RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 WIPI2Q9Y4P8 454 aa7.42□□□□□ -1.22
GGA3-202ENST00000538886 HOXB5P09067 269 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 HOXA5P20719 270 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 NPBWR2P48146 333 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 VAMP2P63027 116 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 BTNL3Q6UXE8 466 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 Q8NFD4 153 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 RAB39BQ96DA2 213 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 SMIM3Q9BZL3 60 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 CHST5Q9GZS9 411 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 OR5V1Q9UGF6 321 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 KCNS2Q9ULS6 477 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 ARHGAP21Q5T5U3 1957 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 hCG_38984A0A1B0GV85 526 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 C20orf202A1L168 122 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 OR5B21A6NL26 309 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 RBMXL2O75526 392 aaKnown RBP7.41□□□□□ -1.22
GGA3-202ENST00000538886 IGHA1P01876 353 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 VSIG10L2P0DP72 767 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 UBE2KP61086 200 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 HES1Q14469 280 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 PIGYQ3MUY2 71 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 SPIN3Q5JUX0 258 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 NR2C2APQ86WQ0 139 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 CALHM1Q8IU99 346 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 OR5A2Q8NGI9 324 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 SNX22Q96L94 193 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 PNRC2Q9NPJ4 139 aaKnown RBP7.41□□□□□ -1.22
GGA3-202ENST00000538886 TEX15Q9BXT5 2789 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 OR2A4O95047 310 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 IGLV1-44P01699 117 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 AMY2AP04746 511 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 IFNA6P05013 189 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 MSMPQ1L6U9 139 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 CEACAM21Q3KPI0 293 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 ABHD5Q8WTS1 349 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 LYZL4Q96KX0 146 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 OR2A7Q96R45 310 aa7.41□□□□□ -1.22
GGA3-202ENST00000538886 A0A0U1RQV5 110 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 IGHV4-39P01824 125 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 ANOS1P23352 680 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 DAZAP2Q15038 168 aaPredicted RBP7.4□□□□□ -1.22
GGA3-202ENST00000538886 TESK1Q15569 626 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 RSPO1Q2MKA7 263 aaPredicted RBP7.4□□□□□ -1.22
GGA3-202ENST00000538886 FBXW12Q6X9E4 464 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 FAM3DQ96BQ1 224 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 DIRC2Q96SL1 478 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 C7orf69Q9H7B7 122 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 CNTD2Q9H8S5 307 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 IL19Q9UHD0 177 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 CPAMD8Q8IZJ3 1885 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 IGHV4-30-2A0A087WSY4 118 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 IGHV3-43A0A0B4J1X8 118 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 GABARAPH6UMI1 98 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 DFFBO76075 338 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 NDUFB6O95139 128 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 IGHV3-43DP0DP04 118 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 USF1P22415 310 aaPredicted RBP7.4□□□□□ -1.22
GGA3-202ENST00000538886 AESQ08117 197 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 C11orf87Q6NUJ2 197 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 DHRS11Q6UWP2 260 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 Q6ZRG5 221 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 FAM219AQ8IW50 185 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 DMBX1Q8NFW5 382 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 SPSB1Q96BD6 273 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 NTNG2Q96CW9 530 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 GCM1Q9NP62 436 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 IL36RNQ9UBH0 155 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 SLC25A10Q9UBX3 287 aaPredicted RBP7.4□□□□□ -1.22
GGA3-202ENST00000538886 ARFGEF3Q5TH69 2177 aa7.4□□□□□ -1.22
GGA3-202ENST00000538886 MLNRO43193 412 aa7.4□□□□□ -1.23
GGA3-202ENST00000538886 AKR1C4P17516 323 aa7.4□□□□□ -1.23
GGA3-202ENST00000538886 TMEM33P57088 247 aa7.4□□□□□ -1.23
GGA3-202ENST00000538886 RPL31P62899 125 aaKnown RBP7.4□□□□□ -1.23
GGA3-202ENST00000538886 OSR2Q8N2R0 312 aa7.4□□□□□ -1.23
GGA3-202ENST00000538886 C11orf42Q8N5U0 333 aa7.4□□□□□ -1.23
GGA3-202ENST00000538886 NUP37Q8NFH4 326 aa7.4□□□□□ -1.23
GGA3-202ENST00000538886 OR4A4PQ8NGN8 299 aa7.4□□□□□ -1.23
GGA3-202ENST00000538886 ABRACLQ9P1F3 81 aa7.4□□□□□ -1.23
GGA3-202ENST00000538886 J3QT63 122 aa7.39□□□□□ -1.23
GGA3-202ENST00000538886 GEMIN2O14893 280 aaKnown RBP7.39□□□□□ -1.23
GGA3-202ENST00000538886 ENSAO43768 121 aaKnown RBP7.39□□□□□ -1.23
GGA3-202ENST00000538886 FOLR2P14207 255 aa7.39□□□□□ -1.23
GGA3-202ENST00000538886 PRDX2P32119 198 aa7.39□□□□□ -1.23
GGA3-202ENST00000538886 TAGLN2P37802 199 aaKnown RBP7.39□□□□□ -1.23
GGA3-202ENST00000538886 OR3A1P47881 315 aa7.39□□□□□ -1.23
GGA3-202ENST00000538886 FXYD4P59646 89 aa7.39□□□□□ -1.23
GGA3-202ENST00000538886 IL13RA1P78552 427 aa7.39□□□□□ -1.23
GGA3-202ENST00000538886 DHODHQ02127 395 aa7.39□□□□□ -1.23
GGA3-202ENST00000538886 SPRNQ5BIV9 151 aa7.39□□□□□ -1.23
GGA3-202ENST00000538886 SOHLH1Q5JUK2 328 aa7.39□□□□□ -1.23
GGA3-202ENST00000538886 IL34Q6ZMJ4 242 aa7.39□□□□□ -1.23
GGA3-202ENST00000538886 Q6ZR03 302 aa7.39□□□□□ -1.23
GGA3-202ENST00000538886 C1orf174Q8IYL3 243 aa7.39□□□□□ -1.23
GGA3-202ENST00000538886 MITD1Q8WV92 249 aa7.39□□□□□ -1.23
GGA3-202ENST00000538886 DYRK2Q92630 601 aa7.39□□□□□ -1.23
GGA3-202ENST00000538886 PARD6GQ9BYG4 376 aaPredicted RBP7.39□□□□□ -1.23
GGA3-202ENST00000538886 DNAJC4Q9NNZ3 241 aa7.39□□□□□ -1.23
GGA3-202ENST00000538886 IGHV2-5P01817 119 aa7.39□□□□□ -1.23
GGA3-202ENST00000538886 IL5P05113 134 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms