RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 FAM234AQ9H0X4 552 aa10.33□□□□□ -0.76
SMAD3-204ENST00000540846 UBQLN2Q9UHD9 624 aa10.33□□□□□ -0.76
SMAD3-204ENST00000540846 TNFRSF13BO14836 293 aaPredicted RBP10.32□□□□□ -0.76
SMAD3-204ENST00000540846 SPINT2O43291 252 aa10.32□□□□□ -0.76
SMAD3-204ENST00000540846 TNFSF12O43508 249 aa10.32□□□□□ -0.76
SMAD3-204ENST00000540846 OR8U9P0C7N5 309 aa10.32□□□□□ -0.76
SMAD3-204ENST00000540846 S100A10P60903 97 aa10.32□□□□□ -0.76
SMAD3-204ENST00000540846 UBA52P62987 128 aaKnown RBP10.32□□□□□ -0.76
SMAD3-204ENST00000540846 HFEQ30201 348 aa10.32□□□□□ -0.76
SMAD3-204ENST00000540846 ZNF788Q6ZQV5 615 aa10.32□□□□□ -0.76
SMAD3-204ENST00000540846 ZNF695Q8IW36 515 aa10.32□□□□□ -0.76
SMAD3-204ENST00000540846 SELENOHQ8IZQ5 122 aaKnown RBP10.32□□□□□ -0.76
SMAD3-204ENST00000540846 DRAM1Q8N682 238 aa10.32□□□□□ -0.76
SMAD3-204ENST00000540846 OR52L2PQ8NGH6 319 aa10.32□□□□□ -0.76
SMAD3-204ENST00000540846 OR8U1Q8NH10 309 aa10.32□□□□□ -0.76
SMAD3-204ENST00000540846 OR1S1Q8NH92 325 aa10.32□□□□□ -0.76
SMAD3-204ENST00000540846 NINJ1Q92982 152 aa10.32□□□□□ -0.76
SMAD3-204ENST00000540846 RBPMSQ93062 196 aaKnown RBP10.32□□□□□ -0.76
SMAD3-204ENST00000540846 ARL11Q969Q4 196 aa10.32□□□□□ -0.76
SMAD3-204ENST00000540846 RRNAD1Q96FB5 475 aaKnown RBP10.32□□□□□ -0.76
SMAD3-204ENST00000540846 AQP10Q96PS8 301 aa10.32□□□□□ -0.76
SMAD3-204ENST00000540846 DCTN5Q9BTE1 182 aa10.32□□□□□ -0.76
SMAD3-204ENST00000540846 GSX2Q9BZM3 304 aa10.32□□□□□ -0.76
SMAD3-204ENST00000540846 ZNF665Q9H7R5 613 aa10.32□□□□□ -0.76
SMAD3-204ENST00000540846 KCNS2Q9ULS6 477 aa10.32□□□□□ -0.76
SMAD3-204ENST00000540846 KANTRA0A1W2PQU2 76 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 LGALS8O00214 317 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 SIGLEC5O15389 551 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 DEDDO75618 318 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 IGHV2-70P01814 119 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 SELLP14151 372 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 GZMHP20718 246 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 PPP1CCP36873 323 aaKnown RBP10.31□□□□□ -0.76
SMAD3-204ENST00000540846 NMSQ5H8A3 153 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 C1orf87Q8N0U7 546 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 ZNF645Q8N7E2 425 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 ZBTB34Q8NCN2 500 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 SPIN2AQ99865 258 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 SPIN2BQ9BPZ2 258 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 CHODLQ9H9P2 273 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 ZFP57Q9NU63 452 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 LIN7CQ9NUP9 197 aaKnown RBP10.31□□□□□ -0.76
SMAD3-204ENST00000540846 OR6C3Q9NZP0 311 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 JPT1Q9UK76 154 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 RBM7Q9Y580 266 aaKnown RBP10.31□□□□□ -0.76
SMAD3-204ENST00000540846 MAP1AP78559 2803 aaPredicted RBP10.31□□□□□ -0.76
SMAD3-204ENST00000540846 PPIAL4EA0A075B759 164 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 RPS10-NUDT3A0A1W2PQS6 291 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 NKX6-3A6NJ46 265 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 RNF212BA8MTL3 300 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 PPIAL4DF5H284 164 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 F2RL2O00254 374 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 FCN3O75636 299 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 MBPP02686 304 aaPredicted RBP10.31□□□□□ -0.76
SMAD3-204ENST00000540846 PPIAL4FP0DN26 164 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 CGB3P0DN86 165 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 CGB7P0DN87 165 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 VDAC1P21796 283 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 EIF4EBP1Q13541 118 aaPredicted RBP10.31□□□□□ -0.76
SMAD3-204ENST00000540846 FAM219AQ8IW50 185 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 ZNF525Q8N782 197 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 OR4D5Q8NGN0 318 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 OR51H1Q8NH63 302 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 ARPC5LQ9BPX5 153 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 OR2S2Q9NQN1 319 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 PPIAL4AQ9Y536 164 aa10.31□□□□□ -0.76
SMAD3-204ENST00000540846 BAHCC1Q9P281 2608 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 TRAV38-1A0A0B4J264 116 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 A0A1B0GW55 424 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 MSGN1A6NI15 193 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 K7EPK0 472 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 GYPAP02724 150 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 SERPINE2P07093 398 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 DUX4L2P0CJ85 424 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 DUX4L3P0CJ86 424 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 DUX4L4P0CJ87 422 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 DUX4L5P0CJ88 424 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 DUX4L6P0CJ89 424 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 DUX4L7P0CJ90 424 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 NUP62P37198 522 aaPredicted RBP10.3□□□□□ -0.76
SMAD3-204ENST00000540846 EDDM3BP56851 147 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 SMCO1Q147U7 214 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 CLLU1Q5K131 121 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 FAM53AQ6NSI3 398 aaPredicted RBP10.3□□□□□ -0.76
SMAD3-204ENST00000540846 DUX4L9Q6RFH8 374 aaPredicted RBP10.3□□□□□ -0.76
SMAD3-204ENST00000540846 FAM71E2Q8N5Q1 922 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 FAM216BQ8N7L0 139 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 DEFB108BQ8NET1 73 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 OR52M1Q8NGK5 317 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 SCARB1Q8WTV0 552 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 ST8SIA2Q92186 375 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 C5orf30Q96GV9 206 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 ABHD14BQ96IU4 210 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 CCL13Q99616 98 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 OR2D2Q9H210 308 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 RAB9BQ9NP90 201 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 CALYQ9NYX4 217 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 DUX4Q9UBX2 424 aa10.3□□□□□ -0.76
SMAD3-204ENST00000540846 KCNAB3O43448 404 aa10.29□□□□□ -0.76
SMAD3-204ENST00000540846 SCGB1D2O95969 90 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms