RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 CD69Q07108 199 aa12.65□□□□□ -0.38
CLSTN3-204ENST00000535313 TPBGQ13641 420 aa12.65□□□□□ -0.38
CLSTN3-204ENST00000535313 P2RY14Q15391 338 aa12.65□□□□□ -0.38
CLSTN3-204ENST00000535313 C5orf64Q2M2E5 130 aa12.65□□□□□ -0.38
CLSTN3-204ENST00000535313 LIN54Q6MZP7 749 aa12.65□□□□□ -0.38
CLSTN3-204ENST00000535313 ZNF880Q6PDB4 577 aa12.65□□□□□ -0.38
CLSTN3-204ENST00000535313 CNBD2Q96M20 576 aa12.65□□□□□ -0.38
CLSTN3-204ENST00000535313 MGAT4AQ9UM21 535 aa12.65□□□□□ -0.38
CLSTN3-204ENST00000535313 A0A0A6YYD4 124 aa12.64□□□□□ -0.39
CLSTN3-204ENST00000535313 IGHV7-81A0A0B4J1V7 117 aa12.64□□□□□ -0.39
CLSTN3-204ENST00000535313 SLC17A2O00624 439 aa12.64□□□□□ -0.39
CLSTN3-204ENST00000535313 ATP6V0E1O15342 81 aa12.64□□□□□ -0.39
CLSTN3-204ENST00000535313 RAMP3O60896 148 aa12.64□□□□□ -0.39
CLSTN3-204ENST00000535313 PSMA1P25786 263 aaKnown RBP12.64□□□□□ -0.39
CLSTN3-204ENST00000535313 RANBP1P43487 201 aa12.64□□□□□ -0.39
CLSTN3-204ENST00000535313 RPS25P62851 125 aaKnown RBP12.64□□□□□ -0.39
CLSTN3-204ENST00000535313 RAB11BQ15907 218 aa12.64□□□□□ -0.39
CLSTN3-204ENST00000535313 C9orf66Q5T8R8 295 aa12.64□□□□□ -0.39
CLSTN3-204ENST00000535313 TMEM91Q6ZNR0 172 aa12.64□□□□□ -0.39
CLSTN3-204ENST00000535313 NPBQ8NG41 125 aa12.64□□□□□ -0.39
CLSTN3-204ENST00000535313 CCDC90BQ9GZT6 254 aa12.64□□□□□ -0.39
CLSTN3-204ENST00000535313 LPAR5Q9H1C0 372 aa12.64□□□□□ -0.39
CLSTN3-204ENST00000535313 GHITMQ9H3K2 345 aa12.64□□□□□ -0.39
CLSTN3-204ENST00000535313 DUSP21Q9H596 190 aa12.64□□□□□ -0.39
CLSTN3-204ENST00000535313 ISYNA1Q9NPH2 558 aa12.64□□□□□ -0.39
CLSTN3-204ENST00000535313 AK3Q9UIJ7 227 aa12.64□□□□□ -0.39
CLSTN3-204ENST00000535313 AK6Q9Y3D8 172 aaKnown RBP12.64□□□□□ -0.39
CLSTN3-204ENST00000535313 COL7A1Q02388 2944 aa12.64□□□□□ -0.39
CLSTN3-204ENST00000535313 DNAH9Q9NYC9 4486 aa12.63□□□□□ -0.39
CLSTN3-204ENST00000535313 TRBV6-6A0A0A6YYG2 114 aa12.63□□□□□ -0.39
CLSTN3-204ENST00000535313 TRAV41A0A0B4J266 112 aa12.63□□□□□ -0.39
CLSTN3-204ENST00000535313 SEC14L6B5MCN3 397 aa12.63□□□□□ -0.39
CLSTN3-204ENST00000535313 G3V318 75 aa12.63□□□□□ -0.39
CLSTN3-204ENST00000535313 SOCS1O15524 211 aa12.63□□□□□ -0.39
CLSTN3-204ENST00000535313 HSPA12AO43301 675 aa12.63□□□□□ -0.39
CLSTN3-204ENST00000535313 ZBTB25P24278 435 aa12.63□□□□□ -0.39
CLSTN3-204ENST00000535313 PPIFP30405 207 aaKnown RBP12.63□□□□□ -0.39
CLSTN3-204ENST00000535313 LUMP51884 338 aaPredicted RBP12.63□□□□□ -0.39
CLSTN3-204ENST00000535313 MLLT11Q13015 90 aaPredicted RBP12.63□□□□□ -0.39
CLSTN3-204ENST00000535313 RPL39P5Q59GN2 51 aa12.63□□□□□ -0.39
CLSTN3-204ENST00000535313 FAM131AQ6UXB0 335 aa12.63□□□□□ -0.39
CLSTN3-204ENST00000535313 FAM89BQ8N5H3 189 aa12.63□□□□□ -0.39
CLSTN3-204ENST00000535313 OR11H1Q8NG94 326 aa12.63□□□□□ -0.39
CLSTN3-204ENST00000535313 MYOZ3Q8TDC0 251 aa12.63□□□□□ -0.39
CLSTN3-204ENST00000535313 EDARADDQ8WWZ3 215 aa12.63□□□□□ -0.39
CLSTN3-204ENST00000535313 UBE2E2Q96LR5 201 aa12.63□□□□□ -0.39
CLSTN3-204ENST00000535313 B9D2Q9BPU9 175 aa12.63□□□□□ -0.39
CLSTN3-204ENST00000535313 KLK15Q9H2R5 256 aa12.63□□□□□ -0.39
CLSTN3-204ENST00000535313 HSF4Q9ULV5 492 aa12.63□□□□□ -0.39
CLSTN3-204ENST00000535313 VSIG4Q9Y279 399 aa12.63□□□□□ -0.39
CLSTN3-204ENST00000535313 OR5H14A6NHG9 310 aa12.62□□□□□ -0.39
CLSTN3-204ENST00000535313 ITGB1BP1O14713 200 aa12.62□□□□□ -0.39
CLSTN3-204ENST00000535313 NDUFA3O95167 84 aa12.62□□□□□ -0.39
CLSTN3-204ENST00000535313 IGLV1-40P01703 118 aa12.62□□□□□ -0.39
CLSTN3-204ENST00000535313 GSTP1P09211 210 aaKnown RBP12.62□□□□□ -0.39
CLSTN3-204ENST00000535313 CT45A6P0DMU7 189 aa12.62□□□□□ -0.39
CLSTN3-204ENST00000535313 CT45A5P0DMU8 189 aa12.62□□□□□ -0.39
CLSTN3-204ENST00000535313 CT45A7P0DMV0 189 aa12.62□□□□□ -0.39
CLSTN3-204ENST00000535313 CPEP16870 476 aa12.62□□□□□ -0.39
CLSTN3-204ENST00000535313 CRHBPP24387 322 aa12.62□□□□□ -0.39
CLSTN3-204ENST00000535313 CALRP27797 417 aaKnown RBP12.62□□□□□ -0.39
CLSTN3-204ENST00000535313 MC5RP33032 325 aa12.62□□□□□ -0.39
CLSTN3-204ENST00000535313 CEACAM6P40199 344 aa12.62□□□□□ -0.39
CLSTN3-204ENST00000535313 HLA-DRB3P79483 266 aa12.62□□□□□ -0.39
CLSTN3-204ENST00000535313 FHL3Q13643 280 aa12.62□□□□□ -0.39
CLSTN3-204ENST00000535313 PLGLAQ15195 96 aa12.62□□□□□ -0.39
CLSTN3-204ENST00000535313 OR1N2Q8NGR9 330 aa12.62□□□□□ -0.39
CLSTN3-204ENST00000535313 ABHD14BQ96IU4 210 aa12.62□□□□□ -0.39
CLSTN3-204ENST00000535313 GFI1Q99684 422 aa12.62□□□□□ -0.39
CLSTN3-204ENST00000535313 HDHD3Q9BSH5 251 aaPredicted RBP12.62□□□□□ -0.39
CLSTN3-204ENST00000535313 C12orf4Q9NQ89 552 aa12.62□□□□□ -0.39
CLSTN3-204ENST00000535313 H7C2Y5 167 aa12.61□□□□□ -0.39
CLSTN3-204ENST00000535313 RBBP9O75884 186 aa12.61□□□□□ -0.39
CLSTN3-204ENST00000535313 OR8U8P0C7N1 319 aa12.61□□□□□ -0.39
CLSTN3-204ENST00000535313 VEGFCP49767 419 aa12.61□□□□□ -0.39
CLSTN3-204ENST00000535313 RAB9AP51151 201 aa12.61□□□□□ -0.39
CLSTN3-204ENST00000535313 PSMD7P51665 324 aa12.61□□□□□ -0.39
CLSTN3-204ENST00000535313 ZNF660Q6AZW8 331 aaPredicted RBP12.61□□□□□ -0.39
CLSTN3-204ENST00000535313 C11orf87Q6NUJ2 197 aa12.61□□□□□ -0.39
CLSTN3-204ENST00000535313 GLDNQ6ZMI3 551 aaPredicted RBP12.61□□□□□ -0.39
CLSTN3-204ENST00000535313 PRSS48Q7RTY5 328 aa12.61□□□□□ -0.39
CLSTN3-204ENST00000535313 ZNF491Q8N8L2 437 aa12.61□□□□□ -0.39
CLSTN3-204ENST00000535313 MGLLQ99685 303 aa12.61□□□□□ -0.39
CLSTN3-204ENST00000535313 CMSS1Q9BQ75 279 aaKnown RBP12.61□□□□□ -0.39
CLSTN3-204ENST00000535313 PARP12Q9H0J9 701 aaKnown RBP12.61□□□□□ -0.39
CLSTN3-204ENST00000535313 FBXL15Q9H469 300 aa12.61□□□□□ -0.39
CLSTN3-204ENST00000535313 OR1A1Q9P1Q5 309 aa12.61□□□□□ -0.39
CLSTN3-204ENST00000535313 WASHC3Q9Y3C0 194 aa12.61□□□□□ -0.39
CLSTN3-204ENST00000535313 H0YJW9 148 aa12.6□□□□□ -0.39
CLSTN3-204ENST00000535313 RRHO14718 337 aa12.6□□□□□ -0.39
CLSTN3-204ENST00000535313 ECI1P42126 302 aa12.6□□□□□ -0.39
CLSTN3-204ENST00000535313 CLDN12P56749 244 aa12.6□□□□□ -0.39
CLSTN3-204ENST00000535313 RUNX1Q01196 453 aa12.6□□□□□ -0.39
CLSTN3-204ENST00000535313 ZNF616Q08AN1 781 aa12.6□□□□□ -0.39
CLSTN3-204ENST00000535313 KIAA0141Q14154 515 aaPredicted RBP12.6□□□□□ -0.39
CLSTN3-204ENST00000535313 ECSCRQ19T08 205 aa12.6□□□□□ -0.39
CLSTN3-204ENST00000535313 ZNF260Q3ZCT1 412 aa12.6□□□□□ -0.39
CLSTN3-204ENST00000535313 MINDY2Q8NBR6 621 aa12.6□□□□□ -0.39
CLSTN3-204ENST00000535313 OR56B1Q8NGI3 324 aa12.6□□□□□ -0.39
CLSTN3-204ENST00000535313 ABHD5Q8WTS1 349 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms