RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 CTF1Q16619 201 aa17.72■□□□□ 0.43
VPS37C-202ENST00000535818 SRSF7Q16629 238 aaKnown RBP eCLIP17.72■□□□□ 0.43
VPS37C-202ENST00000535818 Q6ZS46 218 aa17.72■□□□□ 0.43
VPS37C-202ENST00000535818 CLVS1Q8IUQ0 354 aaPredicted RBP17.72■□□□□ 0.43
VPS37C-202ENST00000535818 ODF3L1Q8IXM7 274 aa17.72■□□□□ 0.43
VPS37C-202ENST00000535818 SLC25A38Q96DW6 304 aa17.72■□□□□ 0.43
VPS37C-202ENST00000535818 S100A16Q96FQ6 103 aaKnown RBP17.72■□□□□ 0.43
VPS37C-202ENST00000535818 PARP12Q9H0J9 701 aaKnown RBP17.72■□□□□ 0.43
VPS37C-202ENST00000535818 DCSTAMPQ9H295 470 aa17.72■□□□□ 0.43
VPS37C-202ENST00000535818 IFI27L2Q9H2X8 130 aa17.72■□□□□ 0.43
VPS37C-202ENST00000535818 TMEM235A6NFC5 223 aa17.71■□□□□ 0.43
VPS37C-202ENST00000535818 SH2D7A6NKC9 451 aaPredicted RBP17.71■□□□□ 0.43
VPS37C-202ENST00000535818 BET1O15155 118 aa17.71■□□□□ 0.43
VPS37C-202ENST00000535818 DIRAS3O95661 229 aa17.71■□□□□ 0.43
VPS37C-202ENST00000535818 OR3A3P47888 321 aa17.71■□□□□ 0.43
VPS37C-202ENST00000535818 TMBIM6P55061 237 aa17.71■□□□□ 0.43
VPS37C-202ENST00000535818 TMEM95Q3KNT9 176 aa17.71■□□□□ 0.43
VPS37C-202ENST00000535818 HACD4Q5VWC8 232 aa17.71■□□□□ 0.43
VPS37C-202ENST00000535818 MZT2AQ6P582 158 aa17.71■□□□□ 0.43
VPS37C-202ENST00000535818 EAF1Q96JC9 268 aaPredicted RBP17.71■□□□□ 0.43
VPS37C-202ENST00000535818 CMTM3Q96MX0 182 aa17.71■□□□□ 0.43
VPS37C-202ENST00000535818 S1PR3Q99500 378 aa17.71■□□□□ 0.43
VPS37C-202ENST00000535818 ABCG5Q9H222 651 aa17.71■□□□□ 0.43
VPS37C-202ENST00000535818 SERTAD4Q9NUC0 356 aa17.71■□□□□ 0.43
VPS37C-202ENST00000535818 IGKV1-6A0A0C4DH72 117 aa17.7■□□□□ 0.42
VPS37C-202ENST00000535818 ITGB1BP1O14713 200 aa17.7■□□□□ 0.42
VPS37C-202ENST00000535818 RAB29O14966 203 aa17.7■□□□□ 0.42
VPS37C-202ENST00000535818 MOSP00540 346 aa17.7■□□□□ 0.42
VPS37C-202ENST00000535818 GSTT2P0CG29 244 aa17.7■□□□□ 0.42
VPS37C-202ENST00000535818 GSTT2BP0CG30 244 aa17.7■□□□□ 0.42
VPS37C-202ENST00000535818 SOX6P35712 828 aa17.7■□□□□ 0.42
VPS37C-202ENST00000535818 EBI3Q14213 229 aa17.7■□□□□ 0.42
VPS37C-202ENST00000535818 HERPUD1Q15011 391 aa17.7■□□□□ 0.42
VPS37C-202ENST00000535818 ZNF260Q3ZCT1 412 aa17.7■□□□□ 0.42
VPS37C-202ENST00000535818 ZNF833PQ6ZTB9 187 aa17.7■□□□□ 0.42
VPS37C-202ENST00000535818 OR10J5Q8NHC4 309 aa17.7■□□□□ 0.42
VPS37C-202ENST00000535818 NUDCD2Q8WVJ2 157 aa17.7■□□□□ 0.42
VPS37C-202ENST00000535818 CABLES2Q9BTV7 478 aa17.7■□□□□ 0.42
VPS37C-202ENST00000535818 MRPL20Q9BYC9 149 aaKnown RBP17.7■□□□□ 0.42
VPS37C-202ENST00000535818 C11orf54Q9H0W9 315 aaPredicted RBP17.7■□□□□ 0.42
VPS37C-202ENST00000535818 RDH8Q9NYR8 311 aa17.7■□□□□ 0.42
VPS37C-202ENST00000535818 TRAV18A0A075B6X5 111 aa17.69■□□□□ 0.42
VPS37C-202ENST00000535818 NCBP2LA6PVI3 153 aaKnown RBP17.69■□□□□ 0.42
VPS37C-202ENST00000535818 ZNF736B4DX44 427 aaPredicted RBP17.69■□□□□ 0.42
VPS37C-202ENST00000535818 FGF16O43320 207 aa17.69■□□□□ 0.42
VPS37C-202ENST00000535818 LSAMPQ13449 338 aa17.69■□□□□ 0.42
VPS37C-202ENST00000535818 IGSF11Q5DX21 431 aa17.69■□□□□ 0.42
VPS37C-202ENST00000535818 FAM71F2Q6NXP2 309 aa17.69■□□□□ 0.42
VPS37C-202ENST00000535818 SAMD12Q8N8I0 201 aa17.69■□□□□ 0.42
VPS37C-202ENST00000535818 ABHD14BQ96IU4 210 aa17.69■□□□□ 0.42
VPS37C-202ENST00000535818 ST6GALNAC5Q9BVH7 336 aa17.69■□□□□ 0.42
VPS37C-202ENST00000535818 NAA50Q9GZZ1 169 aaKnown RBP17.69■□□□□ 0.42
VPS37C-202ENST00000535818 GHITMQ9H3K2 345 aa17.69■□□□□ 0.42
VPS37C-202ENST00000535818 AMY1AP04745 511 aa17.68■□□□□ 0.42
VPS37C-202ENST00000535818 AMY2AP04746 511 aa17.68■□□□□ 0.42
VPS37C-202ENST00000535818 RPL39P5Q59GN2 51 aa17.68■□□□□ 0.42
VPS37C-202ENST00000535818 Q6ZS49 121 aa17.68■□□□□ 0.42
VPS37C-202ENST00000535818 C5orf56Q8N8D9 126 aa17.68■□□□□ 0.42
VPS37C-202ENST00000535818 C11orf44Q8N8P7 122 aa17.68■□□□□ 0.42
VPS37C-202ENST00000535818 NABP2Q9BQ15 211 aa17.68■□□□□ 0.42
VPS37C-202ENST00000535818 GINS4Q9BRT9 223 aa17.68■□□□□ 0.42
VPS37C-202ENST00000535818 ZNF221Q9UK13 617 aa17.68■□□□□ 0.42
VPS37C-202ENST00000535818 SMIM31A0A1B0GVY4 71 aa17.67■□□□□ 0.42
VPS37C-202ENST00000535818 ZNF182P17025 639 aaPredicted RBP17.67■□□□□ 0.42
VPS37C-202ENST00000535818 RNF150Q9ULK6 438 aa17.67■□□□□ 0.42
VPS37C-202ENST00000535818 TRBV6-7A0A0A0MS04 114 aa17.66■□□□□ 0.42
VPS37C-202ENST00000535818 M0QZ24 198 aa17.66■□□□□ 0.42
VPS37C-202ENST00000535818 XRCC3O43542 346 aa17.66■□□□□ 0.42
VPS37C-202ENST00000535818 APOA1P02647 267 aa17.66■□□□□ 0.42
VPS37C-202ENST00000535818 GPR12P47775 334 aa17.66■□□□□ 0.42
VPS37C-202ENST00000535818 Q8N6K4 173 aa17.66■□□□□ 0.42
VPS37C-202ENST00000535818 AGMATQ9BSE5 352 aa17.66■□□□□ 0.42
VPS37C-202ENST00000535818 COMMD3Q9UBI1 195 aa17.66■□□□□ 0.42
VPS37C-202ENST00000535818 RBM7Q9Y580 266 aaKnown RBP17.66■□□□□ 0.42
VPS37C-202ENST00000535818 IGKV1D-8A0A087WSZ0 117 aa17.65■□□□□ 0.42
VPS37C-202ENST00000535818 FBXO24O75426 580 aa17.65■□□□□ 0.42
VPS37C-202ENST00000535818 CTXN2P0C2S0 81 aa17.65■□□□□ 0.42
VPS37C-202ENST00000535818 CBX5P45973 191 aa17.65■□□□□ 0.42
VPS37C-202ENST00000535818 TMEM69Q5SWH9 247 aa17.65■□□□□ 0.42
VPS37C-202ENST00000535818 OR8H1Q8NGG4 311 aa17.65■□□□□ 0.42
VPS37C-202ENST00000535818 RBMXL1Q96E39 390 aaKnown RBP17.65■□□□□ 0.42
VPS37C-202ENST00000535818 ZNF251Q9BRH9 671 aa17.65■□□□□ 0.42
VPS37C-202ENST00000535818 WNT10AQ9GZT5 417 aa17.65■□□□□ 0.42
VPS37C-202ENST00000535818 TOLLIPQ9H0E2 274 aa17.65■□□□□ 0.42
VPS37C-202ENST00000535818 SSX5O60225 188 aa17.64■□□□□ 0.41
VPS37C-202ENST00000535818 PRR31Q5SQ13 230 aa17.64■□□□□ 0.41
VPS37C-202ENST00000535818 FAM131AQ6UXB0 335 aa17.64■□□□□ 0.41
VPS37C-202ENST00000535818 CENPVQ7Z7K6 275 aaPredicted RBP17.64■□□□□ 0.41
VPS37C-202ENST00000535818 RASL11BQ9BPW5 248 aa17.64■□□□□ 0.41
VPS37C-202ENST00000535818 AUNIPQ9H7T9 357 aa17.64■□□□□ 0.41
VPS37C-202ENST00000535818 OR8U9P0C7N5 309 aa17.63■□□□□ 0.41
VPS37C-202ENST00000535818 MMDQ15546 238 aa17.63■□□□□ 0.41
VPS37C-202ENST00000535818 Q8N9W7 124 aa17.63■□□□□ 0.41
VPS37C-202ENST00000535818 OR8U1Q8NH10 309 aa17.63■□□□□ 0.41
VPS37C-202ENST00000535818 OR2D2Q9H210 308 aa17.63■□□□□ 0.41
VPS37C-202ENST00000535818 LIN7CQ9NUP9 197 aaKnown RBP17.63■□□□□ 0.41
VPS37C-202ENST00000535818 OR5H14A6NHG9 310 aa17.62■□□□□ 0.41
VPS37C-202ENST00000535818 CT45A6P0DMU7 189 aa17.62■□□□□ 0.41
VPS37C-202ENST00000535818 CT45A5P0DMU8 189 aa17.62■□□□□ 0.41
VPS37C-202ENST00000535818 CT45A7P0DMV0 189 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms