RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 ZNF3P17036 446 aa6.67□□□□□ -1.34
CPSF7-217ENST00000537162 MAGEA2P43356 314 aa6.67□□□□□ -1.34
CPSF7-217ENST00000537162 RIDAP52758 137 aaKnown RBP6.67□□□□□ -1.34
CPSF7-217ENST00000537162 FAM3BP58499 235 aaPredicted RBP6.67□□□□□ -1.34
CPSF7-217ENST00000537162 ROM1Q03395 351 aa6.67□□□□□ -1.34
CPSF7-217ENST00000537162 SF3A3Q12874 501 aaKnown RBP eCLIP6.67□□□□□ -1.349e-6■■□□□ 12.4
CPSF7-217ENST00000537162 PIGYQ3MUY2 71 aa6.67□□□□□ -1.34
CPSF7-217ENST00000537162 MORN2Q502X0 79 aa6.67□□□□□ -1.34
CPSF7-217ENST00000537162 TNFAIP8L3Q5GJ75 292 aa6.67□□□□□ -1.34
CPSF7-217ENST00000537162 ZNF691Q5VV52 312 aa6.67□□□□□ -1.34
CPSF7-217ENST00000537162 ZNF679Q8IYX0 411 aa6.67□□□□□ -1.34
CPSF7-217ENST00000537162 PRR18Q8N4B5 295 aa6.67□□□□□ -1.34
CPSF7-217ENST00000537162 IQCF1Q8N6M8 205 aa6.67□□□□□ -1.34
CPSF7-217ENST00000537162 SUMF2Q8NBJ7 301 aa6.67□□□□□ -1.34
CPSF7-217ENST00000537162 BBS1Q8NFJ9 593 aa6.67□□□□□ -1.34
CPSF7-217ENST00000537162 OR9Q2Q8NGE9 314 aa6.67□□□□□ -1.34
CPSF7-217ENST00000537162 SH3GL1Q99961 368 aa6.67□□□□□ -1.34
CPSF7-217ENST00000537162 BTBD10Q9BSF8 475 aa6.67□□□□□ -1.34
CPSF7-217ENST00000537162 DPCDQ9BVM2 203 aaPredicted RBP6.67□□□□□ -1.34
CPSF7-217ENST00000537162 C6orf62Q9GZU0 229 aaPredicted RBP6.67□□□□□ -1.34
CPSF7-217ENST00000537162 C5orf66Q9H5L9 145 aa6.67□□□□□ -1.34
CPSF7-217ENST00000537162 CMC2Q9NRP2 79 aa6.67□□□□□ -1.34
CPSF7-217ENST00000537162 ING4Q9UNL4 249 aa6.67□□□□□ -1.34
CPSF7-217ENST00000537162 R4GMQ9 66 aa6.67□□□□□ -1.34
CPSF7-217ENST00000537162 A0A1B0GW64 132 aa6.66□□□□□ -1.34
CPSF7-217ENST00000537162 FAM223BA6NKX1 122 aa6.66□□□□□ -1.34
CPSF7-217ENST00000537162 H0YJW9 148 aa6.66□□□□□ -1.34
CPSF7-217ENST00000537162 ZNF254O75437 659 aa6.66□□□□□ -1.34
CPSF7-217ENST00000537162 TUSC2O75896 110 aa6.66□□□□□ -1.34
CPSF7-217ENST00000537162 IFNGP01579 166 aa6.66□□□□□ -1.34
CPSF7-217ENST00000537162 ATF1P18846 271 aa6.66□□□□□ -1.34
CPSF7-217ENST00000537162 CRISP1P54107 249 aa6.66□□□□□ -1.34
CPSF7-217ENST00000537162 IFFO1Q0D2I5 559 aa6.66□□□□□ -1.34
CPSF7-217ENST00000537162 ALKBH1Q13686 389 aaKnown RBP6.66□□□□□ -1.34
CPSF7-217ENST00000537162 RPL39P5Q59GN2 51 aa6.66□□□□□ -1.34
CPSF7-217ENST00000537162 LELP1Q5T871 98 aa6.66□□□□□ -1.34
CPSF7-217ENST00000537162 RPL13AP3Q6NVV1 102 aa6.66□□□□□ -1.34
CPSF7-217ENST00000537162 FAM223AQ8IWN6 122 aa6.66□□□□□ -1.34
CPSF7-217ENST00000537162 OR52L2PQ8NGH6 319 aa6.66□□□□□ -1.34
CPSF7-217ENST00000537162 OR10AC1Q8NH08 325 aa6.66□□□□□ -1.34
CPSF7-217ENST00000537162 EDARADDQ8WWZ3 215 aa6.66□□□□□ -1.34
CPSF7-217ENST00000537162 MRPS24Q96EL2 167 aaKnown RBP6.66□□□□□ -1.34
CPSF7-217ENST00000537162 CYYR1Q96J86 154 aa6.66□□□□□ -1.34
CPSF7-217ENST00000537162 ABHD14AQ9BUJ0 271 aa6.66□□□□□ -1.34
CPSF7-217ENST00000537162 NEK6Q9HC98 313 aa6.66□□□□□ -1.34
CPSF7-217ENST00000537162 IKZF2Q9UKS7 526 aa6.66□□□□□ -1.34
CPSF7-217ENST00000537162 TMED3Q9Y3Q3 217 aa6.66□□□□□ -1.34
CPSF7-217ENST00000537162 TMEM30CPA0ZSE6 113 aa6.65□□□□□ -1.34
CPSF7-217ENST00000537162 H7C2Y5 167 aa6.65□□□□□ -1.34
CPSF7-217ENST00000537162 SYT7O43581 403 aa6.65□□□□□ -1.34
CPSF7-217ENST00000537162 SULT1B1O43704 296 aa6.65□□□□□ -1.34
CPSF7-217ENST00000537162 E2F6O75461 281 aa6.65□□□□□ -1.34
CPSF7-217ENST00000537162 OR2J3O76001 311 aa6.65□□□□□ -1.34
CPSF7-217ENST00000537162 HBZP02008 142 aa6.65□□□□□ -1.34
CPSF7-217ENST00000537162 IGKV1-16P04430 117 aa6.65□□□□□ -1.34
CPSF7-217ENST00000537162 OR9G9P0C7N8 305 aa6.65□□□□□ -1.34
CPSF7-217ENST00000537162 ARL3P36405 182 aa6.65□□□□□ -1.34
CPSF7-217ENST00000537162 PPP1CCP36873 323 aaKnown RBP6.65□□□□□ -1.34
CPSF7-217ENST00000537162 C15orf32Q32M92 178 aa6.65□□□□□ -1.34
CPSF7-217ENST00000537162 SAMD4BQ5PRF9 694 aaKnown RBP6.65□□□□□ -1.34
CPSF7-217ENST00000537162 STEAP3Q658P3 488 aa6.65□□□□□ -1.34
CPSF7-217ENST00000537162 TMEM88Q6PEY1 159 aa6.65□□□□□ -1.34
CPSF7-217ENST00000537162 C19orf35Q6ZS72 473 aa6.65□□□□□ -1.34
CPSF7-217ENST00000537162 RASSF6Q6ZTQ3 369 aa6.65□□□□□ -1.34
CPSF7-217ENST00000537162 OR2T33Q8NG76 320 aa6.65□□□□□ -1.34
CPSF7-217ENST00000537162 FAM210BQ96KR6 192 aa6.65□□□□□ -1.34
CPSF7-217ENST00000537162 ATP6V1G3Q96LB4 118 aa6.65□□□□□ -1.34
CPSF7-217ENST00000537162 TMBIM4Q9HC24 238 aa6.65□□□□□ -1.34
CPSF7-217ENST00000537162 CMTM6Q9NX76 183 aa6.65□□□□□ -1.34
CPSF7-217ENST00000537162 MRPL27Q9P0M9 148 aaKnown RBP6.65□□□□□ -1.34
CPSF7-217ENST00000537162 ZNF221Q9UK13 617 aa6.65□□□□□ -1.34
CPSF7-217ENST00000537162 SNX5Q9Y5X3 404 aa6.65□□□□□ -1.34
CPSF7-217ENST00000537162 TNXBP22105 4242 aa6.65□□□□□ -1.35
CPSF7-217ENST00000537162 IGHV3-35A0A0C4DH35 117 aa6.64□□□□□ -1.35
CPSF7-217ENST00000537162 OR4C46A6NHA9 309 aa6.64□□□□□ -1.35
CPSF7-217ENST00000537162 SERPINA3P01011 423 aa6.64□□□□□ -1.35
CPSF7-217ENST00000537162 GASTP01350 101 aa6.64□□□□□ -1.35
CPSF7-217ENST00000537162 IGLV2-23P01705 113 aa6.64□□□□□ -1.35
CPSF7-217ENST00000537162 MT-ND4P03905 459 aa6.64□□□□□ -1.35
CPSF7-217ENST00000537162 HTN3P15516 51 aa6.64□□□□□ -1.35
CPSF7-217ENST00000537162 NPY1RP25929 384 aa6.64□□□□□ -1.35
CPSF7-217ENST00000537162 KCNJ3P48549 501 aa6.64□□□□□ -1.35
CPSF7-217ENST00000537162 ZSCAN26Q16670 478 aa6.64□□□□□ -1.35
CPSF7-217ENST00000537162 FAM106AQ4KMX7 169 aa6.64□□□□□ -1.35
CPSF7-217ENST00000537162 CLEC19AQ6UXS0 136 aa6.64□□□□□ -1.35
CPSF7-217ENST00000537162 SERPINA12Q8IW75 414 aa6.64□□□□□ -1.35
CPSF7-217ENST00000537162 SAXO1Q8IYX7 474 aa6.64□□□□□ -1.35
CPSF7-217ENST00000537162 TLCD1Q96CP7 247 aa6.64□□□□□ -1.35
CPSF7-217ENST00000537162 OPALINQ96PE5 141 aa6.64□□□□□ -1.35
CPSF7-217ENST00000537162 ATG101Q9BSB4 218 aa6.64□□□□□ -1.35
CPSF7-217ENST00000537162 ALG8Q9BVK2 526 aa6.64□□□□□ -1.35
CPSF7-217ENST00000537162 YIPF3Q9GZM5 350 aa6.64□□□□□ -1.35
CPSF7-217ENST00000537162 MOB1AQ9H8S9 216 aa6.64□□□□□ -1.35
CPSF7-217ENST00000537162 RHOFQ9HBH0 211 aa6.64□□□□□ -1.35
CPSF7-217ENST00000537162 CLEC5AQ9NY25 188 aa6.64□□□□□ -1.35
CPSF7-217ENST00000537162 SAMD4AQ9UPU9 718 aaKnown RBP6.64□□□□□ -1.35
CPSF7-217ENST00000537162 RGS16O15492 202 aaPredicted RBP6.63□□□□□ -1.35
CPSF7-217ENST00000537162 PRODHO43272 600 aa6.63□□□□□ -1.35
CPSF7-217ENST00000537162 PLA2G1BP04054 148 aaKnown RBP6.63□□□□□ -1.35
CPSF7-217ENST00000537162 CRYGBP07316 175 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 1118 ms