RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 CLDN1O95832 211 aa11.83□□□□□ -0.52
UBE3B-210ENST00000539599 HAND1O96004 215 aa11.83□□□□□ -0.52
UBE3B-210ENST00000539599 IFNA5P01569 189 aa11.83□□□□□ -0.52
UBE3B-210ENST00000539599 BAXQ07812 192 aa11.83□□□□□ -0.52
UBE3B-210ENST00000539599 OR8G1Q15617 311 aa11.83□□□□□ -0.52
UBE3B-210ENST00000539599 KLF14Q8TD94 323 aaPredicted RBP11.83□□□□□ -0.52
UBE3B-210ENST00000539599 GATAD1Q8WUU5 269 aa11.83□□□□□ -0.52
UBE3B-210ENST00000539599 PKIBQ9C010 78 aa11.83□□□□□ -0.52
UBE3B-210ENST00000539599 NIT2Q9NQR4 276 aa11.83□□□□□ -0.52
UBE3B-210ENST00000539599 A0A1B0GU03 582 aa11.82□□□□□ -0.52
UBE3B-210ENST00000539599 LINC00587B1AMM8 73 aa11.82□□□□□ -0.52
UBE3B-210ENST00000539599 UBE2CO00762 179 aa11.82□□□□□ -0.52
UBE3B-210ENST00000539599 PGA5P0DJD9 388 aa11.82□□□□□ -0.52
UBE3B-210ENST00000539599 RAB2AP61019 212 aa11.82□□□□□ -0.52
UBE3B-210ENST00000539599 HEPN1Q6WQI6 88 aa11.82□□□□□ -0.52
UBE3B-210ENST00000539599 GNPNAT1Q96EK6 184 aaPredicted RBP11.82□□□□□ -0.52
UBE3B-210ENST00000539599 RIMS4Q9H426 269 aaPredicted RBP11.82□□□□□ -0.52
UBE3B-210ENST00000539599 PIEZO2Q9H5I5 2752 aa11.82□□□□□ -0.52
UBE3B-210ENST00000539599 RIF1Q5UIP0 2472 aaKnown RBP11.82□□□□□ -0.52
UBE3B-210ENST00000539599 TRBV6-6A0A0A6YYG2 114 aa11.82□□□□□ -0.52
UBE3B-210ENST00000539599 LRP5LA4QPB2 252 aa11.82□□□□□ -0.52
UBE3B-210ENST00000539599 C17orf98A8MV24 154 aa11.82□□□□□ -0.52
UBE3B-210ENST00000539599 S1PR2O95136 353 aa11.82□□□□□ -0.52
UBE3B-210ENST00000539599 PTBP3O95758 552 aaKnown RBP11.82□□□□□ -0.52
UBE3B-210ENST00000539599 PAX6P26367 422 aa11.82□□□□□ -0.52
UBE3B-210ENST00000539599 GLIPR1P48060 266 aa11.82□□□□□ -0.52
UBE3B-210ENST00000539599 BRWD1-AS2P59051 145 aa11.82□□□□□ -0.52
UBE3B-210ENST00000539599 GFI1BQ5VTD9 330 aa11.82□□□□□ -0.52
UBE3B-210ENST00000539599 ZNF787Q6DD87 383 aa11.82□□□□□ -0.52
UBE3B-210ENST00000539599 FDCSPQ8NFU4 85 aa11.82□□□□□ -0.52
UBE3B-210ENST00000539599 RCC1LQ96I51 464 aaKnown RBP11.82□□□□□ -0.52
UBE3B-210ENST00000539599 FAM234AQ9H0X4 552 aa11.82□□□□□ -0.52
UBE3B-210ENST00000539599 OTOGLQ3ZCN5 2332 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 TRBV23-1A0A0A0MS06 115 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 M0R296 226 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 IGHV2-5P01817 119 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 IFNA4P05014 189 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 S100GP29377 79 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 GABRA2P47869 451 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 ELOBQ15370 118 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 CLEC12BQ2HXU8 276 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 ZNF674Q2M3X9 581 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 C4orf17Q53FE4 359 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 UTF1Q5T230 341 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 DUXBA0A1W2PPF3 345 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 OR5H1A6NKK0 313 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 ZNF883P0CG24 379 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 MMP9P14780 707 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 EDDM3AQ14507 147 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 RNF212Q495C1 297 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 ZNF506Q5JVG8 444 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 C11orf53Q8IXP5 236 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 SCGB1C1Q8TD33 95 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 NANOS1Q8WY41 292 aaKnown RBP11.81□□□□□ -0.52
UBE3B-210ENST00000539599 IL22RA2Q969J5 263 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 COQ2Q96H96 371 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 RBKSQ9H477 322 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 TMEM9BQ9NQ34 198 aa11.81□□□□□ -0.52
UBE3B-210ENST00000539599 LOC102723971A0A1B0GUV8 181 aa11.8□□□□□ -0.52
UBE3B-210ENST00000539599 ST8SIA5O15466 376 aa11.8□□□□□ -0.52
UBE3B-210ENST00000539599 TLE4Q04727 773 aa11.8□□□□□ -0.52
UBE3B-210ENST00000539599 SPRNQ5BIV9 151 aa11.8□□□□□ -0.52
UBE3B-210ENST00000539599 FAM90A2PQ658T7 463 aa11.8□□□□□ -0.52
UBE3B-210ENST00000539599 SPNS3Q6ZMD2 512 aa11.8□□□□□ -0.52
UBE3B-210ENST00000539599 FER1L6-AS2Q96M78 137 aa11.8□□□□□ -0.52
UBE3B-210ENST00000539599 TUBA4BQ9H853 241 aa11.8□□□□□ -0.52
UBE3B-210ENST00000539599 SLC25A22Q9H936 323 aa11.8□□□□□ -0.52
UBE3B-210ENST00000539599 IFITM10A6NMD0 228 aa11.8□□□□□ -0.52
UBE3B-210ENST00000539599 CYB5BO43169 146 aa11.8□□□□□ -0.52
UBE3B-210ENST00000539599 HBZP02008 142 aa11.8□□□□□ -0.52
UBE3B-210ENST00000539599 NDUFA6P56556 154 aa11.8□□□□□ -0.52
UBE3B-210ENST00000539599 KIAA0141Q14154 515 aaPredicted RBP11.8□□□□□ -0.52
UBE3B-210ENST00000539599 PLA2G2CQ5R387 149 aa11.8□□□□□ -0.52
UBE3B-210ENST00000539599 LINC00596Q86U02 117 aa11.8□□□□□ -0.52
UBE3B-210ENST00000539599 C9orf106Q8NAJ2 232 aa11.8□□□□□ -0.52
UBE3B-210ENST00000539599 RAB40CQ96S21 281 aa11.8□□□□□ -0.52
UBE3B-210ENST00000539599 CEBPZOSA8MTT3 80 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 SH2D1BO14796 132 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 ZG16O60844 167 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 CD200P41217 278 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 TNFSF10P50591 281 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 GABRA6Q16445 453 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 OR13A1Q8NGR1 328 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 NIPSNAP3BQ9BS92 247 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 OPA3Q9H6K4 179 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 PLCE1Q9P212 2302 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 A0A1B0GW64 132 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 LINC00473A8K010 186 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 RBMXL2O75526 392 aaKnown RBP11.79□□□□□ -0.52
UBE3B-210ENST00000539599 CEACAM1P13688 526 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 IL2RGP31785 369 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 TFF3Q07654 80 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 ACSM6Q6P461 480 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 SSX9Q7RTT3 188 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 ZDHHC11Q9H8X9 412 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 MBNL3Q9NUK0 354 aaKnown RBP11.79□□□□□ -0.52
UBE3B-210ENST00000539599 CSMD1Q96PZ7 3565 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 ODAMA1E959 279 aa11.79□□□□□ -0.52
UBE3B-210ENST00000539599 GALR2O43603 387 aaPredicted RBP11.79□□□□□ -0.52
UBE3B-210ENST00000539599 DFFBO76075 338 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms