□□□ -0.27
CD9-209ENST00000540891 TRAV18A0A075B6X5 111 aa13.34□□□□□ -0.27
CD9-209ENST00000540891 H0YJW9 148 aa13.34□□□□□ -0.27
CD9-209ENST00000540891 CSF1P09603 554 aa13.34□□□□□ -0.27
CD9-209ENST00000540891 GPR12P47775 334 aa13.34□□□□□ -0.27
CD9-209ENST00000540891 ALDH3B2P48448 385 aa13.34□□□□□ -0.27
CD9-209ENST00000540891 GNG2P59768 71 aa13.34□□□□□ -0.27
CD9-209ENST00000540891 PITPNAQ00169 270 aa13.34□□□□□ -0.27
CD9-209ENST00000540891 FAM131AQ6UXB0 335 aa13.34□□□□□ -0.27
CD9-209ENST00000540891 SLC35E3Q7Z769 313 aa13.34□□□□□ -0.27
CD9-209ENST00000540891 ANKRD13BQ86YJ7 626 aa13.34□□□□□ -0.27
CD9-209ENST00000540891 H1FOOQ8IZA3 346 aaPredicted RBP13.34□□□□□ -0.27
CD9-209ENST00000540891 OR5AN1Q8NGI8 311 aa13.34□□□□□ -0.27
CD9-209ENST00000540891 OR10J5Q8NHC4 309 aa13.34□□□□□ -0.27
CD9-209ENST00000540891 C5orf30Q96GV9 206 aa13.34□□□□□ -0.27
CD9-209ENST00000540891 HSPB9Q9BQS6 159 aa13.34□□□□□ -0.27
CD9-209ENST00000540891 ST6GALNAC5Q9BVH7 336 aa13.34□□□□□ -0.27
CD9-209ENST00000540891 MRPS26Q9BYN8 205 aaKnown RBP13.34□□□□□ -0.27
CD9-209ENST00000540891 DCSTAMPQ9H295 470 aa13.34□□□□□ -0.27
CD9-209ENST00000540891 LINC00527Q9UJ94 153 aa13.34□□□□□ -0.27
CD9-209ENST00000540891 VWFP04275 2813 aa13.33□□□□□ -0.28
CD9-209ENST00000540891 A0A0A6YYH2 397 aa13.33□□□□□ -0.28
CD9-209ENST00000540891 A6NJ64 397 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms