RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 ISYNA1Q9NPH2 558 aa10.35□□□□□ -0.75
CLSTN3-205ENST00000535452 ZNF355PQ9NSJ1 428 aa10.35□□□□□ -0.75
CLSTN3-205ENST00000535452 SLC23A1Q9UHI7 598 aa10.35□□□□□ -0.75
CLSTN3-205ENST00000535452 SLC22A1O15245 554 aa10.34□□□□□ -0.75
CLSTN3-205ENST00000535452 OR8U9P0C7N5 309 aa10.34□□□□□ -0.75
CLSTN3-205ENST00000535452 ARSBP15848 533 aa10.34□□□□□ -0.75
CLSTN3-205ENST00000535452 VHLP40337 213 aa10.34□□□□□ -0.75
CLSTN3-205ENST00000535452 RPS27AP62979 156 aaKnown RBP10.34□□□□□ -0.75
CLSTN3-205ENST00000535452 RUNX1Q01196 453 aa10.34□□□□□ -0.75
CLSTN3-205ENST00000535452 CFHR3Q02985 330 aa10.34□□□□□ -0.75
CLSTN3-205ENST00000535452 GNMTQ14749 295 aa10.34□□□□□ -0.75
CLSTN3-205ENST00000535452 HMGN3Q15651 99 aa10.34□□□□□ -0.75
CLSTN3-205ENST00000535452 ACTBL2Q562R1 376 aa10.34□□□□□ -0.75
CLSTN3-205ENST00000535452 FAM131AQ6UXB0 335 aa10.34□□□□□ -0.75
CLSTN3-205ENST00000535452 CEACAM19Q7Z692 300 aa10.34□□□□□ -0.75
CLSTN3-205ENST00000535452 NANOGP1Q8N7R0 232 aa10.34□□□□□ -0.75
CLSTN3-205ENST00000535452 ZNF491Q8N8L2 437 aa10.34□□□□□ -0.75
CLSTN3-205ENST00000535452 NPBQ8NG41 125 aa10.34□□□□□ -0.75
CLSTN3-205ENST00000535452 FAAP24Q9BTP7 215 aa10.34□□□□□ -0.75
CLSTN3-205ENST00000535452 SLA2Q9H6Q3 261 aa10.34□□□□□ -0.75
CLSTN3-205ENST00000535452 PSORS1C1Q9UIG5 152 aa10.34□□□□□ -0.75
CLSTN3-205ENST00000535452 PTGES3LE9PB15 166 aa10.33□□□□□ -0.76
CLSTN3-205ENST00000535452 G3V318 75 aa10.33□□□□□ -0.76
CLSTN3-205ENST00000535452 C3orf84H3BNL1 204 aa10.33□□□□□ -0.76
CLSTN3-205ENST00000535452 RRHO14718 337 aa10.33□□□□□ -0.76
CLSTN3-205ENST00000535452 ST8SIA5O15466 376 aa10.33□□□□□ -0.76
CLSTN3-205ENST00000535452 CNIH1O95406 144 aa10.33□□□□□ -0.76
CLSTN3-205ENST00000535452 VSIG8P0DPA2 414 aa10.33□□□□□ -0.76
CLSTN3-205ENST00000535452 SRMP19623 302 aa10.33□□□□□ -0.76
CLSTN3-205ENST00000535452 PSMA1P25786 263 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-205ENST00000535452 CHATP28329 748 aa10.33□□□□□ -0.76
CLSTN3-205ENST00000535452 OR3A3P47888 321 aa10.33□□□□□ -0.76
CLSTN3-205ENST00000535452 PSMD7P51665 324 aa10.33□□□□□ -0.76
CLSTN3-205ENST00000535452 FHL3Q13643 280 aa10.33□□□□□ -0.76
CLSTN3-205ENST00000535452 FAM53AQ6NSI3 398 aaPredicted RBP10.33□□□□□ -0.76
CLSTN3-205ENST00000535452 UNQ5815/PRO19632Q6UWF5 114 aa10.33□□□□□ -0.76
CLSTN3-205ENST00000535452 C6orf201Q7Z4U5 140 aa10.33□□□□□ -0.76
CLSTN3-205ENST00000535452 CENPOQ9BU64 300 aa10.33□□□□□ -0.76
CLSTN3-205ENST00000535452 C12orf4Q9NQ89 552 aa10.33□□□□□ -0.76
CLSTN3-205ENST00000535452 PLCXD1Q9NUJ7 323 aa10.33□□□□□ -0.76
CLSTN3-205ENST00000535452 TPRKBQ9Y3C4 175 aa10.33□□□□□ -0.76
CLSTN3-205ENST00000535452 RBM7Q9Y580 266 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-205ENST00000535452 IGHV7-81A0A0B4J1V7 117 aa10.32□□□□□ -0.76
CLSTN3-205ENST00000535452 C13orf42A0A1B0GVH6 325 aa10.32□□□□□ -0.76
CLSTN3-205ENST00000535452 TFAP2AP05549 437 aa10.32□□□□□ -0.76
CLSTN3-205ENST00000535452 HSMCR30P0CW71 290 aa10.32□□□□□ -0.76
CLSTN3-205ENST00000535452 CEACAM6P40199 344 aa10.32□□□□□ -0.76
CLSTN3-205ENST00000535452 TPPP2P59282 170 aa10.32□□□□□ -0.76
CLSTN3-205ENST00000535452 RPS16P62249 146 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-205ENST00000535452 SPHARQ15513 63 aa10.32□□□□□ -0.76
CLSTN3-205ENST00000535452 TATDN3Q17R31 274 aa10.32□□□□□ -0.76
CLSTN3-205ENST00000535452 PPP1R27Q86WC6 154 aa10.32□□□□□ -0.76
CLSTN3-205ENST00000535452 ANKRD13BQ86YJ7 626 aa10.32□□□□□ -0.76
CLSTN3-205ENST00000535452 ASCL2Q99929 193 aa10.32□□□□□ -0.76
CLSTN3-205ENST00000535452 SULT4A1Q9BR01 284 aa10.32□□□□□ -0.76
CLSTN3-205ENST00000535452 RSRP1Q9BUV0 290 aa10.32□□□□□ -0.76
CLSTN3-205ENST00000535452 FBXL15Q9H469 300 aa10.32□□□□□ -0.76
CLSTN3-205ENST00000535452 GNB4Q9HAV0 340 aa10.32□□□□□ -0.76
CLSTN3-205ENST00000535452 METTL1Q9UBP6 276 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-205ENST00000535452 A0A0G2JLM5 398 aa10.31□□□□□ -0.76
CLSTN3-205ENST00000535452 ITGB1BP1O14713 200 aa10.31□□□□□ -0.76
CLSTN3-205ENST00000535452 NDUFA3O95167 84 aa10.31□□□□□ -0.76
CLSTN3-205ENST00000535452 SPDEFO95238 335 aa10.31□□□□□ -0.76
CLSTN3-205ENST00000535452 IGLV1-40P01703 118 aa10.31□□□□□ -0.76
CLSTN3-205ENST00000535452 HSPB1P04792 205 aaKnown RBP10.31□□□□□ -0.76
CLSTN3-205ENST00000535452 CDK1P06493 297 aa10.31□□□□□ -0.76
CLSTN3-205ENST00000535452 LGALS1P09382 135 aaKnown RBP10.31□□□□□ -0.76
CLSTN3-205ENST00000535452 ZP3P21754 424 aa10.31□□□□□ -0.76
CLSTN3-205ENST00000535452 PPIFP30405 207 aaKnown RBP10.31□□□□□ -0.76
CLSTN3-205ENST00000535452 SERPINB10P48595 397 aa10.31□□□□□ -0.76
CLSTN3-205ENST00000535452 HLA-DRB3P79483 266 aa10.31□□□□□ -0.76
CLSTN3-205ENST00000535452 RAB11BQ15907 218 aa10.31□□□□□ -0.76
CLSTN3-205ENST00000535452 SIGIRRQ6IA17 410 aa10.31□□□□□ -0.76
CLSTN3-205ENST00000535452 OR10K2Q6IF99 312 aa10.31□□□□□ -0.76
CLSTN3-205ENST00000535452 SVOPQ8N4V2 548 aa10.31□□□□□ -0.76
CLSTN3-205ENST00000535452 DCUN1D4Q92564 292 aa10.31□□□□□ -0.76
CLSTN3-205ENST00000535452 CLCC1Q96S66 551 aa10.31□□□□□ -0.76
CLSTN3-205ENST00000535452 CMSS1Q9BQ75 279 aaKnown RBP10.31□□□□□ -0.76
CLSTN3-205ENST00000535452 TM2D1Q9BX74 207 aa10.31□□□□□ -0.76
CLSTN3-205ENST00000535452 CCDC90BQ9GZT6 254 aa10.31□□□□□ -0.76
CLSTN3-205ENST00000535452 KLK15Q9H2R5 256 aa10.31□□□□□ -0.76
CLSTN3-205ENST00000535452 LSM4Q9Y4Z0 139 aaKnown RBP10.31□□□□□ -0.76
CLSTN3-205ENST00000535452 I3L521 148 aa10.3□□□□□ -0.76
CLSTN3-205ENST00000535452 TRGV3P03979 118 aa10.3□□□□□ -0.76
CLSTN3-205ENST00000535452 CD3GP09693 182 aa10.3□□□□□ -0.76
CLSTN3-205ENST00000535452 GADD45AP24522 165 aa10.3□□□□□ -0.76
CLSTN3-205ENST00000535452 CNTFRP26992 372 aa10.3□□□□□ -0.76
CLSTN3-205ENST00000535452 LGALS7P47929 136 aa10.3□□□□□ -0.76
CLSTN3-205ENST00000535452 GNB1P62873 340 aa10.3□□□□□ -0.76
CLSTN3-205ENST00000535452 CX3CL1P78423 397 aa10.3□□□□□ -0.76
CLSTN3-205ENST00000535452 AKIRIN2Q53H80 203 aa10.3□□□□□ -0.76
CLSTN3-205ENST00000535452 C1orf100Q5SVJ3 147 aa10.3□□□□□ -0.76
CLSTN3-205ENST00000535452 RNLSQ5VYX0 342 aa10.3□□□□□ -0.76
CLSTN3-205ENST00000535452 PDPNQ86YL7 162 aa10.3□□□□□ -0.76
CLSTN3-205ENST00000535452 SGPP2Q8IWX5 399 aa10.3□□□□□ -0.76
CLSTN3-205ENST00000535452 ODF3L1Q8IXM7 274 aa10.3□□□□□ -0.76
CLSTN3-205ENST00000535452 MINDY2Q8NBR6 621 aa10.3□□□□□ -0.76
CLSTN3-205ENST00000535452 ZNF485Q8NCK3 441 aa10.3□□□□□ -0.76
CLSTN3-205ENST00000535452 OR56B1Q8NGI3 324 aa10.3□□□□□ -0.76
CLSTN3-205ENST00000535452 ARPC1AQ92747 370 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms