RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 OR4C45A6NMZ5 311 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 KNCNA6PVL3 124 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 G3V2T6 193 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 H3BSA7 217 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 CHST10O43529 356 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 CFC1BP0CG36 223 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 CFC1P0CG37 223 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 RNF224P0DH78 156 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 OR10J1P30954 320 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 PHBP35232 272 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 UBE2AP49459 152 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 HERVK_113P63121 156 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 SURF2Q15527 256 aaPredicted RBP3.82□□□□□ -1.8
PRKDC-209ENST00000540819 ATAD3CQ5T2N8 411 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 C9orf64Q5T6V5 341 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 SAMD13Q5VXD3 122 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 DCUN1D2Q6PH85 259 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 ZNF561Q8N587 486 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 GDPD1Q8N9F7 314 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 PYURFQ96I23 114 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 FGF23Q9GZV9 251 aaPredicted RBP3.82□□□□□ -1.8
PRKDC-209ENST00000540819 TMEM138Q9NPI0 162 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 MMP26Q9NRE1 261 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 PAIP2BQ9ULR5 123 aaKnown RBP3.82□□□□□ -1.8
PRKDC-209ENST00000540819 RFNGQ9Y644 331 aa3.82□□□□□ -1.8
PRKDC-209ENST00000540819 DOCK5Q9H7D0 1870 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 NID2Q14112 1375 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 IGHV3-72A0A0B4J1Y9 119 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 TRAPPC13A5PLN9 417 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 SLC17A3O00476 420 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 MRASO14807 208 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 LINC01565O15544 149 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 CDRT1O95170 752 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 CCNE2O96020 404 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 FBP1P09467 338 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 PSG2P11465 335 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 SPI1P17947 270 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 ORM2P19652 201 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 ERP29P30040 261 aaKnown RBP3.81□□□□□ -1.8
PRKDC-209ENST00000540819 ZNF83P51522 516 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 ZNF136P52737 540 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 GABARAPL2P60520 117 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 FABP9Q0Z7S8 132 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 DAZ2Q13117 558 aaKnown RBP3.81□□□□□ -1.8
PRKDC-209ENST00000540819 FCN2Q15485 313 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 MRPL2Q5T653 305 aaKnown RBP3.81□□□□□ -1.8
PRKDC-209ENST00000540819 DAZ4Q86SG3 579 aaKnown RBP3.81□□□□□ -1.8
PRKDC-209ENST00000540819 ZNF440Q8IYI8 595 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 POM121L12Q8N7R1 296 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 YIPF7Q8N8F6 280 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 SUMF2Q8NBJ7 301 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 DNAJC30Q96LL9 226 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 C1orf147Q96MC9 270 aaPredicted RBP3.81□□□□□ -1.8
PRKDC-209ENST00000540819 SOSTQ9BQB4 213 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 MS4A8Q9BY19 250 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 ALX4Q9H161 411 aaPredicted RBP3.81□□□□□ -1.8
PRKDC-209ENST00000540819 MED28Q9H204 178 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 CDC42EP4Q9H3Q1 356 aaKnown RBP3.81□□□□□ -1.8
PRKDC-209ENST00000540819 DAZ1Q9NQZ3 744 aaKnown RBP3.81□□□□□ -1.8
PRKDC-209ENST00000540819 DAZ3Q9NR90 486 aaKnown RBP3.81□□□□□ -1.8
PRKDC-209ENST00000540819 CA10Q9NS85 328 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 ACER3Q9NUN7 267 aa3.81□□□□□ -1.8
PRKDC-209ENST00000540819 ARAP3Q8WWN8 1544 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 PCNX3Q9H6A9 2034 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 ADAMTS13Q76LX8 1427 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 MYH10P35580 1976 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 IGLV11-55A0A075B6I3 123 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 IGHV5-51A0A0C4DH38 117 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 A0A1W2PRE2 83 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 TMEM150BA6NC51 233 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 KRTAP16-1A8MUX0 517 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 B4DEV8 164 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 HMGB3O15347 200 aaKnown RBP3.8□□□□□ -1.8
PRKDC-209ENST00000540819 SOCS1O15524 211 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 DEDDO75618 318 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 SCO1O75880 301 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 APOMO95445 188 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 HLA-DRB1P01911 266 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 GZMHP20718 246 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 ESRRGP62508 458 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 BTN1A1Q13410 526 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 KCNJ8Q15842 424 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 TCF23Q7RTU1 214 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 PDPNQ86YL7 162 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 OSR2Q8N2R0 312 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 ANKRD29Q8N6D5 301 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 ZDHHC22Q8N966 263 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 OR8A1Q8NGG7 326 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 OR2T27Q8NH04 317 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 ROPN1LQ96C74 230 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 MS4A6EQ96DS6 147 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 CNBD2Q96M20 576 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 TMEM70Q9BUB7 260 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 TMEM147Q9BVK8 224 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 WFDC1Q9HC57 220 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 DHCR7Q9UBM7 475 aaKnown RBP3.8□□□□□ -1.8
PRKDC-209ENST00000540819 ANAPC10Q9UM13 185 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 SSR3Q9UNL2 185 aa3.8□□□□□ -1.8
PRKDC-209ENST00000540819 ZCCHC11Q5TAX3 1644 aaKnown RBP3.8□□□□□ -1.8
PRKDC-209ENST00000540819 THSD7AQ9UPZ6 1657 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms