RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 CROCCP3Q8IVE0 287 aa9.9□□□□□ -0.82
USF1-211ENST00000534633 OR52M1Q8NGK5 317 aa9.9□□□□□ -0.82
USF1-211ENST00000534633 RHBDL2Q9NX52 303 aa9.9□□□□□ -0.82
USF1-211ENST00000534633 ABRACLQ9P1F3 81 aa9.9□□□□□ -0.82
USF1-211ENST00000534633 SPATA2Q9UM82 520 aa9.9□□□□□ -0.82
USF1-211ENST00000534633 PSG11Q9UQ72 335 aa9.9□□□□□ -0.82
USF1-211ENST00000534633 CEPT1Q9Y6K0 416 aa9.9□□□□□ -0.82
USF1-211ENST00000534633 IGHV3-43A0A0B4J1X8 118 aa9.89□□□□□ -0.83
USF1-211ENST00000534633 A0A1W2PPE3 182 aa9.89□□□□□ -0.83
USF1-211ENST00000534633 METTL21EPA6NDL7 271 aa9.89□□□□□ -0.83
USF1-211ENST00000534633 TMEM127O75204 238 aa9.89□□□□□ -0.83
USF1-211ENST00000534633 IGHV3-43DP0DP04 118 aa9.89□□□□□ -0.83
USF1-211ENST00000534633 SLC35B1P78383 322 aa9.89□□□□□ -0.83
USF1-211ENST00000534633 ZNF260Q3ZCT1 412 aa9.89□□□□□ -0.83
USF1-211ENST00000534633 SLC35E3Q7Z769 313 aa9.89□□□□□ -0.83
USF1-211ENST00000534633 FOXRED2Q8IWF2 684 aa9.89□□□□□ -0.83
USF1-211ENST00000534633 ZNF439Q8NDP4 499 aa9.89□□□□□ -0.83
USF1-211ENST00000534633 KLHL30-AS1Q8NEE0 82 aa9.89□□□□□ -0.83
USF1-211ENST00000534633 NOL4LQ96MY1 436 aaPredicted RBP9.89□□□□□ -0.83
USF1-211ENST00000534633 P2RX4Q99571 388 aa9.89□□□□□ -0.83
USF1-211ENST00000534633 CMSS1Q9BQ75 279 aaKnown RBP9.89□□□□□ -0.83
USF1-211ENST00000534633 ABCG5Q9H222 651 aa9.89□□□□□ -0.83
USF1-211ENST00000534633 DCSTAMPQ9H295 470 aa9.89□□□□□ -0.83
USF1-211ENST00000534633 RIMS4Q9H426 269 aaPredicted RBP9.89□□□□□ -0.83
USF1-211ENST00000534633 Q9N2K0 584 aa9.89□□□□□ -0.83
USF1-211ENST00000534633 GFOD1Q9NXC2 390 aa9.89□□□□□ -0.83
USF1-211ENST00000534633 SCOCQ9UIL1 159 aa9.89□□□□□ -0.83
USF1-211ENST00000534633 ETV7Q9Y603 341 aa9.89□□□□□ -0.83
USF1-211ENST00000534633 A0A075B6Q4 140 aa9.88□□□□□ -0.83
USF1-211ENST00000534633 IGKV1D-8A0A087WSZ0 117 aa9.88□□□□□ -0.83
USF1-211ENST00000534633 SDCBPO00560 298 aaPredicted RBP9.88□□□□□ -0.83
USF1-211ENST00000534633 SLC31A2O15432 143 aa9.88□□□□□ -0.83
USF1-211ENST00000534633 IGKV1D-33P01593 117 aa9.88□□□□□ -0.83
USF1-211ENST00000534633 IGKV1-33P01594 117 aa9.88□□□□□ -0.83
USF1-211ENST00000534633 GNG10P50151 68 aa9.88□□□□□ -0.83
USF1-211ENST00000534633 TMBIM6P55061 237 aa9.88□□□□□ -0.83
USF1-211ENST00000534633 ZNF816Q0VGE8 651 aaPredicted RBP9.88□□□□□ -0.83
USF1-211ENST00000534633 DIAPH2-AS1Q14236 149 aa9.88□□□□□ -0.83
USF1-211ENST00000534633 GNMTQ14749 295 aa9.88□□□□□ -0.83
USF1-211ENST00000534633 C6orf183Q5T699 404 aa9.88□□□□□ -0.83
USF1-211ENST00000534633 C18orf65Q6ZTR6 163 aa9.88□□□□□ -0.83
USF1-211ENST00000534633 ZNF554Q86TJ5 538 aa9.88□□□□□ -0.83
USF1-211ENST00000534633 ZNF695Q8IW36 515 aa9.88□□□□□ -0.83
USF1-211ENST00000534633 STPG2Q8N412 459 aa9.88□□□□□ -0.83
USF1-211ENST00000534633 PRR18Q8N4B5 295 aa9.88□□□□□ -0.83
USF1-211ENST00000534633 OR52L2PQ8NGH6 319 aa9.88□□□□□ -0.83
USF1-211ENST00000534633 C12orf4Q9NQ89 552 aa9.88□□□□□ -0.83
USF1-211ENST00000534633 ZNF230Q9UIE0 474 aaPredicted RBP9.88□□□□□ -0.83
USF1-211ENST00000534633 LINC00527Q9UJ94 153 aa9.88□□□□□ -0.83
USF1-211ENST00000534633 IGKV1-6A0A0C4DH72 117 aa9.87□□□□□ -0.83
USF1-211ENST00000534633 SPINT2O43291 252 aa9.87□□□□□ -0.83
USF1-211ENST00000534633 SSX5O60225 188 aa9.87□□□□□ -0.83
USF1-211ENST00000534633 RAMP3O60896 148 aa9.87□□□□□ -0.83
USF1-211ENST00000534633 SCTP09683 121 aa9.87□□□□□ -0.83
USF1-211ENST00000534633 RORCP51449 518 aa9.87□□□□□ -0.83
USF1-211ENST00000534633 HTD2P86397 168 aa9.87□□□□□ -0.83
USF1-211ENST00000534633 DGCR2P98153 550 aa9.87□□□□□ -0.83
USF1-211ENST00000534633 EBI3Q14213 229 aa9.87□□□□□ -0.83
USF1-211ENST00000534633 HNF4GQ14541 408 aa9.87□□□□□ -0.83
USF1-211ENST00000534633 MORN2Q502X0 79 aa9.87□□□□□ -0.83
USF1-211ENST00000534633 CT45A1Q5HYN5 189 aa9.87□□□□□ -0.83
USF1-211ENST00000534633 HACD4Q5VWC8 232 aa9.87□□□□□ -0.83
USF1-211ENST00000534633 TRAT1Q6PIZ9 186 aa9.87□□□□□ -0.83
USF1-211ENST00000534633 IZUMO1Q8IYV9 350 aa9.87□□□□□ -0.83
USF1-211ENST00000534633 OR10V1Q8NGI7 309 aa9.87□□□□□ -0.83
USF1-211ENST00000534633 OR10X1Q8NGY0 326 aa9.87□□□□□ -0.83
USF1-211ENST00000534633 CT45A3Q8NHU0 189 aa9.87□□□□□ -0.83
USF1-211ENST00000534633 RAB2BQ8WUD1 216 aa9.87□□□□□ -0.83
USF1-211ENST00000534633 KCTD12Q96CX2 325 aaKnown RBP9.87□□□□□ -0.83
USF1-211ENST00000534633 RBM38Q9H0Z9 239 aaKnown RBP9.87□□□□□ -0.83
USF1-211ENST00000534633 CHMP1AQ9HD42 196 aaPredicted RBP9.87□□□□□ -0.83
USF1-211ENST00000534633 COMMD3Q9UBI1 195 aa9.87□□□□□ -0.83
USF1-211ENST00000534633 DNAH9Q9NYC9 4486 aa9.87□□□□□ -0.83
USF1-211ENST00000534633 TRAV18A0A075B6X5 111 aa9.86□□□□□ -0.83
USF1-211ENST00000534633 TMEM235A6NFC5 223 aa9.86□□□□□ -0.83
USF1-211ENST00000534633 H3BMQ9 156 aa9.86□□□□□ -0.83
USF1-211ENST00000534633 AP4M1O00189 453 aa9.86□□□□□ -0.83
USF1-211ENST00000534633 HSD17B6O14756 317 aa9.86□□□□□ -0.83
USF1-211ENST00000534633 GAPDHP04406 335 aaKnown RBP9.86□□□□□ -0.83
USF1-211ENST00000534633 EIF4EP06730 217 aaKnown RBP9.86□□□□□ -0.83
USF1-211ENST00000534633 FCGR3AP08637 254 aa9.86□□□□□ -0.83
USF1-211ENST00000534633 NHLRC4P0CG21 123 aaPredicted RBP9.86□□□□□ -0.83
USF1-211ENST00000534633 PTHLHP12272 177 aa9.86□□□□□ -0.83
USF1-211ENST00000534633 ZNF182P17025 639 aaPredicted RBP9.86□□□□□ -0.83
USF1-211ENST00000534633 TEX38Q6PEX7 206 aa9.86□□□□□ -0.83
USF1-211ENST00000534633 TGIF2LXQ8IUE1 241 aa9.86□□□□□ -0.83
USF1-211ENST00000534633 LINC00311Q8N616 119 aa9.86□□□□□ -0.83
USF1-211ENST00000534633 SAMD12Q8N8I0 201 aa9.86□□□□□ -0.83
USF1-211ENST00000534633 C8orf31Q8N9H6 132 aa9.86□□□□□ -0.83
USF1-211ENST00000534633 SETD6Q8TBK2 473 aa9.86□□□□□ -0.83
USF1-211ENST00000534633 DYNC2LI1Q8TCX1 351 aa9.86□□□□□ -0.83
USF1-211ENST00000534633 MAFIPQ8WZ33 124 aa9.86□□□□□ -0.83
USF1-211ENST00000534633 ST6GALNAC6Q969X2 333 aa9.86□□□□□ -0.83
USF1-211ENST00000534633 ISOC1Q96CN7 298 aa9.86□□□□□ -0.83
USF1-211ENST00000534633 GON7Q9BXV9 100 aa9.86□□□□□ -0.83
USF1-211ENST00000534633 PARP12Q9H0J9 701 aaKnown RBP9.86□□□□□ -0.83
USF1-211ENST00000534633 OR2S2Q9NQN1 319 aa9.86□□□□□ -0.83
USF1-211ENST00000534633 LIN7CQ9NUP9 197 aaKnown RBP9.86□□□□□ -0.83
USF1-211ENST00000534633 KCNIP1Q9NZI2 227 aa9.86□□□□□ -0.83
USF1-211ENST00000534633 IGHV1-3A0A0C4DH29 117 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 547.8 ms